RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
PRAME-207ENST00000420709 NPC1L1Q9UHC9 1359 aa17.32■□□□□ 0.36
PRAME-207ENST00000420709 PIM2Q9P1W9 311 aa17.32■□□□□ 0.36
PRAME-207ENST00000420709 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
PRAME-207ENST00000420709 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
PRAME-207ENST00000420709 HSPA6P17066 643 aa17.3■□□□□ 0.36
PRAME-207ENST00000420709 NFIXQ14938 502 aa17.3■□□□□ 0.36
PRAME-207ENST00000420709 DALRD3Q5D0E6 543 aaKnown RBP17.3■□□□□ 0.36
PRAME-207ENST00000420709 TTC5Q8N0Z6 440 aa17.3■□□□□ 0.36
PRAME-207ENST00000420709 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
PRAME-207ENST00000420709 BCL2L12Q9HB09 334 aa17.3■□□□□ 0.36
PRAME-207ENST00000420709 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
PRAME-207ENST00000420709 TEFQ10587 303 aa17.29■□□□□ 0.36
PRAME-207ENST00000420709 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
PRAME-207ENST00000420709 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
PRAME-207ENST00000420709 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
PRAME-207ENST00000420709 SIPA1L3O60292 1781 aaPredicted RBP17.28■□□□□ 0.36
PRAME-207ENST00000420709 GNAT3A8MTJ3 354 aa17.28■□□□□ 0.36
PRAME-207ENST00000420709 ZNF496Q96IT1 587 aaPredicted RBP17.28■□□□□ 0.36
PRAME-207ENST00000420709 NMRK2Q9NPI5 230 aa17.28■□□□□ 0.36
PRAME-207ENST00000420709 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.36
PRAME-207ENST00000420709 BICDL1Q6ZP65 573 aa17.27■□□□□ 0.36
PRAME-207ENST00000420709 STARD3NLO95772 234 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 SERPINB2P05120 415 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 RNF181Q9P0P0 153 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
PRAME-207ENST00000420709 CARMIL3Q8ND23 1372 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
PRAME-207ENST00000420709 RASSF7Q02833 373 aa17.25■□□□□ 0.35
PRAME-207ENST00000420709 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
PRAME-207ENST00000420709 KCNQ3O43525 872 aa17.24■□□□□ 0.35
PRAME-207ENST00000420709 EIF5P55010 431 aaKnown RBP17.24■□□□□ 0.35
PRAME-207ENST00000420709 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
PRAME-207ENST00000420709 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
PRAME-207ENST00000420709 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
PRAME-207ENST00000420709 SBF1O95248 1867 aa17.22■□□□□ 0.35
PRAME-207ENST00000420709 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
PRAME-207ENST00000420709 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
PRAME-207ENST00000420709 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
PRAME-207ENST00000420709 CEMIPQ8WUJ3 1361 aa17.22■□□□□ 0.35
PRAME-207ENST00000420709 A0A087WZG4 1122 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 TOMM70O94826 608 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 A1BGP04217 495 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
PRAME-207ENST00000420709 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
PRAME-207ENST00000420709 PIP4K2AP48426 406 aaPredicted RBP17.2■□□□□ 0.34
PRAME-207ENST00000420709 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.342e-24■□□□□ 8.6
PRAME-207ENST00000420709 TEX13AQ9BXU3 409 aaPredicted RBP17.2■□□□□ 0.34
PRAME-207ENST00000420709 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
PRAME-207ENST00000420709 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
PRAME-207ENST00000420709 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
PRAME-207ENST00000420709 MCM10Q7L590 875 aa17.19■□□□□ 0.34
PRAME-207ENST00000420709 H0YIN7 160 aa17.18■□□□□ 0.34
PRAME-207ENST00000420709 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
PRAME-207ENST00000420709 PRELPP51888 382 aa17.18■□□□□ 0.34
PRAME-207ENST00000420709 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
PRAME-207ENST00000420709 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
PRAME-207ENST00000420709 TTLL6Q8N841 843 aa17.18■□□□□ 0.34
PRAME-207ENST00000420709 RRAGCQ9HB90 399 aa17.18■□□□□ 0.34
PRAME-207ENST00000420709 COL11A2P13942 1736 aaPredicted RBP17.18■□□□□ 0.34
PRAME-207ENST00000420709 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
PRAME-207ENST00000420709 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
PRAME-207ENST00000420709 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
PRAME-207ENST00000420709 BCORQ6W2J9 1755 aa17.17■□□□□ 0.34
PRAME-207ENST00000420709 KDM2BQ8NHM5 1336 aa17.17■□□□□ 0.34
PRAME-207ENST00000420709 CAMTA2O94983 1202 aa17.16■□□□□ 0.34
PRAME-207ENST00000420709 APLP1P51693 650 aa17.16■□□□□ 0.34
PRAME-207ENST00000420709 PRR5LQ6MZQ0 368 aa17.16■□□□□ 0.34
PRAME-207ENST00000420709 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
PRAME-207ENST00000420709 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
PRAME-207ENST00000420709 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
PRAME-207ENST00000420709 DZIP3Q86Y13 1208 aaKnown RBP17.15■□□□□ 0.34
PRAME-207ENST00000420709 RBM46Q8TBY0 533 aaKnown RBP17.15■□□□□ 0.34
PRAME-207ENST00000420709 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
PRAME-207ENST00000420709 TIAM2Q8IVF5 1701 aa17.15■□□□□ 0.34
PRAME-207ENST00000420709 NFKBIEO00221 500 aa17.14■□□□□ 0.33
PRAME-207ENST00000420709 NPHP1O15259 732 aa17.14■□□□□ 0.33
PRAME-207ENST00000420709 LMNB1P20700 586 aa17.14■□□□□ 0.33
PRAME-207ENST00000420709 HTRA3P83110 453 aa17.14■□□□□ 0.33
PRAME-207ENST00000420709 SETDB2Q96T68 719 aa17.14■□□□□ 0.33
PRAME-207ENST00000420709 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
PRAME-207ENST00000420709 PDE6BP35913 854 aa17.13■□□□□ 0.33
PRAME-207ENST00000420709 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
PRAME-207ENST00000420709 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
PRAME-207ENST00000420709 CACNA1SQ13698 1873 aa17.13■□□□□ 0.33
PRAME-207ENST00000420709 C21orf2O43822 256 aa17.12■□□□□ 0.33
PRAME-207ENST00000420709 SNRPA1P09661 255 aaKnown RBP17.11■□□□□ 0.33
PRAME-207ENST00000420709 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
PRAME-207ENST00000420709 ST5P78524 1137 aa17.1■□□□□ 0.33
PRAME-207ENST00000420709 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
PRAME-207ENST00000420709 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
PRAME-207ENST00000420709 GLTPD2A6NH11 291 aa17.09■□□□□ 0.33
PRAME-207ENST00000420709 NBPF26B4DH59 902 aa17.09■□□□□ 0.33
PRAME-207ENST00000420709 FSTL1Q12841 308 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms