RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 ITGB4P16144 1822 aa12.13□□□□□ -0.47
HDLBP-211ENST00000425989 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
HDLBP-211ENST00000425989 STARD3NLO95772 234 aa12.12□□□□□ -0.47
HDLBP-211ENST00000425989 KSR2Q6VAB6 950 aa12.12□□□□□ -0.47
HDLBP-211ENST00000425989 MARCH10Q8NA82 808 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-211ENST00000425989 QTRT2Q9H974 415 aaKnown RBP12.12□□□□□ -0.47
HDLBP-211ENST00000425989 IBTKQ9P2D0 1353 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-211ENST00000425989 BCL9O00512 1426 aa12.11□□□□□ -0.47
HDLBP-211ENST00000425989 GNAI3P08754 354 aa12.11□□□□□ -0.47
HDLBP-211ENST00000425989 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
HDLBP-211ENST00000425989 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-211ENST00000425989 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
HDLBP-211ENST00000425989 RPAP2Q8IXW5 612 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-211ENST00000425989 CHPF2Q9P2E5 772 aa12.11□□□□□ -0.47
HDLBP-211ENST00000425989 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
HDLBP-211ENST00000425989 ATRNO75882 1429 aa12.11□□□□□ -0.47
HDLBP-211ENST00000425989 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
HDLBP-211ENST00000425989 ALDH1L1O75891 902 aa12.1□□□□□ -0.47
HDLBP-211ENST00000425989 PDIA6Q15084 440 aa12.1□□□□□ -0.47
HDLBP-211ENST00000425989 G2E3Q7L622 706 aa12.1□□□□□ -0.47
HDLBP-211ENST00000425989 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
HDLBP-211ENST00000425989 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
HDLBP-211ENST00000425989 DNAAF4Q8WXU2 420 aa12.09□□□□□ -0.47
HDLBP-211ENST00000425989 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
HDLBP-211ENST00000425989 SRCIN1Q9C0H9 1055 aa12.09□□□□□ -0.47
HDLBP-211ENST00000425989 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
HDLBP-211ENST00000425989 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
HDLBP-211ENST00000425989 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
HDLBP-211ENST00000425989 TNNQ9UQP3 1299 aa12.08□□□□□ -0.48
HDLBP-211ENST00000425989 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
HDLBP-211ENST00000425989 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
HDLBP-211ENST00000425989 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 GCC1Q96CN9 775 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 ASAP1Q9ULH1 1129 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 PCDHB15Q9Y5E8 787 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
HDLBP-211ENST00000425989 RGS12O14924 1447 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 ATP10DQ9P241 1426 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 HMMRO75330 724 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 GNAI2P04899 355 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 RBM6P78332 1123 aaKnown RBP12.06□□□□□ -0.48
HDLBP-211ENST00000425989 RIC3Q7Z5B4 369 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
HDLBP-211ENST00000425989 LINS1Q8NG48 757 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 PLBD2Q8NHP8 589 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
HDLBP-211ENST00000425989 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
HDLBP-211ENST00000425989 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
HDLBP-211ENST00000425989 LAMB4A4D0S4 1761 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 A0A0G2JS52 829 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 MYT1Q01538 1121 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 BEND3Q5T5X7 828 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 COPS6Q7L5N1 327 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
HDLBP-211ENST00000425989 METTL22Q9BUU2 404 aaPredicted RBP12.05□□□□□ -0.48
HDLBP-211ENST00000425989 THSD7AQ9UPZ6 1657 aa12.04□□□□□ -0.48
HDLBP-211ENST00000425989 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
HDLBP-211ENST00000425989 F6X3S4 739 aa12.04□□□□□ -0.48
HDLBP-211ENST00000425989 LRP10Q7Z4F1 713 aa12.04□□□□□ -0.48
HDLBP-211ENST00000425989 MAP3K2Q9Y2U5 619 aa12.04□□□□□ -0.48
HDLBP-211ENST00000425989 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-211ENST00000425989 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 IGHDP01880 384 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-211ENST00000425989 MYL6BP14649 208 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-211ENST00000425989 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 ANKRD44Q8N8A2 993 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 XAGE3Q8WTP9 111 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 USP44Q9H0E7 712 aa12.03□□□□□ -0.48
HDLBP-211ENST00000425989 GLI3P10071 1580 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 RGL2O15211 777 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 A1BGP04217 495 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 UBTFL1P0CB47 393 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-211ENST00000425989 SIK1P57059 783 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 ATP8B2P98198 1209 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 AIMP1Q12904 312 aaKnown RBP12.02□□□□□ -0.49
HDLBP-211ENST00000425989 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
HDLBP-211ENST00000425989 PROSER3Q2NL68 480 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 HSP90AB3PQ58FF7 597 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-211ENST00000425989 C9orf78Q9NZ63 289 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-211ENST00000425989 C5P01031 1676 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
HDLBP-211ENST00000425989 A0A087WZG4 1122 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 NBPF26B4DH59 902 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 ERVV-1B6SEH8 477 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 ATP6V1AP38606 617 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 RC3H1Q5TC82 1133 aaKnown RBP12.01□□□□□ -0.49
HDLBP-211ENST00000425989 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 NBPF10Q6P3W6 841 aaKnown RBP12.01□□□□□ -0.49
HDLBP-211ENST00000425989 NBPF15Q8N660 670 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 ACSBG1Q96GR2 724 aa12.01□□□□□ -0.49
HDLBP-211ENST00000425989 DCTPP1Q9H773 170 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms