RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 POLRMTO00411 1230 aaKnown RBP21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 DPEP1P16444 411 aa21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 CANXP27824 592 aaKnown RBP21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 EIF5P55010 431 aaKnown RBP21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 FMNL2Q96PY5 1086 aa21.58■■□□□ 1.05
SLC13A3-206ENST00000420568 COL15A1P39059 1388 aa21.58■■□□□ 1.04
SLC13A3-206ENST00000420568 KCNQ3O43525 872 aa21.57■■□□□ 1.04
SLC13A3-206ENST00000420568 MCM10Q7L590 875 aa21.57■■□□□ 1.04
SLC13A3-206ENST00000420568 KCNA3P22001 575 aa21.56■■□□□ 1.04
SLC13A3-206ENST00000420568 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
SLC13A3-206ENST00000420568 C4AP0C0L4 1744 aa21.55■■□□□ 1.04
SLC13A3-206ENST00000420568 A0A087WZG4 1122 aa21.54■■□□□ 1.04
SLC13A3-206ENST00000420568 DCTN1Q14203 1278 aa21.54■■□□□ 1.04
SLC13A3-206ENST00000420568 NFIXQ14938 502 aa21.54■■□□□ 1.04
SLC13A3-206ENST00000420568 PLEKHF1Q96S99 279 aa21.54■■□□□ 1.04
SLC13A3-206ENST00000420568 BCS1LQ9Y276 419 aa21.54■■□□□ 1.04
SLC13A3-206ENST00000420568 RALBP1Q15311 655 aa21.53■■□□□ 1.04
SLC13A3-206ENST00000420568 UBR2Q8IWV8 1755 aa21.52■■□□□ 1.04
SLC13A3-206ENST00000420568 IL6STP40189 918 aaPredicted RBP21.52■■□□□ 1.04
SLC13A3-206ENST00000420568 KIF13BQ9NQT8 1826 aa21.51■■□□□ 1.03
SLC13A3-206ENST00000420568 A1BGP04217 495 aa21.51■■□□□ 1.03
SLC13A3-206ENST00000420568 NEFMP07197 916 aa21.51■■□□□ 1.03
SLC13A3-206ENST00000420568 PIM2Q9P1W9 311 aa21.51■■□□□ 1.03
SLC13A3-206ENST00000420568 USP16Q9Y5T5 823 aa21.51■■□□□ 1.03
SLC13A3-206ENST00000420568 DDX10Q13206 875 aaKnown RBP21.5■■□□□ 1.03
SLC13A3-206ENST00000420568 TAF7Q15545 349 aaPredicted RBP21.5■■□□□ 1.03
SLC13A3-206ENST00000420568 ADCY9O60503 1353 aa21.49■■□□□ 1.03
SLC13A3-206ENST00000420568 SERPINB2P05120 415 aa21.49■■□□□ 1.03
SLC13A3-206ENST00000420568 SNRPA1P09661 255 aaKnown RBP21.49■■□□□ 1.03
SLC13A3-206ENST00000420568 C1QTNF8P60827 252 aa21.49■■□□□ 1.03
SLC13A3-206ENST00000420568 PNNQ9H307 717 aaKnown RBP21.49■■□□□ 1.03
SLC13A3-206ENST00000420568 VIRMAQ69YN4 1812 aaKnown RBP21.49■■□□□ 1.03
SLC13A3-206ENST00000420568 SIPA1L3O60292 1781 aaPredicted RBP21.48■■□□□ 1.03
SLC13A3-206ENST00000420568 ATP10DQ9P241 1426 aa21.48■■□□□ 1.03
SLC13A3-206ENST00000420568 GIGYF1O75420 1035 aaPredicted RBP21.48■■□□□ 1.03
SLC13A3-206ENST00000420568 TBC1D2BQ9UPU7 963 aa21.48■■□□□ 1.03
SLC13A3-206ENST00000420568 KIAA1551Q9HCM1 1747 aa21.48■■□□□ 1.03
SLC13A3-206ENST00000420568 PRAMEF22A3QJZ6 481 aa21.47■■□□□ 1.03
SLC13A3-206ENST00000420568 CHRNA5P30532 468 aa21.47■■□□□ 1.03
SLC13A3-206ENST00000420568 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
SLC13A3-206ENST00000420568 DALRD3Q5D0E6 543 aaKnown RBP21.47■■□□□ 1.03
SLC13A3-206ENST00000420568 ARHGAP27Q6ZUM4 889 aa21.47■■□□□ 1.03
SLC13A3-206ENST00000420568 TBC1D9BQ66K14 1250 aa21.46■■□□□ 1.03
SLC13A3-206ENST00000420568 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
SLC13A3-206ENST00000420568 BICDL1Q6ZP65 573 aa21.45■■□□□ 1.02
SLC13A3-206ENST00000420568 NPM2Q86SE8 214 aaKnown RBP21.45■■□□□ 1.02
SLC13A3-206ENST00000420568 MIS18AQ9NYP9 233 aa21.45■■□□□ 1.02
SLC13A3-206ENST00000420568 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
SLC13A3-206ENST00000420568 PNISRQ8TF01 805 aaKnown RBP21.44■■□□□ 1.02
SLC13A3-206ENST00000420568 GPBP1L1Q9HC44 474 aaPredicted RBP21.43■■□□□ 1.02
SLC13A3-206ENST00000420568 N4BP2Q86UW6 1770 aaPredicted RBP21.43■■□□□ 1.02
SLC13A3-206ENST00000420568 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
SLC13A3-206ENST00000420568 MAPK8IP3Q9UPT6 1336 aa21.42■■□□□ 1.02
SLC13A3-206ENST00000420568 PIP4K2AP48426 406 aaPredicted RBP21.41■■□□□ 1.02
SLC13A3-206ENST00000420568 MYBBP1AQ9BQG0 1328 aaKnown RBP21.4■■□□□ 1.02
SLC13A3-206ENST00000420568 NBPF26B4DH59 902 aa21.4■■□□□ 1.02
SLC13A3-206ENST00000420568 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
SLC13A3-206ENST00000420568 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
SLC13A3-206ENST00000420568 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
SLC13A3-206ENST00000420568 CLEC4GQ6UXB4 293 aa21.39■■□□□ 1.01
SLC13A3-206ENST00000420568 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
SLC13A3-206ENST00000420568 SETDB2Q96T68 719 aa21.39■■□□□ 1.01
SLC13A3-206ENST00000420568 BRIP1Q9BX63 1249 aa21.39■■□□□ 1.01
SLC13A3-206ENST00000420568 H0YIN7 160 aa21.38■■□□□ 1.01
SLC13A3-206ENST00000420568 EIF4A1P60842 406 aaKnown RBP21.38■■□□□ 1.01
SLC13A3-206ENST00000420568 PRR5LQ6MZQ0 368 aa21.38■■□□□ 1.01
SLC13A3-206ENST00000420568 C2CD5Q86YS7 1000 aa21.38■■□□□ 1.01
SLC13A3-206ENST00000420568 CARMIL3Q8ND23 1372 aa21.37■■□□□ 1.01
SLC13A3-206ENST00000420568 RIPK4P57078 832 aa21.37■■□□□ 1.01
SLC13A3-206ENST00000420568 PDZRN3Q9UPQ7 1066 aa21.37■■□□□ 1.01
SLC13A3-206ENST00000420568 NRXN2Q9P2S2 1712 aa21.37■■□□□ 1.01
SLC13A3-206ENST00000420568 RGL2O15211 777 aa21.36■■□□□ 1.01
SLC13A3-206ENST00000420568 PDE6BP35913 854 aa21.36■■□□□ 1.01
SLC13A3-206ENST00000420568 C9orf131Q5VYM1 1079 aa21.36■■□□□ 1.01
SLC13A3-206ENST00000420568 TTLL6Q8N841 843 aa21.36■■□□□ 1.01
SLC13A3-206ENST00000420568 TMPOP42166 694 aaKnown RBP21.35■■□□□ 1.01
SLC13A3-206ENST00000420568 CCDC24Q8N4L8 307 aa21.34■■□□□ 1.01
SLC13A3-206ENST00000420568 ZNF652Q9Y2D9 606 aa21.34■■□□□ 1.01
SLC13A3-206ENST00000420568 BRCA1P38398 1863 aaKnown RBP21.34■■□□□ 1.01
SLC13A3-206ENST00000420568 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
SLC13A3-206ENST00000420568 CNBD1Q8NA66 436 aa21.33■■□□□ 1.01
SLC13A3-206ENST00000420568 KIF3CO14782 793 aa21.32■■□□□ 1
SLC13A3-206ENST00000420568 PRKRIP1Q9H875 184 aaPredicted RBP21.32■■□□□ 1
SLC13A3-206ENST00000420568 BABAM1Q9NWV8 329 aa21.32■■□□□ 1
SLC13A3-206ENST00000420568 AFDNP55196 1824 aaKnown RBP21.32■■□□□ 1
SLC13A3-206ENST00000420568 SCN7AQ01118 1682 aa21.31■■□□□ 1
SLC13A3-206ENST00000420568 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
SLC13A3-206ENST00000420568 ST5P78524 1137 aa21.3■■□□□ 1
SLC13A3-206ENST00000420568 HLFQ16534 295 aa21.3■■□□□ 1
SLC13A3-206ENST00000420568 ZNF622Q969S3 477 aaKnown RBP eCLIP21.3■■□□□ 1
SLC13A3-206ENST00000420568 RNF181Q9P0P0 153 aa21.3■■□□□ 1
SLC13A3-206ENST00000420568 TSPYL4Q9UJ04 414 aa21.3■■□□□ 1
SLC13A3-206ENST00000420568 NPHP1O15259 732 aa21.29■■□□□ 1
SLC13A3-206ENST00000420568 NBPF5PQ86XG9 351 aaPredicted RBP21.29■■□□□ 1
SLC13A3-206ENST00000420568 CCDC146Q8IYE0 955 aa21.29■■□□□ 1
SLC13A3-206ENST00000420568 RUNDC1Q96C34 613 aa21.29■■□□□ 1
SLC13A3-206ENST00000420568 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
SLC13A3-206ENST00000420568 NIP7Q9Y221 180 aaKnown RBP eCLIP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms