RNA–Protein interactions for RNA: ENST00000424536.2

GRAMD1A-203, Transcript of GRAM domain containing 1A, humanhuman

TSL 2 BASIC

Gene GRAMD1A, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-203ENST00000424536 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
GRAMD1A-203ENST00000424536 PLEKHF1Q96S99 279 aa18.11■□□□□ 0.49
GRAMD1A-203ENST00000424536 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
GRAMD1A-203ENST00000424536 SOS1Q07889 1333 aaPredicted RBP18.11■□□□□ 0.49
GRAMD1A-203ENST00000424536 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
GRAMD1A-203ENST00000424536 NLGN2Q8NFZ4 835 aa18.1■□□□□ 0.49
GRAMD1A-203ENST00000424536 COL15A1P39059 1388 aa18.09■□□□□ 0.49
GRAMD1A-203ENST00000424536 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
GRAMD1A-203ENST00000424536 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
GRAMD1A-203ENST00000424536 NARFQ9UHQ1 456 aa18.09■□□□□ 0.49
GRAMD1A-203ENST00000424536 ZBTB1Q9Y2K1 713 aa18.09■□□□□ 0.49
GRAMD1A-203ENST00000424536 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
GRAMD1A-203ENST00000424536 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
GRAMD1A-203ENST00000424536 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
GRAMD1A-203ENST00000424536 TGFB2P61812 414 aa18.07■□□□□ 0.48
GRAMD1A-203ENST00000424536 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
GRAMD1A-203ENST00000424536 SRP68Q9UHB9 627 aaKnown RBP18.06■□□□□ 0.48
GRAMD1A-203ENST00000424536 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
GRAMD1A-203ENST00000424536 EIF5P55010 431 aaKnown RBP18.05■□□□□ 0.48
GRAMD1A-203ENST00000424536 RIPK4P57078 832 aa18.05■□□□□ 0.48
GRAMD1A-203ENST00000424536 USPL1Q5W0Q7 1092 aa18.05■□□□□ 0.48
GRAMD1A-203ENST00000424536 FKBP8Q14318 412 aa18.04■□□□□ 0.48
GRAMD1A-203ENST00000424536 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
GRAMD1A-203ENST00000424536 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
GRAMD1A-203ENST00000424536 CHD4Q14839 1912 aa18.04■□□□□ 0.48
GRAMD1A-203ENST00000424536 KCNQ3O43525 872 aa18.03■□□□□ 0.48
GRAMD1A-203ENST00000424536 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
GRAMD1A-203ENST00000424536 TM4SF1P30408 202 aa18.02■□□□□ 0.48
GRAMD1A-203ENST00000424536 TMPOP42166 694 aaKnown RBP18.02■□□□□ 0.48
GRAMD1A-203ENST00000424536 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
GRAMD1A-203ENST00000424536 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
GRAMD1A-203ENST00000424536 A1BGP04217 495 aa18■□□□□ 0.47
GRAMD1A-203ENST00000424536 KIF13BQ9NQT8 1826 aa18■□□□□ 0.47
GRAMD1A-203ENST00000424536 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 ANP32CO43423 234 aa17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 ZNF652Q9Y2D9 606 aa17.99■□□□□ 0.47
GRAMD1A-203ENST00000424536 YBX3P16989 372 aaKnown RBP eCLIP17.98■□□□□ 0.474e-6■□□□□ 8.3
GRAMD1A-203ENST00000424536 NFIXQ14938 502 aa17.98■□□□□ 0.47
GRAMD1A-203ENST00000424536 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
GRAMD1A-203ENST00000424536 RGL2O15211 777 aa17.97■□□□□ 0.47
GRAMD1A-203ENST00000424536 SERPINB2P05120 415 aa17.97■□□□□ 0.47
GRAMD1A-203ENST00000424536 EIF4A1P60842 406 aaKnown RBP17.97■□□□□ 0.47
GRAMD1A-203ENST00000424536 DDR1Q08345 913 aa17.97■□□□□ 0.47
GRAMD1A-203ENST00000424536 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
GRAMD1A-203ENST00000424536 TBC1D2BQ9UPU7 963 aa17.97■□□□□ 0.47
GRAMD1A-203ENST00000424536 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 NPHP1O15259 732 aa17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 GIGYF1O75420 1035 aaPredicted RBP17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 SETDB2Q96T68 719 aa17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 THUMPD2Q9BTF0 503 aaKnown RBP17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 PIM2Q9P1W9 311 aa17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
GRAMD1A-203ENST00000424536 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
GRAMD1A-203ENST00000424536 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
GRAMD1A-203ENST00000424536 DPEP1P16444 411 aa17.95■□□□□ 0.46
GRAMD1A-203ENST00000424536 CALD1Q05682 793 aaKnown RBP17.95■□□□□ 0.46
GRAMD1A-203ENST00000424536 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
GRAMD1A-203ENST00000424536 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 PRAMEF22A3QJZ6 481 aa17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
GRAMD1A-203ENST00000424536 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
GRAMD1A-203ENST00000424536 CAMTA2O94983 1202 aa17.93■□□□□ 0.46
GRAMD1A-203ENST00000424536 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
GRAMD1A-203ENST00000424536 DALRD3Q5D0E6 543 aaKnown RBP17.92■□□□□ 0.46
GRAMD1A-203ENST00000424536 TBC1D9BQ66K14 1250 aa17.92■□□□□ 0.46
GRAMD1A-203ENST00000424536 PDE6BP35913 854 aa17.91■□□□□ 0.46
GRAMD1A-203ENST00000424536 ST5P78524 1137 aa17.91■□□□□ 0.46
GRAMD1A-203ENST00000424536 KIF6Q6ZMV9 814 aa17.91■□□□□ 0.46
GRAMD1A-203ENST00000424536 NRXN2Q9P2S2 1712 aa17.9■□□□□ 0.46
GRAMD1A-203ENST00000424536 H0YIN7 160 aa17.9■□□□□ 0.46
GRAMD1A-203ENST00000424536 ZNF784Q8NCA9 323 aaPredicted RBP17.9■□□□□ 0.46
GRAMD1A-203ENST00000424536 WWC3Q9ULE0 1092 aa17.9■□□□□ 0.46
GRAMD1A-203ENST00000424536 LAS1LQ9Y4W2 734 aaKnown RBP17.9■□□□□ 0.46
GRAMD1A-203ENST00000424536 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
GRAMD1A-203ENST00000424536 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 ERVV-1B6SEH8 477 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 PIP4K2AP48426 406 aaPredicted RBP17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 CNBD1Q8NA66 436 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 TRIM35Q9UPQ4 493 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 KIAA1551Q9HCM1 1747 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
GRAMD1A-203ENST00000424536 CHL1O00533 1208 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 APAF1O14727 1248 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 TPTE2Q6XPS3 522 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 BRIP1Q9BX63 1249 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 CHMP4AQ9BY43 222 aa17.88■□□□□ 0.45
GRAMD1A-203ENST00000424536 KCNA3P22001 575 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms