RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 KAT6BQ8WYB5 2073 aa12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 GLI3P10071 1580 aa12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 DOT1LQ8TEK3 1739 aa12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 ITGB4P16144 1822 aa12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
DEPDC4-203ENST00000416321 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
DEPDC4-203ENST00000416321 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
DEPDC4-203ENST00000416321 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
DEPDC4-203ENST00000416321 DBF4Q9UBU7 674 aaPredicted RBP12.91□□□□□ -0.34
DEPDC4-203ENST00000416321 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
DEPDC4-203ENST00000416321 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
DEPDC4-203ENST00000416321 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
DEPDC4-203ENST00000416321 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
DEPDC4-203ENST00000416321 AAMPQ13685 434 aa12.9□□□□□ -0.34
DEPDC4-203ENST00000416321 PIGBQ92521 554 aa12.9□□□□□ -0.34
DEPDC4-203ENST00000416321 CHPF2Q9P2E5 772 aa12.9□□□□□ -0.34
DEPDC4-203ENST00000416321 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
DEPDC4-203ENST00000416321 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 BCL9O00512 1426 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 FLIIQ13045 1269 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 ACSBG1Q96GR2 724 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 TNNQ9UQP3 1299 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 C5P01031 1676 aa12.89□□□□□ -0.35
DEPDC4-203ENST00000416321 RLBP1P12271 317 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 B4GALNT3Q6L9W6 998 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 POTEHQ6S545 545 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 SEPT12Q8IYM1 358 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 TMEM57Q8N5G2 664 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 KCPQ6ZWJ8 1503 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 ABCC4O15439 1325 aa12.88□□□□□ -0.35
DEPDC4-203ENST00000416321 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 DDX58O95786 925 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 G2E3Q7L622 706 aa12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 DDX21Q9NR30 783 aaKnown RBP eCLIP12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 ATG3Q9NT62 314 aa12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 ASAP1Q9ULH1 1129 aa12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 ERBB4Q15303 1308 aa12.87□□□□□ -0.35
DEPDC4-203ENST00000416321 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
DEPDC4-203ENST00000416321 RBM6P78332 1123 aaKnown RBP12.86□□□□□ -0.35
DEPDC4-203ENST00000416321 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
DEPDC4-203ENST00000416321 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
DEPDC4-203ENST00000416321 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
DEPDC4-203ENST00000416321 STARD3NLO95772 234 aa12.85□□□□□ -0.35
DEPDC4-203ENST00000416321 CCT4P50991 539 aaKnown RBP12.85□□□□□ -0.35
DEPDC4-203ENST00000416321 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
DEPDC4-203ENST00000416321 ANXA1P04083 346 aa12.84□□□□□ -0.35
DEPDC4-203ENST00000416321 MYL6BP14649 208 aa12.84□□□□□ -0.35
DEPDC4-203ENST00000416321 INTS3Q68E01 1043 aaKnown RBP12.84□□□□□ -0.35
DEPDC4-203ENST00000416321 PHAXQ9H814 394 aaKnown RBP12.84□□□□□ -0.35
DEPDC4-203ENST00000416321 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
DEPDC4-203ENST00000416321 RGS12O14924 1447 aa12.83□□□□□ -0.36
DEPDC4-203ENST00000416321 F6X3S4 739 aa12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 AIMP1Q12904 312 aaKnown RBP12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 PROSER3Q2NL68 480 aa12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 DNAAF4Q8WXU2 420 aa12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 NHSQ6T4R5 1651 aa12.82□□□□□ -0.36
DEPDC4-203ENST00000416321 PALLDQ8WX93 1383 aa12.81□□□□□ -0.36
DEPDC4-203ENST00000416321 KCNQ2O43526 872 aa12.81□□□□□ -0.36
DEPDC4-203ENST00000416321 RXRBP28702 533 aa12.81□□□□□ -0.36
DEPDC4-203ENST00000416321 KSR2Q6VAB6 950 aa12.81□□□□□ -0.36
DEPDC4-203ENST00000416321 RIC3Q7Z5B4 369 aa12.81□□□□□ -0.36
DEPDC4-203ENST00000416321 XAGE3Q8WTP9 111 aa12.81□□□□□ -0.36
DEPDC4-203ENST00000416321 PI4KAP2A4QPH2 592 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 ATP6V1AP38606 617 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 NEXNQ0ZGT2 675 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 PDIA6Q15084 440 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 COPS6Q7L5N1 327 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 PI4KAP1Q8N8J0 262 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 MAP3K2Q9Y2U5 619 aa12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
DEPDC4-203ENST00000416321 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 A1BGP04217 495 aa12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 SIK1P57059 783 aa12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 RWDD1Q9H446 243 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 N4BP2Q86UW6 1770 aaPredicted RBP12.79□□□□□ -0.36
DEPDC4-203ENST00000416321 GNAI3P08754 354 aa12.78□□□□□ -0.36
DEPDC4-203ENST00000416321 KIF6Q6ZMV9 814 aa12.78□□□□□ -0.36
DEPDC4-203ENST00000416321 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
DEPDC4-203ENST00000416321 BTAF1O14981 1849 aa12.78□□□□□ -0.36
DEPDC4-203ENST00000416321 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
DEPDC4-203ENST00000416321 ADCY9O60503 1353 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms