RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 SLC39A6Q13433 755 aa18.62■□□□□ 0.57
VEGFB-202ENST00000426086 DLEC1Q9Y238 1755 aa18.61■□□□□ 0.57
VEGFB-202ENST00000426086 CARMIL3Q8ND23 1372 aa18.61■□□□□ 0.57
VEGFB-202ENST00000426086 CYP19A1P11511 503 aaPredicted RBP18.61■□□□□ 0.57
VEGFB-202ENST00000426086 TNS4Q8IZW8 715 aa18.61■□□□□ 0.57
VEGFB-202ENST00000426086 GLTPD2A6NH11 291 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 POTECB2RU33 542 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 ZPR1O75312 459 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 IL13P35225 146 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 ZBTB1Q9Y2K1 713 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 CCDC88AQ3V6T2 1871 aa18.6■□□□□ 0.57
VEGFB-202ENST00000426086 NFKBIEO00221 500 aa18.59■□□□□ 0.57
VEGFB-202ENST00000426086 SERPINB2P05120 415 aa18.59■□□□□ 0.57
VEGFB-202ENST00000426086 LMNB1P20700 586 aa18.59■□□□□ 0.57
VEGFB-202ENST00000426086 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
VEGFB-202ENST00000426086 TIAM2Q8IVF5 1701 aa18.59■□□□□ 0.57
VEGFB-202ENST00000426086 COL15A1P39059 1388 aa18.58■□□□□ 0.57
VEGFB-202ENST00000426086 HSPA1AP0DMV8 641 aaKnown RBP18.58■□□□□ 0.56
VEGFB-202ENST00000426086 HSPA1BP0DMV9 641 aaKnown RBP18.58■□□□□ 0.56
VEGFB-202ENST00000426086 MRC1P22897 1456 aa18.58■□□□□ 0.56
VEGFB-202ENST00000426086 ZC3H4Q9UPT8 1303 aaKnown RBP18.57■□□□□ 0.56
VEGFB-202ENST00000426086 VEGFAP15692 232 aaPredicted RBP18.57■□□□□ 0.56
VEGFB-202ENST00000426086 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
VEGFB-202ENST00000426086 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
VEGFB-202ENST00000426086 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
VEGFB-202ENST00000426086 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
VEGFB-202ENST00000426086 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
VEGFB-202ENST00000426086 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
VEGFB-202ENST00000426086 ANKRD31Q8N7Z5 1873 aa18.54■□□□□ 0.56
VEGFB-202ENST00000426086 HSPA5P11021 654 aaKnown RBP18.54■□□□□ 0.56
VEGFB-202ENST00000426086 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
VEGFB-202ENST00000426086 HMOX1P09601 288 aa18.53■□□□□ 0.56
VEGFB-202ENST00000426086 CCDC24Q8N4L8 307 aa18.53■□□□□ 0.56
VEGFB-202ENST00000426086 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
VEGFB-202ENST00000426086 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
VEGFB-202ENST00000426086 UBR2Q8IWV8 1755 aa18.51■□□□□ 0.55
VEGFB-202ENST00000426086 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
VEGFB-202ENST00000426086 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
VEGFB-202ENST00000426086 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
VEGFB-202ENST00000426086 H0YIN7 160 aa18.5■□□□□ 0.55
VEGFB-202ENST00000426086 POTEIP0CG38 1075 aa18.5■□□□□ 0.55
VEGFB-202ENST00000426086 POTEJP0CG39 1038 aa18.5■□□□□ 0.55
VEGFB-202ENST00000426086 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
VEGFB-202ENST00000426086 C21orf2O43822 256 aa18.49■□□□□ 0.55
VEGFB-202ENST00000426086 EIF5P55010 431 aaKnown RBP18.49■□□□□ 0.55
VEGFB-202ENST00000426086 FER1L6Q2WGJ9 1857 aa18.49■□□□□ 0.55
VEGFB-202ENST00000426086 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
VEGFB-202ENST00000426086 ZNF622Q969S3 477 aaKnown RBP eCLIP18.48■□□□□ 0.55
VEGFB-202ENST00000426086 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
VEGFB-202ENST00000426086 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
VEGFB-202ENST00000426086 PRR5LQ6MZQ0 368 aa18.47■□□□□ 0.55
VEGFB-202ENST00000426086 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
VEGFB-202ENST00000426086 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
VEGFB-202ENST00000426086 MKRN1Q9UHC7 482 aaKnown RBP18.46■□□□□ 0.55
VEGFB-202ENST00000426086 TBC1D2BQ9UPU7 963 aa18.46■□□□□ 0.55
VEGFB-202ENST00000426086 SCN7AQ01118 1682 aa18.46■□□□□ 0.55
VEGFB-202ENST00000426086 DDNO94850 711 aaPredicted RBP18.45■□□□□ 0.54
VEGFB-202ENST00000426086 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
VEGFB-202ENST00000426086 DPY19L2Q6NUT2 758 aa18.45■□□□□ 0.54
VEGFB-202ENST00000426086 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
VEGFB-202ENST00000426086 KNSTRNQ9Y448 316 aa18.45■□□□□ 0.54
VEGFB-202ENST00000426086 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
VEGFB-202ENST00000426086 BRIP1Q9BX63 1249 aa18.44■□□□□ 0.54
VEGFB-202ENST00000426086 CHADLQ6NUI6 762 aa18.43■□□□□ 0.54
VEGFB-202ENST00000426086 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
VEGFB-202ENST00000426086 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
VEGFB-202ENST00000426086 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
VEGFB-202ENST00000426086 CREBZFQ9NS37 354 aa18.42■□□□□ 0.54
VEGFB-202ENST00000426086 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
VEGFB-202ENST00000426086 FOXN1O15353 648 aa18.41■□□□□ 0.54
VEGFB-202ENST00000426086 STARD3NLO95772 234 aa18.41■□□□□ 0.54
VEGFB-202ENST00000426086 PDE6BP35913 854 aa18.41■□□□□ 0.54
VEGFB-202ENST00000426086 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
VEGFB-202ENST00000426086 A0A087WZG4 1122 aa18.4■□□□□ 0.54
VEGFB-202ENST00000426086 CAMTA2O94983 1202 aa18.4■□□□□ 0.54
VEGFB-202ENST00000426086 A1BGP04217 495 aa18.4■□□□□ 0.54
VEGFB-202ENST00000426086 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
VEGFB-202ENST00000426086 TAOK3Q9H2K8 898 aa18.4■□□□□ 0.54
VEGFB-202ENST00000426086 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
VEGFB-202ENST00000426086 KCNQ3O43525 872 aa18.39■□□□□ 0.53
VEGFB-202ENST00000426086 PRPF40BQ6NWY9 871 aaKnown RBP18.39■□□□□ 0.53
VEGFB-202ENST00000426086 ZNF790Q6PG37 636 aa18.39■□□□□ 0.53
VEGFB-202ENST00000426086 PCNTO95613 3336 aa18.38■□□□□ 0.53
VEGFB-202ENST00000426086 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
VEGFB-202ENST00000426086 SRGNP10124 158 aa18.38■□□□□ 0.53
VEGFB-202ENST00000426086 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
VEGFB-202ENST00000426086 PASKQ96RG2 1323 aa18.38■□□□□ 0.53
VEGFB-202ENST00000426086 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
VEGFB-202ENST00000426086 IL6STP40189 918 aaPredicted RBP18.37■□□□□ 0.53
VEGFB-202ENST00000426086 CNBD1Q8NA66 436 aa18.37■□□□□ 0.53
VEGFB-202ENST00000426086 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
VEGFB-202ENST00000426086 PDZRN3Q9UPQ7 1066 aa18.37■□□□□ 0.53
VEGFB-202ENST00000426086 COL3A1P02461 1466 aaPredicted RBP18.37■□□□□ 0.53
VEGFB-202ENST00000426086 BCORQ6W2J9 1755 aa18.37■□□□□ 0.53
VEGFB-202ENST00000426086 ARFGEF2Q9Y6D5 1785 aa18.37■□□□□ 0.53
VEGFB-202ENST00000426086 STYK1Q6J9G0 422 aa18.36■□□□□ 0.53
VEGFB-202ENST00000426086 C7orf43Q8WVR3 580 aa18.36■□□□□ 0.53
VEGFB-202ENST00000426086 CNKSR1Q969H4 720 aa18.36■□□□□ 0.53
VEGFB-202ENST00000426086 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms