RNA–Protein interactions for RNA: ENST00000423693.5

HDLBP-210, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-210ENST00000423693 TRAPPC3LQ5T215 181 aa16.86■□□□□ 0.29
HDLBP-210ENST00000423693 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
HDLBP-210ENST00000423693 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
HDLBP-210ENST00000423693 COL23A1Q86Y22 540 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-210ENST00000423693 MTFR1LQ9H019 292 aa16.84■□□□□ 0.29
HDLBP-210ENST00000423693 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
HDLBP-210ENST00000423693 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
HDLBP-210ENST00000423693 UBR3Q6ZT12 1888 aa16.84■□□□□ 0.29
HDLBP-210ENST00000423693 HOXB7P09629 217 aa16.83■□□□□ 0.28
HDLBP-210ENST00000423693 CASZ1Q86V15 1759 aa16.83■□□□□ 0.28
HDLBP-210ENST00000423693 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-210ENST00000423693 A0A087WZG4 1122 aa16.82■□□□□ 0.28
HDLBP-210ENST00000423693 IL6STP40189 918 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-210ENST00000423693 PDGFDQ9GZP0 370 aaPredicted RBP16.82■□□□□ 0.28
HDLBP-210ENST00000423693 SPON1Q9HCB6 807 aa16.82■□□□□ 0.28
HDLBP-210ENST00000423693 ZBTB1Q9Y2K1 713 aa16.82■□□□□ 0.28
HDLBP-210ENST00000423693 MYH14Q7Z406 1995 aaKnown RBP16.82■□□□□ 0.28
HDLBP-210ENST00000423693 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 PRAMEF22A3QJZ6 481 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 MSH5O43196 834 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 PHF14O94880 888 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 RFC4P35249 363 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 AMIGO3Q86WK7 504 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
HDLBP-210ENST00000423693 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 SALL2Q9Y467 1007 aaPredicted RBP16.81■□□□□ 0.28
HDLBP-210ENST00000423693 TUBGCP6Q96RT7 1819 aa16.81■□□□□ 0.28
HDLBP-210ENST00000423693 ZNF521Q96K83 1311 aa16.8■□□□□ 0.28
HDLBP-210ENST00000423693 A1BGP04217 495 aa16.8■□□□□ 0.28
HDLBP-210ENST00000423693 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
HDLBP-210ENST00000423693 EIF5P55010 431 aaKnown RBP16.8■□□□□ 0.28
HDLBP-210ENST00000423693 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
HDLBP-210ENST00000423693 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
HDLBP-210ENST00000423693 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
HDLBP-210ENST00000423693 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
HDLBP-210ENST00000423693 COL15A1P39059 1388 aa16.77■□□□□ 0.28
HDLBP-210ENST00000423693 ZPR1O75312 459 aa16.77■□□□□ 0.28
HDLBP-210ENST00000423693 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.28
HDLBP-210ENST00000423693 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
HDLBP-210ENST00000423693 NARFQ9UHQ1 456 aa16.77■□□□□ 0.28
HDLBP-210ENST00000423693 LAMB4A4D0S4 1761 aa16.77■□□□□ 0.27
HDLBP-210ENST00000423693 NBPF26B4DH59 902 aa16.76■□□□□ 0.27
HDLBP-210ENST00000423693 POLD1P28340 1107 aa16.76■□□□□ 0.27
HDLBP-210ENST00000423693 GOLGA2Q08379 1002 aa16.76■□□□□ 0.27
HDLBP-210ENST00000423693 NBPF10Q6P3W6 841 aaKnown RBP16.76■□□□□ 0.27
HDLBP-210ENST00000423693 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
HDLBP-210ENST00000423693 NBPF15Q8N660 670 aa16.76■□□□□ 0.27
HDLBP-210ENST00000423693 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
HDLBP-210ENST00000423693 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
HDLBP-210ENST00000423693 LRP5O75197 1615 aa16.75■□□□□ 0.27
HDLBP-210ENST00000423693 RGL2O15211 777 aa16.75■□□□□ 0.27
HDLBP-210ENST00000423693 PTGER2P43116 358 aa16.75■□□□□ 0.27
HDLBP-210ENST00000423693 TSR2Q969E8 191 aaKnown RBP16.75■□□□□ 0.27
HDLBP-210ENST00000423693 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
HDLBP-210ENST00000423693 FANCIQ9NVI1 1328 aa16.74■□□□□ 0.27
HDLBP-210ENST00000423693 E9PSI1 815 aa16.74■□□□□ 0.27
HDLBP-210ENST00000423693 GYS1P13807 737 aa16.74■□□□□ 0.27
HDLBP-210ENST00000423693 EIF2S2P20042 333 aaKnown RBP16.74■□□□□ 0.27
HDLBP-210ENST00000423693 KRT24Q2M2I5 525 aa16.74■□□□□ 0.27
HDLBP-210ENST00000423693 COL24A1Q17RW2 1714 aa16.73■□□□□ 0.27
HDLBP-210ENST00000423693 HDGFL1Q5TGJ6 251 aa16.73■□□□□ 0.27
HDLBP-210ENST00000423693 C8orf58Q8NAV2 365 aa16.73■□□□□ 0.27
HDLBP-210ENST00000423693 DDX21Q9NR30 783 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDLBP-210ENST00000423693 PDIA6Q15084 440 aa16.72■□□□□ 0.27
HDLBP-210ENST00000423693 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-210ENST00000423693 DBF4Q9UBU7 674 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-210ENST00000423693 ZNF330Q9Y3S2 320 aaPredicted RBP16.72■□□□□ 0.27
HDLBP-210ENST00000423693 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
HDLBP-210ENST00000423693 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
HDLBP-210ENST00000423693 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
HDLBP-210ENST00000423693 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
HDLBP-210ENST00000423693 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
HDLBP-210ENST00000423693 SRP68Q9UHB9 627 aaKnown RBP16.71■□□□□ 0.27
HDLBP-210ENST00000423693 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-210ENST00000423693 PIP4K2AP48426 406 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-210ENST00000423693 SLFN5Q08AF3 891 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 MSL1Q68DK7 614 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 ARXQ96QS3 562 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 PPP1R1BQ9UD71 204 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-210ENST00000423693 TBC1D2BQ9UPU7 963 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 ZNF652Q9Y2D9 606 aa16.7■□□□□ 0.26
HDLBP-210ENST00000423693 CAMTA2O94983 1202 aa16.69■□□□□ 0.26
HDLBP-210ENST00000423693 MYL6BP14649 208 aa16.69■□□□□ 0.26
HDLBP-210ENST00000423693 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■□□□□ 8.9
HDLBP-210ENST00000423693 FKBP8Q14318 412 aa16.69■□□□□ 0.26
HDLBP-210ENST00000423693 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
HDLBP-210ENST00000423693 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
HDLBP-210ENST00000423693 BCL2L12Q9HB09 334 aa16.69■□□□□ 0.26
HDLBP-210ENST00000423693 TM4SF1P30408 202 aa16.68■□□□□ 0.26
HDLBP-210ENST00000423693 EXOSC9Q06265 439 aaKnown RBP16.68■□□□□ 0.26
HDLBP-210ENST00000423693 KIF6Q6ZMV9 814 aa16.68■□□□□ 0.26
HDLBP-210ENST00000423693 TRMT2AQ8IZ69 625 aaKnown RBP16.68■□□□□ 0.26
HDLBP-210ENST00000423693 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
HDLBP-210ENST00000423693 CHPF2Q9P2E5 772 aa16.68■□□□□ 0.26
HDLBP-210ENST00000423693 VAMP4O75379 141 aa16.67■□□□□ 0.26
HDLBP-210ENST00000423693 MMP10P09238 476 aa16.67■□□□□ 0.26
HDLBP-210ENST00000423693 PARP3Q9Y6F1 533 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms