RNA–Protein interactions for RNA: ENST00000420696.6

PBX1-203, Transcript of PBX homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-203ENST00000420696 CTR9Q6PD62 1173 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 IQCA1Q86XH1 822 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 CCDC117Q8IWD4 279 aaPredicted RBP13.54□□□□□ -0.24
PBX1-203ENST00000420696 ESPNB1AK53 854 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 GRPEL1Q9HAV7 217 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 ZNF652Q9Y2D9 606 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 HMOX1P09601 288 aa13.54□□□□□ -0.24
PBX1-203ENST00000420696 FKBP4Q02790 459 aaKnown RBP eCLIP13.54□□□□□ -0.24
PBX1-203ENST00000420696 CAVIN2O95810 425 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
PBX1-203ENST00000420696 CBX1P83916 185 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 TWISTNBQ3B726 338 aaPredicted RBP13.53□□□□□ -0.24
PBX1-203ENST00000420696 ZSCAN30Q86W11 494 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 SMC1BQ8NDV3 1235 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 STRN4Q9NRL3 753 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 IFIT1P09914 478 aaKnown RBP13.53□□□□□ -0.24
PBX1-203ENST00000420696 PSMC4P43686 418 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 CCDC40Q4G0X9 1142 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 MAATS1Q7Z4T9 603 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
PBX1-203ENST00000420696 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.53□□□□□ -0.24
PBX1-203ENST00000420696 CALML4Q96GE6 196 aa13.53□□□□□ -0.24
PBX1-203ENST00000420696 CAVIN4Q5BKX8 364 aa13.52□□□□□ -0.24
PBX1-203ENST00000420696 RAB3IPQ96QF0 476 aaPredicted RBP13.52□□□□□ -0.24
PBX1-203ENST00000420696 A0A087WZG4 1122 aa13.52□□□□□ -0.24
PBX1-203ENST00000420696 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.24
PBX1-203ENST00000420696 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.24
PBX1-203ENST00000420696 PRC1O43663 620 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 ZNF428Q96B54 188 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.25
PBX1-203ENST00000420696 CCDC160A6NGH7 325 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 ZFYP08048 801 aaPredicted RBP13.52□□□□□ -0.25
PBX1-203ENST00000420696 CNGA1P29973 690 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 MNAT1P51948 309 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 RASAL2Q9UJF2 1139 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 SH3BP5O60239 455 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 CASTP20810 708 aaKnown RBP13.52□□□□□ -0.25
PBX1-203ENST00000420696 CHMP4BP1P59074 171 aa13.52□□□□□ -0.25
PBX1-203ENST00000420696 FEZ2Q9UHY8 353 aaPredicted RBP13.51□□□□□ -0.25
PBX1-203ENST00000420696 USH1CQ9Y6N9 552 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 USP47Q96K76 1375 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 NCAPGQ9BPX3 1015 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 RBM25P49756 843 aaKnown RBP13.51□□□□□ -0.25
PBX1-203ENST00000420696 KANK3Q6NY19 840 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
PBX1-203ENST00000420696 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
PBX1-203ENST00000420696 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
PBX1-203ENST00000420696 ZBTB16Q05516 673 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 IL27Q8NEV9 243 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 B4DLN1 442 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 OPA1O60313 960 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 LDHCP07864 332 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 MRPL12P52815 198 aaKnown RBP13.5□□□□□ -0.25
PBX1-203ENST00000420696 PRPF4BQ13523 1007 aaKnown RBP13.5□□□□□ -0.25
PBX1-203ENST00000420696 SETSIPP0DME0 302 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 MSANTD4Q8NCY6 345 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
PBX1-203ENST00000420696 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
PBX1-203ENST00000420696 SH2B1Q9NRF2 756 aaPredicted RBP13.5□□□□□ -0.25
PBX1-203ENST00000420696 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 ANKS4BQ8N8V4 417 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 PPFIBP2Q8ND30 876 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 PANK1Q8TE04 598 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 SYNCQ9H7C4 482 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 HSF2BPO75031 334 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 TACC1O75410 805 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 TTLL12Q14166 644 aaPredicted RBP13.49□□□□□ -0.25
PBX1-203ENST00000420696 CFAP58Q5T655 872 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 AACSQ86V21 672 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 SERPINA10Q9UK55 444 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 RPAP2Q8IXW5 612 aaPredicted RBP13.49□□□□□ -0.25
PBX1-203ENST00000420696 ARFGAP2Q8N6H7 521 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 TBC1D5Q92609 795 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 TXNDC16Q9P2K2 825 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 TUBB4BP68371 445 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 PAXIP1Q6ZW49 1069 aaPredicted RBP13.49□□□□□ -0.25
PBX1-203ENST00000420696 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
PBX1-203ENST00000420696 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 IVLP07476 585 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 ATP2A2P16615 1042 aaKnown RBP13.49□□□□□ -0.25
PBX1-203ENST00000420696 KLHL10Q6JEL2 608 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 OTUD6BQ8N6M0 293 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
PBX1-203ENST00000420696 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 APBB1IPQ7Z5R6 666 aaPredicted RBP13.48□□□□□ -0.25
PBX1-203ENST00000420696 SYCP3Q8IZU3 236 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 SELENOOQ9BVL4 669 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 STARD3NLO95772 234 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 IMPG2Q9BZV3 1241 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 ABCF2Q9UG63 623 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 CLGNO14967 610 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 KIF5BP33176 963 aa13.48□□□□□ -0.25
PBX1-203ENST00000420696 CCDC89Q8N998 374 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms