RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 N4BP2Q86UW6 1770 aaPredicted RBP22.72■■□□□ 1.23
RTN4R-202ENST00000416372 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
RTN4R-202ENST00000416372 UNC5CLQ8IV45 518 aa22.71■■□□□ 1.23
RTN4R-202ENST00000416372 PDZRN3Q9UPQ7 1066 aa22.71■■□□□ 1.23
RTN4R-202ENST00000416372 UBR2Q8IWV8 1755 aa22.7■■□□□ 1.22
RTN4R-202ENST00000416372 USP16Q9Y5T5 823 aa22.7■■□□□ 1.22
RTN4R-202ENST00000416372 PI4KAP2A4QPH2 592 aa22.69■■□□□ 1.22
RTN4R-202ENST00000416372 SMC5Q8IY18 1101 aa22.69■■□□□ 1.22
RTN4R-202ENST00000416372 PI4KAP1Q8N8J0 262 aa22.69■■□□□ 1.22
RTN4R-202ENST00000416372 DNAAF4Q8WXU2 420 aa22.69■■□□□ 1.22
RTN4R-202ENST00000416372 PDIA6Q15084 440 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 DDB1Q16531 1140 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 GLI3P10071 1580 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 HSPA1LP34931 641 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 BARGINQ6ZT62 677 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 LAMB4A4D0S4 1761 aa22.68■■□□□ 1.22
RTN4R-202ENST00000416372 LRP6O75581 1613 aa22.67■■□□□ 1.22
RTN4R-202ENST00000416372 KCPQ6ZWJ8 1503 aa22.67■■□□□ 1.22
RTN4R-202ENST00000416372 SRCIN1Q9C0H9 1055 aa22.67■■□□□ 1.22
RTN4R-202ENST00000416372 ITGB4P16144 1822 aa22.67■■□□□ 1.22
RTN4R-202ENST00000416372 ADCY9O60503 1353 aa22.67■■□□□ 1.22
RTN4R-202ENST00000416372 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
RTN4R-202ENST00000416372 DDX58O95786 925 aaKnown RBP22.66■■□□□ 1.22
RTN4R-202ENST00000416372 GNAI3P08754 354 aa22.66■■□□□ 1.22
RTN4R-202ENST00000416372 MYL6BP14649 208 aa22.66■■□□□ 1.22
RTN4R-202ENST00000416372 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
RTN4R-202ENST00000416372 PIGBQ92521 554 aa22.66■■□□□ 1.22
RTN4R-202ENST00000416372 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
RTN4R-202ENST00000416372 KSR2Q6VAB6 950 aa22.66■■□□□ 1.22
RTN4R-202ENST00000416372 ANKRD44Q8N8A2 993 aa22.66■■□□□ 1.22
RTN4R-202ENST00000416372 ATP10DQ9P241 1426 aa22.65■■□□□ 1.22
RTN4R-202ENST00000416372 AIMP1Q12904 312 aaKnown RBP22.65■■□□□ 1.22
RTN4R-202ENST00000416372 VPS72Q15906 364 aa22.65■■□□□ 1.22
RTN4R-202ENST00000416372 MAP3K2Q9Y2U5 619 aa22.65■■□□□ 1.22
RTN4R-202ENST00000416372 GNAI2P04899 355 aa22.64■■□□□ 1.22
RTN4R-202ENST00000416372 FNBP4Q8N3X1 1017 aaPredicted RBP22.64■■□□□ 1.22
RTN4R-202ENST00000416372 GCC1Q96CN9 775 aa22.64■■□□□ 1.22
RTN4R-202ENST00000416372 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
RTN4R-202ENST00000416372 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
RTN4R-202ENST00000416372 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
RTN4R-202ENST00000416372 XAGE3Q8WTP9 111 aa22.62■■□□□ 1.21
RTN4R-202ENST00000416372 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
RTN4R-202ENST00000416372 BCL9O00512 1426 aa22.62■■□□□ 1.21
RTN4R-202ENST00000416372 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
RTN4R-202ENST00000416372 SYTL4Q96C24 671 aaPredicted RBP22.61■■□□□ 1.21
RTN4R-202ENST00000416372 USP44Q9H0E7 712 aa22.61■■□□□ 1.21
RTN4R-202ENST00000416372 USP21Q9UK80 565 aa22.61■■□□□ 1.21
RTN4R-202ENST00000416372 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
RTN4R-202ENST00000416372 PDE4AP27815 886 aa22.61■■□□□ 1.21
RTN4R-202ENST00000416372 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
RTN4R-202ENST00000416372 NUCB1Q02818 461 aa22.61■■□□□ 1.21
RTN4R-202ENST00000416372 COPS6Q7L5N1 327 aa22.61■■□□□ 1.21
RTN4R-202ENST00000416372 ATG3Q9NT62 314 aa22.61■■□□□ 1.21
RTN4R-202ENST00000416372 KAT6BQ8WYB5 2073 aa22.6■■□□□ 1.21
RTN4R-202ENST00000416372 DOT1LQ8TEK3 1739 aa22.6■■□□□ 1.21
RTN4R-202ENST00000416372 FAM98CQ17RN3 349 aaKnown RBP22.6■■□□□ 1.21
RTN4R-202ENST00000416372 RIC3Q7Z5B4 369 aa22.6■■□□□ 1.21
RTN4R-202ENST00000416372 PRIM1P49642 420 aaKnown RBP22.59■■□□□ 1.21
RTN4R-202ENST00000416372 MARCH10Q8NA82 808 aaPredicted RBP22.59■■□□□ 1.21
RTN4R-202ENST00000416372 HMMRO75330 724 aa22.58■■□□□ 1.21
RTN4R-202ENST00000416372 ALDH1L1O75891 902 aa22.58■■□□□ 1.21
RTN4R-202ENST00000416372 LRP10Q7Z4F1 713 aa22.58■■□□□ 1.21
RTN4R-202ENST00000416372 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.58■■□□□ 1.21
RTN4R-202ENST00000416372 ANKRD45Q5TZF3 282 aa22.58■■□□□ 1.2
RTN4R-202ENST00000416372 RBM42Q9BTD8 480 aaKnown RBP22.58■■□□□ 1.2
RTN4R-202ENST00000416372 DCTPP1Q9H773 170 aa22.58■■□□□ 1.2
RTN4R-202ENST00000416372 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
RTN4R-202ENST00000416372 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
RTN4R-202ENST00000416372 TEX13AQ9BXU3 409 aaPredicted RBP22.57■■□□□ 1.2
RTN4R-202ENST00000416372 BACH2Q9BYV9 841 aa22.57■■□□□ 1.2
RTN4R-202ENST00000416372 LRRFIP2Q9Y608 721 aaKnown RBP22.57■■□□□ 1.2
RTN4R-202ENST00000416372 NBPF26B4DH59 902 aa22.56■■□□□ 1.2
RTN4R-202ENST00000416372 NBPF14Q5TI25 921 aa22.56■■□□□ 1.2
RTN4R-202ENST00000416372 NBPF10Q6P3W6 841 aaKnown RBP22.56■■□□□ 1.2
RTN4R-202ENST00000416372 ANKRD13DQ6ZTN6 518 aa22.56■■□□□ 1.2
RTN4R-202ENST00000416372 NBPF15Q8N660 670 aa22.56■■□□□ 1.2
RTN4R-202ENST00000416372 LINS1Q8NG48 757 aa22.56■■□□□ 1.2
RTN4R-202ENST00000416372 A1BGP04217 495 aa22.55■■□□□ 1.2
RTN4R-202ENST00000416372 LNPKQ9C0E8 428 aa22.55■■□□□ 1.2
RTN4R-202ENST00000416372 A0A0G2JS52 829 aa22.55■■□□□ 1.2
RTN4R-202ENST00000416372 NEXNQ0ZGT2 675 aa22.55■■□□□ 1.2
RTN4R-202ENST00000416372 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
RTN4R-202ENST00000416372 ATP8B2P98198 1209 aa22.53■■□□□ 1.2
RTN4R-202ENST00000416372 CWF19L2Q2TBE0 894 aaKnown RBP22.53■■□□□ 1.2
RTN4R-202ENST00000416372 DNAJC10Q8IXB1 793 aa22.53■■□□□ 1.2
RTN4R-202ENST00000416372 ACSBG1Q96GR2 724 aa22.53■■□□□ 1.2
RTN4R-202ENST00000416372 METTL22Q9BUU2 404 aaPredicted RBP22.53■■□□□ 1.2
RTN4R-202ENST00000416372 C9orf78Q9NZ63 289 aaPredicted RBP22.53■■□□□ 1.2
RTN4R-202ENST00000416372 NBPF7P0C2Y1 421 aaPredicted RBP22.53■■□□□ 1.2
RTN4R-202ENST00000416372 ZBTB47Q9UFB7 747 aaPredicted RBP22.52■■□□□ 1.2
RTN4R-202ENST00000416372 AFF2P51816 1311 aa22.51■■□□□ 1.19
RTN4R-202ENST00000416372 STARD3NLO95772 234 aa22.51■■□□□ 1.19
RTN4R-202ENST00000416372 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
RTN4R-202ENST00000416372 MYD88Q99836 296 aa22.51■■□□□ 1.19
RTN4R-202ENST00000416372 HDAC5Q9UQL6 1122 aa22.5■■□□□ 1.19
RTN4R-202ENST00000416372 ARFGEF2Q9Y6D5 1785 aa22.5■■□□□ 1.19
RTN4R-202ENST00000416372 IGKV5-2P06315 115 aa22.5■■□□□ 1.19
RTN4R-202ENST00000416372 PNMA6EA0A0J9YXQ4 647 aa22.49■■□□□ 1.19
RTN4R-202ENST00000416372 NEURL1BA8MQ27 555 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms