RNA–Protein interactions for RNA: ENST00000419004.2

SNX5-203, Transcript of sorting nexin 5, humanhuman

TSL 5

Gene SNX5, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-203ENST00000419004 MEGF6O75095 1541 aa20.78■□□□□ 0.92
SNX5-203ENST00000419004 ATP6V1AP38606 617 aa20.78■□□□□ 0.92
SNX5-203ENST00000419004 MAP1SQ66K74 1059 aaPredicted RBP20.78■□□□□ 0.92
SNX5-203ENST00000419004 ITGB4P16144 1822 aa20.77■□□□□ 0.92
SNX5-203ENST00000419004 TTLL6Q8N841 843 aa20.77■□□□□ 0.92
SNX5-203ENST00000419004 DDX21Q9NR30 783 aaKnown RBP eCLIP20.77■□□□□ 0.92
SNX5-203ENST00000419004 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.91
SNX5-203ENST00000419004 A0A0C4DFX4 3053 aa20.76■□□□□ 0.91
SNX5-203ENST00000419004 BRPF1P55201 1214 aaPredicted RBP20.76■□□□□ 0.91
SNX5-203ENST00000419004 L3MBTL3Q96JM7 780 aaPredicted RBP20.76■□□□□ 0.91
SNX5-203ENST00000419004 PIGBQ92521 554 aa20.75■□□□□ 0.91
SNX5-203ENST00000419004 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
SNX5-203ENST00000419004 DDR1Q08345 913 aa20.73■□□□□ 0.91
SNX5-203ENST00000419004 IP6K1Q92551 441 aa20.73■□□□□ 0.91
SNX5-203ENST00000419004 GGNBP2Q9H3C7 697 aa20.73■□□□□ 0.91
SNX5-203ENST00000419004 FBLN1P23142 703 aa20.72■□□□□ 0.91
SNX5-203ENST00000419004 PNMA8AQ86V59 439 aaPredicted RBP20.72■□□□□ 0.91
SNX5-203ENST00000419004 COG3Q96JB2 828 aa20.72■□□□□ 0.91
SNX5-203ENST00000419004 ADAMTSL1Q8N6G6 1762 aa20.72■□□□□ 0.91
SNX5-203ENST00000419004 HACL1Q9UJ83 578 aa20.71■□□□□ 0.91
SNX5-203ENST00000419004 PCDH11XQ9BZA7 1347 aa20.71■□□□□ 0.91
SNX5-203ENST00000419004 PCDH11YQ9BZA8 1340 aa20.71■□□□□ 0.91
SNX5-203ENST00000419004 USP31Q70CQ4 1352 aa20.71■□□□□ 0.91
SNX5-203ENST00000419004 EPHX2P34913 555 aa20.7■□□□□ 0.9
SNX5-203ENST00000419004 TLL2Q9Y6L7 1015 aa20.69■□□□□ 0.9
SNX5-203ENST00000419004 CIAPIN1Q6FI81 312 aa20.68■□□□□ 0.9
SNX5-203ENST00000419004 RAPGEF4Q8WZA2 1011 aa20.68■□□□□ 0.9
SNX5-203ENST00000419004 CARD14Q9BXL6 1004 aa20.68■□□□□ 0.9
SNX5-203ENST00000419004 FKBP8Q14318 412 aa20.67■□□□□ 0.9
SNX5-203ENST00000419004 SZT2Q5T011 3432 aa20.67■□□□□ 0.9
SNX5-203ENST00000419004 RGPD2P0DJD1 1756 aa20.67■□□□□ 0.9
SNX5-203ENST00000419004 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
SNX5-203ENST00000419004 FYB1O15117 783 aa20.66■□□□□ 0.9
SNX5-203ENST00000419004 SMG6Q86US8 1419 aaKnown RBP20.65■□□□□ 0.9
SNX5-203ENST00000419004 POLRMTO00411 1230 aaKnown RBP20.65■□□□□ 0.9
SNX5-203ENST00000419004 RPS6KA4O75676 772 aa20.65■□□□□ 0.9
SNX5-203ENST00000419004 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
SNX5-203ENST00000419004 RC3H1Q5TC82 1133 aaKnown RBP20.65■□□□□ 0.9
SNX5-203ENST00000419004 HPS5Q9UPZ3 1129 aa20.65■□□□□ 0.9
SNX5-203ENST00000419004 FER1L6Q2WGJ9 1857 aa20.64■□□□□ 0.9
SNX5-203ENST00000419004 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
SNX5-203ENST00000419004 TAOK3Q9H2K8 898 aa20.64■□□□□ 0.89
SNX5-203ENST00000419004 TRPM7Q96QT4 1865 aa20.64■□□□□ 0.89
SNX5-203ENST00000419004 AMPHP49418 695 aa20.63■□□□□ 0.89
SNX5-203ENST00000419004 RRS1Q15050 365 aaKnown RBP20.63■□□□□ 0.89
SNX5-203ENST00000419004 CTU1Q7Z7A3 348 aaKnown RBP20.63■□□□□ 0.89
SNX5-203ENST00000419004 PANK3Q9H999 370 aa20.63■□□□□ 0.89
SNX5-203ENST00000419004 ASAP1Q9ULH1 1129 aa20.63■□□□□ 0.89
SNX5-203ENST00000419004 LTBP3Q9NS15 1303 aa20.62■□□□□ 0.89
SNX5-203ENST00000419004 FMR1Q06787 632 aaKnown RBP eCLIP20.62■□□□□ 0.896e-21■■■■■ 32.8
SNX5-203ENST00000419004 CST9Q5W186 159 aa20.62■□□□□ 0.89
SNX5-203ENST00000419004 TRIOBPQ9H2D6 2365 aa20.61■□□□□ 0.89
SNX5-203ENST00000419004 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
SNX5-203ENST00000419004 SRP68Q9UHB9 627 aaKnown RBP20.61■□□□□ 0.89
SNX5-203ENST00000419004 H0YIN7 160 aa20.6■□□□□ 0.89
SNX5-203ENST00000419004 CYP27B1O15528 508 aa20.6■□□□□ 0.89
SNX5-203ENST00000419004 C21orf2O43822 256 aa20.6■□□□□ 0.89
SNX5-203ENST00000419004 COLQQ9Y215 455 aaPredicted RBP20.6■□□□□ 0.89
SNX5-203ENST00000419004 MAP3K19Q56UN5 1328 aa20.59■□□□□ 0.89
SNX5-203ENST00000419004 TM4SF1P30408 202 aa20.59■□□□□ 0.89
SNX5-203ENST00000419004 TNNT2P45379 298 aaPredicted RBP20.59■□□□□ 0.89
SNX5-203ENST00000419004 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
SNX5-203ENST00000419004 CNTNAP4Q9C0A0 1308 aa20.58■□□□□ 0.89
SNX5-203ENST00000419004 SAPCD2Q86UD0 394 aa20.58■□□□□ 0.89
SNX5-203ENST00000419004 USP42Q9H9J4 1324 aaKnown RBP20.57■□□□□ 0.88
SNX5-203ENST00000419004 PPM1GO15355 546 aaPredicted RBP20.57■□□□□ 0.88
SNX5-203ENST00000419004 HHIPL1Q96JK4 782 aa20.57■□□□□ 0.88
SNX5-203ENST00000419004 KIF20BQ96Q89 1820 aa20.57■□□□□ 0.88
SNX5-203ENST00000419004 KIF7Q2M1P5 1343 aa20.56■□□□□ 0.88
SNX5-203ENST00000419004 CNGB1Q14028 1251 aaPredicted RBP20.56■□□□□ 0.88
SNX5-203ENST00000419004 NBPF6Q5VWK0 638 aa20.56■□□□□ 0.88
SNX5-203ENST00000419004 USHBP1Q8N6Y0 703 aa20.56■□□□□ 0.88
SNX5-203ENST00000419004 NBPF4Q96M43 638 aa20.56■□□□□ 0.88
SNX5-203ENST00000419004 SAGE1Q9NXZ1 904 aa20.56■□□□□ 0.88
SNX5-203ENST00000419004 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
SNX5-203ENST00000419004 HOXC9P31274 260 aa20.55■□□□□ 0.88
SNX5-203ENST00000419004 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
SNX5-203ENST00000419004 NOGQ13253 232 aa20.54■□□□□ 0.88
SNX5-203ENST00000419004 ATG3Q9NT62 314 aa20.54■□□□□ 0.88
SNX5-203ENST00000419004 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
SNX5-203ENST00000419004 TRAF5O00463 557 aa20.53■□□□□ 0.88
SNX5-203ENST00000419004 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
SNX5-203ENST00000419004 ZNF622Q969S3 477 aaKnown RBP eCLIP20.52■□□□□ 0.889e-10■■■■□ 20.2
SNX5-203ENST00000419004 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.87
SNX5-203ENST00000419004 ZNF541Q9H0D2 1346 aa20.52■□□□□ 0.87
SNX5-203ENST00000419004 KDRP35968 1356 aa20.51■□□□□ 0.87
SNX5-203ENST00000419004 NKX1-1Q15270 411 aaPredicted RBP20.51■□□□□ 0.87
SNX5-203ENST00000419004 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
SNX5-203ENST00000419004 EMILIN1Q9Y6C2 1016 aa20.51■□□□□ 0.87
SNX5-203ENST00000419004 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
SNX5-203ENST00000419004 INSRP06213 1382 aa20.5■□□□□ 0.87
SNX5-203ENST00000419004 HSP90AB2PQ58FF8 381 aa20.5■□□□□ 0.87
SNX5-203ENST00000419004 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
SNX5-203ENST00000419004 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
SNX5-203ENST00000419004 SLC4A9Q96Q91 983 aa20.49■□□□□ 0.87
SNX5-203ENST00000419004 ZIC5Q96T25 663 aa20.49■□□□□ 0.87
SNX5-203ENST00000419004 COL6A3P12111 3177 aa20.49■□□□□ 0.87
SNX5-203ENST00000419004 MKI67P46013 3256 aaKnown RBP20.48■□□□□ 0.87
SNX5-203ENST00000419004 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
SNX5-203ENST00000419004 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms