RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 REC8O95072 547 aa23.31■■□□□ 1.32
CROCCP3-202ENST00000420820 NBPF7P0C2Y1 421 aaPredicted RBP23.31■■□□□ 1.32
CROCCP3-202ENST00000420820 XIRP1Q702N8 1843 aaKnown RBP23.31■■□□□ 1.32
CROCCP3-202ENST00000420820 NPHP3Q7Z494 1330 aa23.31■■□□□ 1.32
CROCCP3-202ENST00000420820 PPP1R42Q7Z4L9 355 aa23.31■■□□□ 1.32
CROCCP3-202ENST00000420820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.31■■□□□ 1.32
CROCCP3-202ENST00000420820 KDM6AO15550 1401 aaPredicted RBP23.3■■□□□ 1.32
CROCCP3-202ENST00000420820 ANXA1P04083 346 aa23.3■■□□□ 1.32
CROCCP3-202ENST00000420820 CADPS2Q86UW7 1296 aa23.3■■□□□ 1.32
CROCCP3-202ENST00000420820 DDX17Q92841 729 aaKnown RBP23.3■■□□□ 1.32
CROCCP3-202ENST00000420820 PKD1L3Q7Z443 1732 aa23.28■■□□□ 1.32
CROCCP3-202ENST00000420820 ALDH1L1O75891 902 aa23.28■■□□□ 1.32
CROCCP3-202ENST00000420820 PROSER3Q2NL68 480 aa23.28■■□□□ 1.32
CROCCP3-202ENST00000420820 MEGF6O75095 1541 aa23.28■■□□□ 1.32
CROCCP3-202ENST00000420820 MTX1Q13505 466 aa23.27■■□□□ 1.32
CROCCP3-202ENST00000420820 KSR2Q6VAB6 950 aa23.27■■□□□ 1.32
CROCCP3-202ENST00000420820 RAPGEF4Q8WZA2 1011 aa23.27■■□□□ 1.32
CROCCP3-202ENST00000420820 C5P01031 1676 aa23.27■■□□□ 1.32
CROCCP3-202ENST00000420820 TSHZ3Q63HK5 1081 aa23.27■■□□□ 1.32
CROCCP3-202ENST00000420820 MRC1P22897 1456 aa23.27■■□□□ 1.32
CROCCP3-202ENST00000420820 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
CROCCP3-202ENST00000420820 HYPKQ9NX55 129 aa23.26■■□□□ 1.31
CROCCP3-202ENST00000420820 CPDO75976 1380 aa23.26■■□□□ 1.31
CROCCP3-202ENST00000420820 SPATA31A3Q5VYP0 1347 aa23.26■■□□□ 1.31
CROCCP3-202ENST00000420820 PHKG2P15735 406 aa23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 RAB3GAP1Q15042 981 aa23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 AEBP2Q6ZN18 517 aaPredicted RBP23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 SRGAP3O43295 1099 aa23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 SLC52A2Q9HAB3 445 aa23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 DDX21Q9NR30 783 aaKnown RBP eCLIP23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 MAP3K2Q9Y2U5 619 aa23.25■■□□□ 1.31
CROCCP3-202ENST00000420820 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
CROCCP3-202ENST00000420820 TATP17735 454 aaPredicted RBP23.24■■□□□ 1.31
CROCCP3-202ENST00000420820 PDIA6Q15084 440 aa23.24■■□□□ 1.31
CROCCP3-202ENST00000420820 RHPN1Q8TCX5 695 aa23.24■■□□□ 1.31
CROCCP3-202ENST00000420820 ESYT1Q9BSJ8 1104 aa23.24■■□□□ 1.31
CROCCP3-202ENST00000420820 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
CROCCP3-202ENST00000420820 ZNF790Q6PG37 636 aa23.23■■□□□ 1.31
CROCCP3-202ENST00000420820 CHMLP26374 656 aa23.23■■□□□ 1.31
CROCCP3-202ENST00000420820 KIF1BPQ96EK5 621 aa23.23■■□□□ 1.31
CROCCP3-202ENST00000420820 TNPO1Q92973 898 aaKnown RBP23.22■■□□□ 1.31
CROCCP3-202ENST00000420820 IL1RAPL2Q9NP60 686 aa23.22■■□□□ 1.31
CROCCP3-202ENST00000420820 UTYO14607 1347 aa23.22■■□□□ 1.31
CROCCP3-202ENST00000420820 AK9Q5TCS8 1911 aa23.22■■□□□ 1.31
CROCCP3-202ENST00000420820 CABLES1Q8TDN4 633 aa23.21■■□□□ 1.31
CROCCP3-202ENST00000420820 HSP90AB4PQ58FF6 505 aa23.21■■□□□ 1.31
CROCCP3-202ENST00000420820 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
CROCCP3-202ENST00000420820 IL17RAQ96F46 866 aa23.21■■□□□ 1.31
CROCCP3-202ENST00000420820 DDX11L8A8MPP1 907 aa23.2■■□□□ 1.3
CROCCP3-202ENST00000420820 PI4K2BQ8TCG2 481 aa23.2■■□□□ 1.3
CROCCP3-202ENST00000420820 PARP4Q9UKK3 1724 aaKnown RBP23.2■■□□□ 1.3
CROCCP3-202ENST00000420820 USP42Q9H9J4 1324 aaKnown RBP23.2■■□□□ 1.3
CROCCP3-202ENST00000420820 UNC5CLQ8IV45 518 aa23.2■■□□□ 1.3
CROCCP3-202ENST00000420820 LINS1Q8NG48 757 aa23.2■■□□□ 1.3
CROCCP3-202ENST00000420820 HDAC5Q9UQL6 1122 aa23.19■■□□□ 1.3
CROCCP3-202ENST00000420820 EPB41L2O43491 1005 aaKnown RBP23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 HSP90AA1P07900 732 aaKnown RBP23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 CYP27B1O15528 508 aa23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 SLC39A6Q13433 755 aa23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 CLEC17AQ6ZS10 378 aa23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 NFATC2IPQ8NCF5 419 aa23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 DCAF5Q96JK2 942 aa23.18■■□□□ 1.3
CROCCP3-202ENST00000420820 ZNF335Q9H4Z2 1342 aaPredicted RBP23.17■■□□□ 1.3
CROCCP3-202ENST00000420820 TRIM6-TRIM34B2RNG4 842 aa23.17■■□□□ 1.3
CROCCP3-202ENST00000420820 DDX58O95786 925 aaKnown RBP23.17■■□□□ 1.3
CROCCP3-202ENST00000420820 CHRNA2Q15822 529 aa23.17■■□□□ 1.3
CROCCP3-202ENST00000420820 ST18O60284 1047 aa23.16■■□□□ 1.3
CROCCP3-202ENST00000420820 TRAK2O60296 914 aa23.16■■□□□ 1.3
CROCCP3-202ENST00000420820 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
CROCCP3-202ENST00000420820 RILPL2Q969X0 211 aa23.16■■□□□ 1.3
CROCCP3-202ENST00000420820 C9orf78Q9NZ63 289 aaPredicted RBP23.16■■□□□ 1.3
CROCCP3-202ENST00000420820 GLI3P10071 1580 aa23.16■■□□□ 1.3
CROCCP3-202ENST00000420820 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
CROCCP3-202ENST00000420820 ANAPC15P60006 121 aa23.15■■□□□ 1.3
CROCCP3-202ENST00000420820 BRINP3Q76B58 766 aa23.15■■□□□ 1.3
CROCCP3-202ENST00000420820 LRP10Q7Z4F1 713 aa23.15■■□□□ 1.3
CROCCP3-202ENST00000420820 KAZALD1Q96I82 304 aa23.15■■□□□ 1.3
CROCCP3-202ENST00000420820 FOXD4L1Q9NU39 408 aa23.15■■□□□ 1.3
CROCCP3-202ENST00000420820 GRM8O00222 908 aa23.14■■□□□ 1.3
CROCCP3-202ENST00000420820 GBP4Q96PP9 640 aa23.14■■□□□ 1.3
CROCCP3-202ENST00000420820 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
CROCCP3-202ENST00000420820 TTC41PQ6P2S7 1318 aa23.13■■□□□ 1.29
CROCCP3-202ENST00000420820 IGKV5-2P06315 115 aa23.13■■□□□ 1.29
CROCCP3-202ENST00000420820 LAMB4A4D0S4 1761 aa23.12■■□□□ 1.29
CROCCP3-202ENST00000420820 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
CROCCP3-202ENST00000420820 LARP1Q6PKG0 1096 aaKnown RBP23.12■■□□□ 1.29
CROCCP3-202ENST00000420820 SUCLG2Q96I99 432 aa23.12■■□□□ 1.29
CROCCP3-202ENST00000420820 CWC22Q9HCG8 908 aaKnown RBP23.11■■□□□ 1.29
CROCCP3-202ENST00000420820 SOS2Q07890 1332 aaPredicted RBP23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 SNRPA1P09661 255 aaKnown RBP23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 MCCP23508 829 aa23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 ERC1Q8IUD2 1116 aa23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 IL25Q9H293 177 aa23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 SSFA2P28290 1259 aa23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 PALD1Q9ULE6 856 aa23.1■■□□□ 1.29
CROCCP3-202ENST00000420820 FSD2A1L4K1 749 aa23.09■■□□□ 1.29
CROCCP3-202ENST00000420820 PTMSP20962 102 aa23.09■■□□□ 1.29
CROCCP3-202ENST00000420820 AIMP1Q12904 312 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms