RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 HMMRO75330 724 aa28.59■■■□□ 2.17
LSM8-203ENST00000422760 IL2RBP14784 551 aa28.59■■■□□ 2.17
LSM8-203ENST00000422760 ZCRB1Q8TBF4 217 aaKnown RBP28.59■■■□□ 2.17
LSM8-203ENST00000422760 PI4KAP2A4QPH2 592 aa28.58■■■□□ 2.17
LSM8-203ENST00000422760 EVA1CP58658 441 aa28.58■■■□□ 2.17
LSM8-203ENST00000422760 PI4KAP1Q8N8J0 262 aa28.58■■■□□ 2.17
LSM8-203ENST00000422760 DNAAF4Q8WXU2 420 aa28.58■■■□□ 2.17
LSM8-203ENST00000422760 COL14A1Q05707 1796 aaKnown RBP28.58■■■□□ 2.17
LSM8-203ENST00000422760 SRCIN1Q9C0H9 1055 aa28.57■■■□□ 2.16
LSM8-203ENST00000422760 USP44Q9H0E7 712 aa28.57■■■□□ 2.16
LSM8-203ENST00000422760 GLI3P10071 1580 aa28.56■■■□□ 2.16
LSM8-203ENST00000422760 COL16A1Q07092 1604 aaPredicted RBP28.56■■■□□ 2.16
LSM8-203ENST00000422760 MFAP1P55081 439 aaKnown RBP28.55■■■□□ 2.16
LSM8-203ENST00000422760 CABP4P57796 275 aa28.55■■■□□ 2.16
LSM8-203ENST00000422760 SNX21Q969T3 373 aa28.55■■■□□ 2.16
LSM8-203ENST00000422760 ZNF496Q96IT1 587 aaPredicted RBP28.55■■■□□ 2.16
LSM8-203ENST00000422760 TTC5Q8N0Z6 440 aa28.55■■■□□ 2.16
LSM8-203ENST00000422760 BEND3Q5T5X7 828 aa28.54■■■□□ 2.16
LSM8-203ENST00000422760 HYPKQ9NX55 129 aa28.54■■■□□ 2.16
LSM8-203ENST00000422760 LRRFIP2Q9Y608 721 aaKnown RBP28.54■■■□□ 2.16
LSM8-203ENST00000422760 UBTFL1P0CB47 393 aaPredicted RBP28.53■■■□□ 2.16
LSM8-203ENST00000422760 DDX21Q9NR30 783 aaKnown RBP eCLIP28.53■■■□□ 2.16
LSM8-203ENST00000422760 LAMB4A4D0S4 1761 aa28.53■■■□□ 2.16
LSM8-203ENST00000422760 HSCBQ8IWL3 235 aa28.53■■■□□ 2.16
LSM8-203ENST00000422760 BTG4Q9NY30 223 aa28.53■■■□□ 2.16
LSM8-203ENST00000422760 CHMP5Q9NZZ3 219 aa28.52■■■□□ 2.16
LSM8-203ENST00000422760 PDIA6Q15084 440 aa28.51■■■□□ 2.16
LSM8-203ENST00000422760 UBR2Q8IWV8 1755 aa28.51■■■□□ 2.15
LSM8-203ENST00000422760 SLKQ9H2G2 1235 aaPredicted RBP28.51■■■□□ 2.15
LSM8-203ENST00000422760 PAPPAQ13219 1627 aa28.5■■■□□ 2.15
LSM8-203ENST00000422760 FMNL2Q96PY5 1086 aa28.5■■■□□ 2.15
LSM8-203ENST00000422760 MAP3K2Q9Y2U5 619 aa28.5■■■□□ 2.15
LSM8-203ENST00000422760 PHLPP1O60346 1717 aa28.5■■■□□ 2.15
LSM8-203ENST00000422760 PNMA6EA0A0J9YXQ4 647 aa28.49■■■□□ 2.15
LSM8-203ENST00000422760 KSR2Q6VAB6 950 aa28.49■■■□□ 2.15
LSM8-203ENST00000422760 APBB1O00213 710 aa28.49■■■□□ 2.15
LSM8-203ENST00000422760 ATP8B2P98198 1209 aa28.49■■■□□ 2.15
LSM8-203ENST00000422760 NKX1-1Q15270 411 aaPredicted RBP28.49■■■□□ 2.15
LSM8-203ENST00000422760 TOGARAM1Q9Y4F4 1720 aa28.48■■■□□ 2.15
LSM8-203ENST00000422760 SNRPA1P09661 255 aaKnown RBP28.48■■■□□ 2.15
LSM8-203ENST00000422760 PLEKHM2Q8IWE5 1019 aa28.48■■■□□ 2.15
LSM8-203ENST00000422760 ERVV-2B6SEH9 535 aa28.47■■■□□ 2.15
LSM8-203ENST00000422760 SMARCA5O60264 1052 aaPredicted RBP28.47■■■□□ 2.15
LSM8-203ENST00000422760 DDX54Q8TDD1 881 aaKnown RBP28.46■■■□□ 2.15
LSM8-203ENST00000422760 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
LSM8-203ENST00000422760 NBPF7P0C2Y1 421 aaPredicted RBP28.45■■■□□ 2.15
LSM8-203ENST00000422760 C16orf71Q8IYS4 520 aaPredicted RBP28.45■■■□□ 2.15
LSM8-203ENST00000422760 DDX58O95786 925 aaKnown RBP28.45■■■□□ 2.14
LSM8-203ENST00000422760 CIZ1Q9ULV3 898 aaPredicted RBP28.45■■■□□ 2.14
LSM8-203ENST00000422760 EXOC6BQ9Y2D4 811 aa28.45■■■□□ 2.14
LSM8-203ENST00000422760 OTUD7AQ8TE49 926 aaPredicted RBP28.44■■■□□ 2.14
LSM8-203ENST00000422760 USP16Q9Y5T5 823 aa28.44■■■□□ 2.14
LSM8-203ENST00000422760 ALDH1L1O75891 902 aa28.43■■■□□ 2.14
LSM8-203ENST00000422760 MYL6BP14649 208 aa28.43■■■□□ 2.14
LSM8-203ENST00000422760 AIMP1Q12904 312 aaKnown RBP28.43■■■□□ 2.14
LSM8-203ENST00000422760 KCPQ6ZWJ8 1503 aa28.42■■■□□ 2.14
LSM8-203ENST00000422760 WNK3Q9BYP7 1800 aa28.42■■■□□ 2.14
LSM8-203ENST00000422760 DISP2A7MBM2 1401 aa28.42■■■□□ 2.14
LSM8-203ENST00000422760 GSPT1P15170 499 aaKnown RBP28.41■■■□□ 2.14
LSM8-203ENST00000422760 IBTKQ9P2D0 1353 aaPredicted RBP28.41■■■□□ 2.14
LSM8-203ENST00000422760 CDC45O75419 566 aa28.4■■■□□ 2.14
LSM8-203ENST00000422760 TTC22Q5TAA0 569 aa28.4■■■□□ 2.14
LSM8-203ENST00000422760 LRP10Q7Z4F1 713 aa28.4■■■□□ 2.14
LSM8-203ENST00000422760 SSH3Q8TE77 659 aa28.4■■■□□ 2.14
LSM8-203ENST00000422760 CWF19L2Q2TBE0 894 aaKnown RBP28.39■■■□□ 2.14
LSM8-203ENST00000422760 L1TD1Q5T7N2 865 aaKnown RBP28.39■■■□□ 2.14
LSM8-203ENST00000422760 LINS1Q8NG48 757 aa28.39■■■□□ 2.14
LSM8-203ENST00000422760 XAGE3Q8WTP9 111 aa28.39■■■□□ 2.14
LSM8-203ENST00000422760 PPP1R42Q7Z4L9 355 aa28.39■■■□□ 2.13
LSM8-203ENST00000422760 TNS2Q63HR2 1409 aa28.39■■■□□ 2.13
LSM8-203ENST00000422760 POLA2Q14181 598 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 LRRCC1Q9C099 1032 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 ARFGEF2Q9Y6D5 1785 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 PTMSP20962 102 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 MCM4P33991 863 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 COPS6Q7L5N1 327 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 RIC3Q7Z5B4 369 aa28.37■■■□□ 2.13
LSM8-203ENST00000422760 PIP4K2AP48426 406 aaPredicted RBP28.36■■■□□ 2.13
LSM8-203ENST00000422760 C9orf78Q9NZ63 289 aaPredicted RBP28.36■■■□□ 2.13
LSM8-203ENST00000422760 NRAPQ86VF7 1730 aa28.36■■■□□ 2.13
LSM8-203ENST00000422760 DDX11L8A8MPP1 907 aa28.35■■■□□ 2.13
LSM8-203ENST00000422760 SRGAP3O43295 1099 aa28.35■■■□□ 2.13
LSM8-203ENST00000422760 TBC1D9Q6ZT07 1266 aa28.35■■■□□ 2.13
LSM8-203ENST00000422760 ITGB4P16144 1822 aa28.34■■■□□ 2.13
LSM8-203ENST00000422760 DDIT3P35638 169 aa28.33■■■□□ 2.13
LSM8-203ENST00000422760 ERBB4Q15303 1308 aa28.32■■■□□ 2.12
LSM8-203ENST00000422760 GRM8O00222 908 aa28.32■■■□□ 2.12
LSM8-203ENST00000422760 IGKV5-2P06315 115 aa28.32■■■□□ 2.12
LSM8-203ENST00000422760 AFDNP55196 1824 aaKnown RBP28.32■■■□□ 2.12
LSM8-203ENST00000422760 TUBGCP6Q96RT7 1819 aa28.32■■■□□ 2.12
LSM8-203ENST00000422760 UTYO14607 1347 aa28.32■■■□□ 2.12
LSM8-203ENST00000422760 SALL3Q9BXA9 1300 aa28.32■■■□□ 2.12
LSM8-203ENST00000422760 MTX1Q13505 466 aa28.31■■■□□ 2.12
LSM8-203ENST00000422760 TMOD3Q9NYL9 352 aa28.31■■■□□ 2.12
LSM8-203ENST00000422760 NEXNQ0ZGT2 675 aa28.31■■■□□ 2.12
LSM8-203ENST00000422760 ANKRD13DQ6ZTN6 518 aa28.31■■■□□ 2.12
LSM8-203ENST00000422760 OSBPL3Q9H4L5 887 aa28.31■■■□□ 2.12
LSM8-203ENST00000422760 PTCD1O75127 700 aaKnown RBP28.3■■■□□ 2.12
LSM8-203ENST00000422760 ADAMTS2O95450 1211 aa28.3■■■□□ 2.12
LSM8-203ENST00000422760 PDE1AP54750 535 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms