RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 HSPA4P34932 840 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 CEBPAP49715 358 aaPredicted RBP9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 RASEFQ8IZ41 740 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 SOS1Q07889 1333 aaPredicted RBP9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 FIBPO43427 364 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 PHF14O94880 888 aa9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 NBPF7P0C2Y1 421 aaPredicted RBP9.08□□□□□ -0.96
SMARCC1-202ENST00000425518 CSPP1Q1MSJ5 1256 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 USP25Q9UHP3 1055 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 SMC3Q9UQE7 1217 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 SNX14Q9Y5W7 946 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 TNRQ92752 1358 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 IGSF1Q8N6C5 1336 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 AK2P54819 239 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 SSH3Q8TE77 659 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 SBNO1A3KN83 1393 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 TMEM2Q9UHN6 1383 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 CNTROBQ8N137 903 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 ABTB2Q8N961 1025 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 USP31Q70CQ4 1352 aa9.07□□□□□ -0.96
SMARCC1-202ENST00000425518 PI4KAP2A4QPH2 592 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 SGSM2O43147 1006 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 HTATSF1O43719 755 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 RAB11FIP3O75154 756 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 PI4KAP1Q8N8J0 262 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 KIF1BPQ96EK5 621 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.06□□□□□ -0.967e-7■■□□□ 14.4
SMARCC1-202ENST00000425518 HCLS1P14317 486 aaPredicted RBP9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 CASTP20810 708 aaKnown RBP9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 SYT1P21579 422 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 MCM5P33992 734 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 DIAPH3Q9NSV4 1193 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 EID1Q9Y6B2 187 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 TSPOAP1O95153 1857 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 STX6O43752 255 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 ZSCAN22P10073 491 aaPredicted RBP9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 HOXC9P31274 260 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 CCDC83Q8IWF9 413 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 PI4K2BQ8TCG2 481 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 LIMCH1Q9UPQ0 1083 aa9.06□□□□□ -0.96
SMARCC1-202ENST00000425518 KIAA2012Q0VF49 1180 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 RUFY3Q7L099 469 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 CHPF2Q9P2E5 772 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 TECPR2O15040 1411 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 SPATA31D1Q6ZQQ2 1576 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 TTC12Q9H892 705 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 LGR6Q9HBX8 967 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 KCNQ3O43525 872 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 ADCY5O95622 1261 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 KCNJ4P48050 445 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 TERF1P54274 439 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 CCDC183Q5T5S1 534 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 PRPF40BQ6NWY9 871 aaKnown RBP9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 GIMAP6Q6P9H5 292 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 C17orf53Q8N3J3 647 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 LSG1Q9H089 658 aaKnown RBP9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 RAD50Q92878 1312 aa9.05□□□□□ -0.96
SMARCC1-202ENST00000425518 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 DNAAF4Q8WXU2 420 aa9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 JAKMIP1Q96N16 626 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 KDRP35968 1356 aa9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 CEP170BQ9Y4F5 1589 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 SSH2Q76I76 1423 aa9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 LARGE1O95461 756 aa9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 PDRG1Q9NUG6 133 aa9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 C9orf78Q9NZ63 289 aaPredicted RBP9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 PA2G4Q9UQ80 394 aaKnown RBP9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 C3P01024 1663 aa9.04□□□□□ -0.96
SMARCC1-202ENST00000425518 MAP3K5Q99683 1374 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 ADAMTS13Q76LX8 1427 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 NRXN3Q9Y4C0 1643 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 F13A1P00488 732 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 GJB2P29033 226 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 PTH1RQ03431 593 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 DNM1Q05193 864 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 POLA2Q14181 598 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 SASS6Q6UVJ0 657 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 CLASRPQ8N2M8 674 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 NECAB1Q8N987 351 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 AOX1Q06278 1338 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 UBE2HP62256 183 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 TTC14Q96N46 770 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 RPAP1Q9BWH6 1393 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 IFIT2P09913 472 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 TEFQ10587 303 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 ADCK5Q3MIX3 580 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 FAM184AQ8NB25 1140 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 ATP6V1DQ9Y5K8 247 aa9.03□□□□□ -0.96
SMARCC1-202ENST00000425518 MON2Q7Z3U7 1717 aa9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 GLRX3O76003 335 aaKnown RBP9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 HSP90AB4PQ58FF6 505 aa9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 BEND3Q5T5X7 828 aa9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 MPRIPQ6WCQ1 1025 aa9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 FERMT3Q86UX7 667 aa9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 TSC1Q92574 1164 aa9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 JARID2Q92833 1246 aaPredicted RBP9.02□□□□□ -0.96
SMARCC1-202ENST00000425518 PKNOX2Q96KN3 472 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms