RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 VIRMAQ69YN4 1812 aaKnown RBP13.65□□□□□ -0.22
MDC1-202ENST00000416571 INTS5Q6P9B9 1019 aaKnown RBP13.65□□□□□ -0.22
MDC1-202ENST00000416571 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
MDC1-202ENST00000416571 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
MDC1-202ENST00000416571 SLC52A2Q9HAB3 445 aa13.65□□□□□ -0.22
MDC1-202ENST00000416571 ADAMTS7Q9UKP4 1686 aa13.65□□□□□ -0.22
MDC1-202ENST00000416571 AFDNP55196 1824 aaKnown RBP13.64□□□□□ -0.23
MDC1-202ENST00000416571 TM4SF1P30408 202 aa13.64□□□□□ -0.23
MDC1-202ENST00000416571 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
MDC1-202ENST00000416571 COL15A1P39059 1388 aa13.63□□□□□ -0.23
MDC1-202ENST00000416571 IL13P35225 146 aa13.63□□□□□ -0.23
MDC1-202ENST00000416571 HTRA3P83110 453 aa13.63□□□□□ -0.23
MDC1-202ENST00000416571 SMC1BQ8NDV3 1235 aa13.63□□□□□ -0.23
MDC1-202ENST00000416571 NARFQ9UHQ1 456 aa13.63□□□□□ -0.23
MDC1-202ENST00000416571 ZC3H4Q9UPT8 1303 aaKnown RBP13.63□□□□□ -0.23
MDC1-202ENST00000416571 RNMTO43148 476 aaKnown RBP13.62□□□□□ -0.23
MDC1-202ENST00000416571 RASSF7Q02833 373 aa13.62□□□□□ -0.23
MDC1-202ENST00000416571 SLC39A6Q13433 755 aa13.62□□□□□ -0.23
MDC1-202ENST00000416571 LGR6Q9HBX8 967 aa13.62□□□□□ -0.23
MDC1-202ENST00000416571 DLEC1Q9Y238 1755 aa13.62□□□□□ -0.23
MDC1-202ENST00000416571 MRC1P22897 1456 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 SERPINB2P05120 415 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 HMOX1P09601 288 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
MDC1-202ENST00000416571 LMNB1P20700 586 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 NFIXQ14938 502 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 ZBTB1Q9Y2K1 713 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 TIAM2Q8IVF5 1701 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
MDC1-202ENST00000416571 TTLL6Q8N841 843 aa13.6□□□□□ -0.23
MDC1-202ENST00000416571 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
MDC1-202ENST00000416571 H0YIN7 160 aa13.59□□□□□ -0.23
MDC1-202ENST00000416571 VEGFAP15692 232 aaPredicted RBP13.59□□□□□ -0.23
MDC1-202ENST00000416571 C2CD5Q86YS7 1000 aa13.59□□□□□ -0.23
MDC1-202ENST00000416571 TTC5Q8N0Z6 440 aa13.59□□□□□ -0.23
MDC1-202ENST00000416571 GLTPD2A6NH11 291 aa13.58□□□□□ -0.24
MDC1-202ENST00000416571 CANXP27824 592 aaKnown RBP13.58□□□□□ -0.24
MDC1-202ENST00000416571 FAM161AQ3B820 660 aa13.58□□□□□ -0.24
MDC1-202ENST00000416571 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
MDC1-202ENST00000416571 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.24
MDC1-202ENST00000416571 UBR2Q8IWV8 1755 aa13.58□□□□□ -0.24
MDC1-202ENST00000416571 A0A087WZG4 1122 aa13.57□□□□□ -0.24
MDC1-202ENST00000416571 STARD3NLO95772 234 aa13.57□□□□□ -0.24
MDC1-202ENST00000416571 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
MDC1-202ENST00000416571 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
MDC1-202ENST00000416571 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
MDC1-202ENST00000416571 NPM2Q86SE8 214 aaKnown RBP13.56□□□□□ -0.24
MDC1-202ENST00000416571 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
MDC1-202ENST00000416571 ZNF330Q9Y3S2 320 aaPredicted RBP13.56□□□□□ -0.24
MDC1-202ENST00000416571 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
MDC1-202ENST00000416571 NPHP1O15259 732 aa13.55□□□□□ -0.24
MDC1-202ENST00000416571 TEFQ10587 303 aa13.55□□□□□ -0.24
MDC1-202ENST00000416571 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
MDC1-202ENST00000416571 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.242e-11■□□□□ 11.1
MDC1-202ENST00000416571 PDZRN3Q9UPQ7 1066 aa13.55□□□□□ -0.24
MDC1-202ENST00000416571 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
MDC1-202ENST00000416571 PDE6BP35913 854 aa13.54□□□□□ -0.24
MDC1-202ENST00000416571 ANKRD31Q8N7Z5 1873 aa13.53□□□□□ -0.24
MDC1-202ENST00000416571 NFKBIEO00221 500 aa13.53□□□□□ -0.24
MDC1-202ENST00000416571 EIF5P55010 431 aaKnown RBP13.53□□□□□ -0.24
MDC1-202ENST00000416571 TEX13AQ9BXU3 409 aaPredicted RBP13.53□□□□□ -0.24
MDC1-202ENST00000416571 ZNF219Q9P2Y4 722 aaPredicted RBP13.53□□□□□ -0.24
MDC1-202ENST00000416571 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.24
MDC1-202ENST00000416571 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.25
MDC1-202ENST00000416571 C21orf2O43822 256 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 HSPA1AP0DMV8 641 aaKnown RBP13.52□□□□□ -0.25
MDC1-202ENST00000416571 HSPA1BP0DMV9 641 aaKnown RBP13.52□□□□□ -0.25
MDC1-202ENST00000416571 ERFEQ4G0M1 354 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 CC2D1BQ5T0F9 858 aaKnown RBP13.52□□□□□ -0.25
MDC1-202ENST00000416571 TBC1D9BQ66K14 1250 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
MDC1-202ENST00000416571 BRIP1Q9BX63 1249 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 HEG1Q9ULI3 1381 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 CACNA1SQ13698 1873 aa13.52□□□□□ -0.25
MDC1-202ENST00000416571 FER1L6Q2WGJ9 1857 aa13.51□□□□□ -0.25
MDC1-202ENST00000416571 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
MDC1-202ENST00000416571 GNAT3A8MTJ3 354 aa13.51□□□□□ -0.25
MDC1-202ENST00000416571 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
MDC1-202ENST00000416571 GAS2L2Q8NHY3 880 aa13.51□□□□□ -0.25
MDC1-202ENST00000416571 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
MDC1-202ENST00000416571 KIF7Q2M1P5 1343 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
MDC1-202ENST00000416571 ST5P78524 1137 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 PRR5LQ6MZQ0 368 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 CNBD1Q8NA66 436 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 TAOK3Q9H2K8 898 aa13.5□□□□□ -0.25
MDC1-202ENST00000416571 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
MDC1-202ENST00000416571 CNGB1Q14028 1251 aaPredicted RBP13.49□□□□□ -0.25
MDC1-202ENST00000416571 CNKSR1Q969H4 720 aa13.49□□□□□ -0.25
MDC1-202ENST00000416571 FMNL2Q96PY5 1086 aa13.49□□□□□ -0.25
MDC1-202ENST00000416571 SOGA3Q5TF21 947 aa13.48□□□□□ -0.25
MDC1-202ENST00000416571 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
MDC1-202ENST00000416571 ARFGEF2Q9Y6D5 1785 aa13.48□□□□□ -0.25
MDC1-202ENST00000416571 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
MDC1-202ENST00000416571 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
MDC1-202ENST00000416571 IL17REQ8NFR9 667 aa13.47□□□□□ -0.25
MDC1-202ENST00000416571 SLX4Q8IY92 1834 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms