RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 LRRCC1Q9C099 1032 aa13.67□□□□□ -0.22
TRAPPC12-205ENST00000416918 MEGF6O75095 1541 aa13.67□□□□□ -0.22
TRAPPC12-205ENST00000416918 PKD1L3Q7Z443 1732 aa13.67□□□□□ -0.22
TRAPPC12-205ENST00000416918 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-205ENST00000416918 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-205ENST00000416918 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
TRAPPC12-205ENST00000416918 TEX13AQ9BXU3 409 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC12-205ENST00000416918 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
TRAPPC12-205ENST00000416918 KCNQ3O43525 872 aa13.65□□□□□ -0.22
TRAPPC12-205ENST00000416918 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
TRAPPC12-205ENST00000416918 C22orf23Q9BZE7 217 aa13.65□□□□□ -0.22
TRAPPC12-205ENST00000416918 PHAXQ9H814 394 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-205ENST00000416918 SIPA1L3O60292 1781 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-205ENST00000416918 SCN11AQ9UI33 1791 aa13.65□□□□□ -0.22
TRAPPC12-205ENST00000416918 UTYO14607 1347 aa13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 PARP4Q9UKK3 1724 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 RGPD5Q99666 1765 aa13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 POLA2Q14181 598 aa13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 ERC1Q8IUD2 1116 aa13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 C9orf78Q9NZ63 289 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-205ENST00000416918 EPB41L2O43491 1005 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-205ENST00000416918 STAP2Q9UGK3 403 aa13.63□□□□□ -0.23
TRAPPC12-205ENST00000416918 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-205ENST00000416918 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-205ENST00000416918 ADCY9O60503 1353 aa13.62□□□□□ -0.23
TRAPPC12-205ENST00000416918 VSIG10Q8N0Z9 540 aa13.62□□□□□ -0.23
TRAPPC12-205ENST00000416918 KIF1BPQ96EK5 621 aa13.62□□□□□ -0.23
TRAPPC12-205ENST00000416918 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC12-205ENST00000416918 MAP3K2Q9Y2U5 619 aa13.62□□□□□ -0.23
TRAPPC12-205ENST00000416918 COL15A1P39059 1388 aa13.61□□□□□ -0.23
TRAPPC12-205ENST00000416918 PDIA6Q15084 440 aa13.61□□□□□ -0.23
TRAPPC12-205ENST00000416918 RIC3Q7Z5B4 369 aa13.61□□□□□ -0.23
TRAPPC12-205ENST00000416918 THRAP3Q9Y2W1 955 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-205ENST00000416918 GRM8O00222 908 aa13.6□□□□□ -0.23
TRAPPC12-205ENST00000416918 REC8O95072 547 aa13.6□□□□□ -0.23
TRAPPC12-205ENST00000416918 SEC24BO95487 1268 aa13.6□□□□□ -0.23
TRAPPC12-205ENST00000416918 ANKRD13DQ6ZTN6 518 aa13.6□□□□□ -0.23
TRAPPC12-205ENST00000416918 METTL22Q9BUU2 404 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-205ENST00000416918 TOM1O60784 492 aa13.59□□□□□ -0.23
TRAPPC12-205ENST00000416918 PDE1AP54750 535 aa13.59□□□□□ -0.23
TRAPPC12-205ENST00000416918 MFAP1P55081 439 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-205ENST00000416918 TBC1D9Q6ZT07 1266 aa13.59□□□□□ -0.23
TRAPPC12-205ENST00000416918 PPP1R42Q7Z4L9 355 aa13.59□□□□□ -0.23
TRAPPC12-205ENST00000416918 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
TRAPPC12-205ENST00000416918 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.23
TRAPPC12-205ENST00000416918 COL22A1Q8NFW1 1626 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC12-205ENST00000416918 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
TRAPPC12-205ENST00000416918 SLC39A6Q13433 755 aa13.58□□□□□ -0.24
TRAPPC12-205ENST00000416918 SNX21Q969T3 373 aa13.58□□□□□ -0.24
TRAPPC12-205ENST00000416918 GPATCH3Q96I76 525 aa13.58□□□□□ -0.24
TRAPPC12-205ENST00000416918 ABCA3Q99758 1704 aa13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 MX1P20591 662 aa13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
TRAPPC12-205ENST00000416918 EXOC5O00471 708 aa13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 ERC2O15083 957 aa13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 NBPF7P0C2Y1 421 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 COPS6Q7L5N1 327 aa13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 XAGE3Q8WTP9 111 aa13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 TTC41PQ6P2S7 1318 aa13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 SALL3Q9BXA9 1300 aa13.56□□□□□ -0.24
TRAPPC12-205ENST00000416918 LTBP4Q8N2S1 1624 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 NEURL1BA8MQ27 555 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 STARD3NLO95772 234 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 GSPT1P15170 499 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 SDSP20132 328 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 GCKRQ14397 625 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 PROSER3Q2NL68 480 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 RTL5Q5HYW3 569 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 RHPN1Q8TCX5 695 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 USP42Q9H9J4 1324 aaKnown RBP13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
TRAPPC12-205ENST00000416918 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
TRAPPC12-205ENST00000416918 DDX54Q8TDD1 881 aaKnown RBP13.54□□□□□ -0.24
TRAPPC12-205ENST00000416918 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
TRAPPC12-205ENST00000416918 GLRX3O76003 335 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-205ENST00000416918 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
TRAPPC12-205ENST00000416918 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC12-205ENST00000416918 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-205ENST00000416918 RABEP1Q15276 862 aa13.53□□□□□ -0.24
TRAPPC12-205ENST00000416918 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC12-205ENST00000416918 ANXA1P04083 346 aa13.52□□□□□ -0.25
TRAPPC12-205ENST00000416918 IGKV5-2P06315 115 aa13.52□□□□□ -0.25
TRAPPC12-205ENST00000416918 MYL6BP14649 208 aa13.52□□□□□ -0.25
TRAPPC12-205ENST00000416918 MCCP23508 829 aa13.52□□□□□ -0.25
TRAPPC12-205ENST00000416918 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
TRAPPC12-205ENST00000416918 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.25
TRAPPC12-205ENST00000416918 ROBO1Q9Y6N7 1651 aa13.51□□□□□ -0.25
TRAPPC12-205ENST00000416918 LRP6O75581 1613 aa13.51□□□□□ -0.25
TRAPPC12-205ENST00000416918 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms