RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RPAP2Q8IXW5 612 aaPredicted RBP19.11■□□□□ 0.65
ACTB-204ENST00000425660 KCPQ6ZWJ8 1503 aa19.11■□□□□ 0.65
ACTB-204ENST00000425660 EXOC5O00471 708 aa19.1■□□□□ 0.65
ACTB-204ENST00000425660 GCC1Q96CN9 775 aa19.1■□□□□ 0.65
ACTB-204ENST00000425660 SPATA31A6Q5VVP1 1343 aa19.1■□□□□ 0.65
ACTB-204ENST00000425660 ADCY9O60503 1353 aa19.1■□□□□ 0.65
ACTB-204ENST00000425660 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 ANXA1P04083 346 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 ANKRD44Q8N8A2 993 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 DNAAF4Q8WXU2 420 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 RGS3P49796 1198 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 CEP85Q6P2H3 762 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 BARGINQ6ZT62 677 aa19.09■□□□□ 0.65
ACTB-204ENST00000425660 GNAI3P08754 354 aa19.08■□□□□ 0.64
ACTB-204ENST00000425660 LRP10Q7Z4F1 713 aa19.08■□□□□ 0.64
ACTB-204ENST00000425660 USP16Q9Y5T5 823 aa19.08■□□□□ 0.64
ACTB-204ENST00000425660 LAMB4A4D0S4 1761 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 PDE4AP27815 886 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 NUCB1Q02818 461 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 BEND3Q5T5X7 828 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 KSR2Q6VAB6 950 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 BACH2Q9BYV9 841 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 TMOD3Q9NYL9 352 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 UNC5CLQ8IV45 518 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 SRCIN1Q9C0H9 1055 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 USP44Q9H0E7 712 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 ERBB4Q15303 1308 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 BCL9LQ86UU0 1499 aa19.07■□□□□ 0.64
ACTB-204ENST00000425660 IBTKQ9P2D0 1353 aaPredicted RBP19.06■□□□□ 0.64
ACTB-204ENST00000425660 FNBP4Q8N3X1 1017 aaPredicted RBP19.06■□□□□ 0.64
ACTB-204ENST00000425660 GNAI2P04899 355 aa19.05■□□□□ 0.64
ACTB-204ENST00000425660 BCL9O00512 1426 aa19.05■□□□□ 0.64
ACTB-204ENST00000425660 DDX58O95786 925 aaKnown RBP19.04■□□□□ 0.64
ACTB-204ENST00000425660 PIGBQ92521 554 aa19.04■□□□□ 0.64
ACTB-204ENST00000425660 DCTPP1Q9H773 170 aa19.04■□□□□ 0.64
ACTB-204ENST00000425660 DDB1Q16531 1140 aa19.04■□□□□ 0.64
ACTB-204ENST00000425660 C8orf37Q96NL8 207 aa19.03■□□□□ 0.64
ACTB-204ENST00000425660 MAP3K2Q9Y2U5 619 aa19.03■□□□□ 0.64
ACTB-204ENST00000425660 ALDH1L1O75891 902 aa19.02■□□□□ 0.64
ACTB-204ENST00000425660 VPS72Q15906 364 aa19.02■□□□□ 0.64
ACTB-204ENST00000425660 FAM161AQ3B820 660 aa19.02■□□□□ 0.64
ACTB-204ENST00000425660 CHD1LQ86WJ1 897 aa19.02■□□□□ 0.64
ACTB-204ENST00000425660 VSIG10Q8N0Z9 540 aa19.02■□□□□ 0.64
ACTB-204ENST00000425660 NGLY1Q96IV0 654 aa19.02■□□□□ 0.63
ACTB-204ENST00000425660 ITGB4P16144 1822 aa19.01■□□□□ 0.63
ACTB-204ENST00000425660 HMMRO75330 724 aa19.01■□□□□ 0.63
ACTB-204ENST00000425660 C8orf34Q49A92 452 aa19.01■□□□□ 0.63
ACTB-204ENST00000425660 UBTFL1P0CB47 393 aaPredicted RBP19■□□□□ 0.63
ACTB-204ENST00000425660 MYL6BP14649 208 aa19■□□□□ 0.63
ACTB-204ENST00000425660 ILDR1Q86SU0 546 aaPredicted RBP19■□□□□ 0.63
ACTB-204ENST00000425660 LINS1Q8NG48 757 aa19■□□□□ 0.63
ACTB-204ENST00000425660 ATG3Q9NT62 314 aa19■□□□□ 0.63
ACTB-204ENST00000425660 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
ACTB-204ENST00000425660 MEX3CQ5U5Q3 659 aaKnown RBP19■□□□□ 0.63
ACTB-204ENST00000425660 COPS6Q7L5N1 327 aa19■□□□□ 0.63
ACTB-204ENST00000425660 XAGE3Q8WTP9 111 aa19■□□□□ 0.63
ACTB-204ENST00000425660 ASAP1Q9ULH1 1129 aa19■□□□□ 0.63
ACTB-204ENST00000425660 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.99■□□□□ 0.63
ACTB-204ENST00000425660 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
ACTB-204ENST00000425660 AIMP1Q12904 312 aaKnown RBP18.98■□□□□ 0.63
ACTB-204ENST00000425660 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
ACTB-204ENST00000425660 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
ACTB-204ENST00000425660 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
ACTB-204ENST00000425660 CCDC9Q9Y3X0 531 aaKnown RBP18.98■□□□□ 0.63
ACTB-204ENST00000425660 NBPF7P0C2Y1 421 aaPredicted RBP18.97■□□□□ 0.63
ACTB-204ENST00000425660 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
ACTB-204ENST00000425660 ANKRD45Q5TZF3 282 aa18.97■□□□□ 0.63
ACTB-204ENST00000425660 ANKRD13DQ6ZTN6 518 aa18.97■□□□□ 0.63
ACTB-204ENST00000425660 MARCH10Q8NA82 808 aaPredicted RBP18.97■□□□□ 0.63
ACTB-204ENST00000425660 TEX13AQ9BXU3 409 aaPredicted RBP18.97■□□□□ 0.63
ACTB-204ENST00000425660 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
ACTB-204ENST00000425660 LRRFIP2Q9Y608 721 aaKnown RBP18.97■□□□□ 0.63
ACTB-204ENST00000425660 UTYO14607 1347 aa18.97■□□□□ 0.63
ACTB-204ENST00000425660 RIC3Q7Z5B4 369 aa18.97■□□□□ 0.63
ACTB-204ENST00000425660 DOT1LQ8TEK3 1739 aa18.96■□□□□ 0.63
ACTB-204ENST00000425660 METTL22Q9BUU2 404 aaPredicted RBP18.96■□□□□ 0.63
ACTB-204ENST00000425660 IGKV5-2P06315 115 aa18.95■□□□□ 0.62
ACTB-204ENST00000425660 PIP4K2AP48426 406 aaPredicted RBP18.95■□□□□ 0.62
ACTB-204ENST00000425660 PRIM1P49642 420 aaKnown RBP18.95■□□□□ 0.62
ACTB-204ENST00000425660 CWF19L2Q2TBE0 894 aaKnown RBP18.95■□□□□ 0.62
ACTB-204ENST00000425660 PLBD2Q8NHP8 589 aa18.95■□□□□ 0.62
ACTB-204ENST00000425660 HDAC5Q9UQL6 1122 aa18.95■□□□□ 0.62
ACTB-204ENST00000425660 PNMA6EA0A0J9YXQ4 647 aa18.94■□□□□ 0.62
ACTB-204ENST00000425660 NEXNQ0ZGT2 675 aa18.94■□□□□ 0.62
ACTB-204ENST00000425660 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
ACTB-204ENST00000425660 USP21Q9UK80 565 aa18.94■□□□□ 0.62
ACTB-204ENST00000425660 A1BGP04217 495 aa18.93■□□□□ 0.62
ACTB-204ENST00000425660 MTX1Q13505 466 aa18.93■□□□□ 0.62
ACTB-204ENST00000425660 FAM98CQ17RN3 349 aaKnown RBP18.93■□□□□ 0.62
ACTB-204ENST00000425660 NEURL1BA8MQ27 555 aa18.93■□□□□ 0.62
ACTB-204ENST00000425660 GRM8O00222 908 aa18.93■□□□□ 0.62
ACTB-204ENST00000425660 POLA2Q14181 598 aa18.92■□□□□ 0.62
ACTB-204ENST00000425660 SLC4A9Q96Q91 983 aa18.92■□□□□ 0.62
ACTB-204ENST00000425660 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
ACTB-204ENST00000425660 STARD3NLO95772 234 aa18.91■□□□□ 0.62
ACTB-204ENST00000425660 DNAJC10Q8IXB1 793 aa18.91■□□□□ 0.62
ACTB-204ENST00000425660 SYTL4Q96C24 671 aaPredicted RBP18.91■□□□□ 0.62
ACTB-204ENST00000425660 ARFGEF2Q9Y6D5 1785 aa18.91■□□□□ 0.62
ACTB-204ENST00000425660 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms