RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
UBXN11-208ENST00000421827 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
UBXN11-208ENST00000421827 GOLGB1Q14789 3259 aaKnown RBP23.91■■□□□ 1.42
UBXN11-208ENST00000421827 ZPR1O75312 459 aa23.91■■□□□ 1.42
UBXN11-208ENST00000421827 COL15A1P39059 1388 aa23.91■■□□□ 1.42
UBXN11-208ENST00000421827 CANXP27824 592 aaKnown RBP23.9■■□□□ 1.42
UBXN11-208ENST00000421827 FKBP8Q14318 412 aa23.9■■□□□ 1.42
UBXN11-208ENST00000421827 PRKRIP1Q9H875 184 aaPredicted RBP23.9■■□□□ 1.42
UBXN11-208ENST00000421827 PARP3Q9Y6F1 533 aa23.9■■□□□ 1.42
UBXN11-208ENST00000421827 TAF7Q15545 349 aaPredicted RBP23.89■■□□□ 1.41
UBXN11-208ENST00000421827 USPL1Q5W0Q7 1092 aa23.88■■□□□ 1.41
UBXN11-208ENST00000421827 NARFQ9UHQ1 456 aa23.88■■□□□ 1.41
UBXN11-208ENST00000421827 YBX3P16989 372 aaKnown RBP eCLIP23.87■■□□□ 1.41
UBXN11-208ENST00000421827 EIF5P55010 431 aaKnown RBP23.87■■□□□ 1.41
UBXN11-208ENST00000421827 DLG5Q8TDM6 1919 aa23.86■■□□□ 1.41
UBXN11-208ENST00000421827 A0A087WZG4 1122 aa23.85■■□□□ 1.41
UBXN11-208ENST00000421827 GRIN3BO60391 1043 aa23.85■■□□□ 1.41
UBXN11-208ENST00000421827 C10orf71Q711Q0 1435 aa23.84■■□□□ 1.41
UBXN11-208ENST00000421827 SNRPA1P09661 255 aaKnown RBP23.84■■□□□ 1.41
UBXN11-208ENST00000421827 DDR1Q08345 913 aa23.84■■□□□ 1.41
UBXN11-208ENST00000421827 PNISRQ8TF01 805 aaKnown RBP23.84■■□□□ 1.41
UBXN11-208ENST00000421827 MIS18AQ9NYP9 233 aa23.84■■□□□ 1.41
UBXN11-208ENST00000421827 A1BGP04217 495 aa23.83■■□□□ 1.41
UBXN11-208ENST00000421827 TM4SF1P30408 202 aa23.83■■□□□ 1.41
UBXN11-208ENST00000421827 IL6STP40189 918 aaPredicted RBP23.83■■□□□ 1.41
UBXN11-208ENST00000421827 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
UBXN11-208ENST00000421827 THUMPD2Q9BTF0 503 aaKnown RBP23.83■■□□□ 1.41
UBXN11-208ENST00000421827 USP16Q9Y5T5 823 aa23.83■■□□□ 1.41
UBXN11-208ENST00000421827 CHD4Q14839 1912 aa23.82■■□□□ 1.4
UBXN11-208ENST00000421827 PRAMEF22A3QJZ6 481 aa23.82■■□□□ 1.4
UBXN11-208ENST00000421827 RIPK4P57078 832 aa23.82■■□□□ 1.4
UBXN11-208ENST00000421827 TGFB2P61812 414 aa23.82■■□□□ 1.4
UBXN11-208ENST00000421827 ZNF330Q9Y3S2 320 aaPredicted RBP23.82■■□□□ 1.4
UBXN11-208ENST00000421827 KIF13BQ9NQT8 1826 aa23.82■■□□□ 1.4
UBXN11-208ENST00000421827 POLRMTO00411 1230 aaKnown RBP23.81■■□□□ 1.4
UBXN11-208ENST00000421827 BCL2L12Q9HB09 334 aa23.81■■□□□ 1.4
UBXN11-208ENST00000421827 TMPOP42166 694 aaKnown RBP23.8■■□□□ 1.4
UBXN11-208ENST00000421827 NPM2Q86SE8 214 aaKnown RBP23.8■■□□□ 1.4
UBXN11-208ENST00000421827 WWC3Q9ULE0 1092 aa23.8■■□□□ 1.4
UBXN11-208ENST00000421827 PXDNLA1KZ92 1463 aa23.8■■□□□ 1.4
UBXN11-208ENST00000421827 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
UBXN11-208ENST00000421827 NFIXQ14938 502 aa23.79■■□□□ 1.4
UBXN11-208ENST00000421827 CCDC146Q8IYE0 955 aa23.79■■□□□ 1.4
UBXN11-208ENST00000421827 A0A0G2JLW4 131 aa23.78■■□□□ 1.4
UBXN11-208ENST00000421827 RUNDC1Q96C34 613 aa23.78■■□□□ 1.4
UBXN11-208ENST00000421827 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
UBXN11-208ENST00000421827 TBC1D2BQ9UPU7 963 aa23.78■■□□□ 1.4
UBXN11-208ENST00000421827 LMOD3Q0VAK6 560 aa23.77■■□□□ 1.4
UBXN11-208ENST00000421827 KIAA1551Q9HCM1 1747 aa23.76■■□□□ 1.39
UBXN11-208ENST00000421827 DPEP1P16444 411 aa23.76■■□□□ 1.39
UBXN11-208ENST00000421827 PIP4K2AP48426 406 aaPredicted RBP23.76■■□□□ 1.39
UBXN11-208ENST00000421827 RRP7AQ9Y3A4 280 aaKnown RBP23.76■■□□□ 1.39
UBXN11-208ENST00000421827 KDM3BQ7LBC6 1761 aa23.75■■□□□ 1.39
UBXN11-208ENST00000421827 EIF4A1P60842 406 aaKnown RBP23.75■■□□□ 1.39
UBXN11-208ENST00000421827 N4BP2Q86UW6 1770 aaPredicted RBP23.74■■□□□ 1.39
UBXN11-208ENST00000421827 NEUROD2Q15784 382 aa23.74■■□□□ 1.39
UBXN11-208ENST00000421827 GIGYF1O75420 1035 aaPredicted RBP23.73■■□□□ 1.39
UBXN11-208ENST00000421827 SERPINB2P05120 415 aa23.73■■□□□ 1.39
UBXN11-208ENST00000421827 BICDL1Q6ZP65 573 aa23.73■■□□□ 1.39
UBXN11-208ENST00000421827 DZIP3Q86Y13 1208 aaKnown RBP23.73■■□□□ 1.39
UBXN11-208ENST00000421827 ZNF784Q8NCA9 323 aaPredicted RBP23.73■■□□□ 1.39
UBXN11-208ENST00000421827 NBPF26B4DH59 902 aa23.72■■□□□ 1.39
UBXN11-208ENST00000421827 CAMTA2O94983 1202 aa23.72■■□□□ 1.39
UBXN11-208ENST00000421827 TBC1D9BQ66K14 1250 aa23.72■■□□□ 1.39
UBXN11-208ENST00000421827 NBPF10Q6P3W6 841 aaKnown RBP23.72■■□□□ 1.39
UBXN11-208ENST00000421827 NBPF15Q8N660 670 aa23.72■■□□□ 1.39
UBXN11-208ENST00000421827 TSPYL4Q9UJ04 414 aa23.72■■□□□ 1.39
UBXN11-208ENST00000421827 SCN7AQ01118 1682 aa23.72■■□□□ 1.39
UBXN11-208ENST00000421827 KCNA3P22001 575 aa23.71■■□□□ 1.39
UBXN11-208ENST00000421827 BABAM1Q9NWV8 329 aa23.71■■□□□ 1.39
UBXN11-208ENST00000421827 BCS1LQ9Y276 419 aa23.71■■□□□ 1.39
UBXN11-208ENST00000421827 AFDNP55196 1824 aaKnown RBP23.7■■□□□ 1.38
UBXN11-208ENST00000421827 PIM2Q9P1W9 311 aa23.69■■□□□ 1.38
UBXN11-208ENST00000421827 TRIM35Q9UPQ4 493 aa23.69■■□□□ 1.38
UBXN11-208ENST00000421827 NRXN2Q9P2S2 1712 aa23.69■■□□□ 1.38
UBXN11-208ENST00000421827 LAMB4A4D0S4 1761 aa23.68■■□□□ 1.38
UBXN11-208ENST00000421827 CARMIL3Q8ND23 1372 aa23.67■■□□□ 1.38
UBXN11-208ENST00000421827 CHRNA5P30532 468 aa23.67■■□□□ 1.38
UBXN11-208ENST00000421827 CLEC4GQ6UXB4 293 aa23.66■■□□□ 1.38
UBXN11-208ENST00000421827 SETDB2Q96T68 719 aa23.66■■□□□ 1.38
UBXN11-208ENST00000421827 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
UBXN11-208ENST00000421827 DALRD3Q5D0E6 543 aaKnown RBP23.65■■□□□ 1.38
UBXN11-208ENST00000421827 ZNF652Q9Y2D9 606 aa23.65■■□□□ 1.38
UBXN11-208ENST00000421827 BRCA1P38398 1863 aaKnown RBP23.64■■□□□ 1.38
UBXN11-208ENST00000421827 RGL2O15211 777 aa23.64■■□□□ 1.37
UBXN11-208ENST00000421827 CHL1O00533 1208 aa23.63■■□□□ 1.37
UBXN11-208ENST00000421827 CCDC184Q52MB2 194 aa23.63■■□□□ 1.37
UBXN11-208ENST00000421827 APAF1O14727 1248 aa23.62■■□□□ 1.37
UBXN11-208ENST00000421827 ANP32CO43423 234 aa23.62■■□□□ 1.37
UBXN11-208ENST00000421827 PRR5LQ6MZQ0 368 aa23.62■■□□□ 1.37
UBXN11-208ENST00000421827 NGEFQ8N5V2 710 aa23.62■■□□□ 1.37
UBXN11-208ENST00000421827 LAS1LQ9Y4W2 734 aaKnown RBP23.62■■□□□ 1.37
UBXN11-208ENST00000421827 ERBB4Q15303 1308 aa23.61■■□□□ 1.37
UBXN11-208ENST00000421827 ARHGAP27Q6ZUM4 889 aa23.61■■□□□ 1.37
UBXN11-208ENST00000421827 CNBD1Q8NA66 436 aa23.61■■□□□ 1.37
UBXN11-208ENST00000421827 MYL6BP14649 208 aa23.6■■□□□ 1.37
UBXN11-208ENST00000421827 C2CD5Q86YS7 1000 aa23.6■■□□□ 1.37
UBXN11-208ENST00000421827 BRIP1Q9BX63 1249 aa23.6■■□□□ 1.37
UBXN11-208ENST00000421827 H0YIN7 160 aa23.59■■□□□ 1.37
UBXN11-208ENST00000421827 NPHP1O15259 732 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms