RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 PARP3Q9Y6F1 533 aa26.76■■□□□ 1.87
CTTN-205ENST00000415461 STARD3NLO95772 234 aa26.75■■□□□ 1.87
CTTN-205ENST00000415461 USPL1Q5W0Q7 1092 aa26.75■■□□□ 1.87
CTTN-205ENST00000415461 PXDNLA1KZ92 1463 aa26.74■■□□□ 1.87
CTTN-205ENST00000415461 GRIN3BO60391 1043 aa26.74■■□□□ 1.87
CTTN-205ENST00000415461 ZPR1O75312 459 aa26.74■■□□□ 1.87
CTTN-205ENST00000415461 NEFMP07197 916 aa26.74■■□□□ 1.87
CTTN-205ENST00000415461 DDR1Q08345 913 aa26.74■■□□□ 1.87
CTTN-205ENST00000415461 HTATSF1O43719 755 aaKnown RBP26.73■■□□□ 1.87
CTTN-205ENST00000415461 MYBBP1AQ9BQG0 1328 aaKnown RBP26.72■■□□□ 1.87
CTTN-205ENST00000415461 NARFQ9UHQ1 456 aa26.72■■□□□ 1.87
CTTN-205ENST00000415461 CHD4Q14839 1912 aa26.71■■□□□ 1.87
CTTN-205ENST00000415461 ZNF784Q8NCA9 323 aaPredicted RBP26.71■■□□□ 1.87
CTTN-205ENST00000415461 TEX13AQ9BXU3 409 aaPredicted RBP26.71■■□□□ 1.87
CTTN-205ENST00000415461 KIF13BQ9NQT8 1826 aa26.71■■□□□ 1.87
CTTN-205ENST00000415461 NFE2L2Q16236 605 aa26.7■■□□□ 1.86
CTTN-205ENST00000415461 KIAA1551Q9HCM1 1747 aa26.7■■□□□ 1.86
CTTN-205ENST00000415461 MAPK8IP3Q9UPT6 1336 aa26.69■■□□□ 1.86
CTTN-205ENST00000415461 EIF5P55010 431 aaKnown RBP26.69■■□□□ 1.86
CTTN-205ENST00000415461 BCL2L12Q9HB09 334 aa26.69■■□□□ 1.86
CTTN-205ENST00000415461 POLRMTO00411 1230 aaKnown RBP26.68■■□□□ 1.86
CTTN-205ENST00000415461 ZNF330Q9Y3S2 320 aaPredicted RBP26.68■■□□□ 1.86
CTTN-205ENST00000415461 A0A0G2JLW4 131 aa26.67■■□□□ 1.86
CTTN-205ENST00000415461 PRAMEF22A3QJZ6 481 aa26.67■■□□□ 1.86
CTTN-205ENST00000415461 TM4SF1P30408 202 aa26.67■■□□□ 1.86
CTTN-205ENST00000415461 TGFB2P61812 414 aa26.67■■□□□ 1.86
CTTN-205ENST00000415461 A1BGP04217 495 aa26.66■■□□□ 1.86
CTTN-205ENST00000415461 NFIXQ14938 502 aa26.66■■□□□ 1.86
CTTN-205ENST00000415461 THUMPD2Q9BTF0 503 aaKnown RBP26.66■■□□□ 1.86
CTTN-205ENST00000415461 PNNQ9H307 717 aaKnown RBP26.66■■□□□ 1.86
CTTN-205ENST00000415461 DPEP1P16444 411 aa26.65■■□□□ 1.86
CTTN-205ENST00000415461 TAF7Q15545 349 aaPredicted RBP26.65■■□□□ 1.86
CTTN-205ENST00000415461 MIS18AQ9NYP9 233 aa26.65■■□□□ 1.86
CTTN-205ENST00000415461 USP16Q9Y5T5 823 aa26.65■■□□□ 1.86
CTTN-205ENST00000415461 A0A087WZG4 1122 aa26.64■■□□□ 1.86
CTTN-205ENST00000415461 IL6STP40189 918 aaPredicted RBP26.64■■□□□ 1.86
CTTN-205ENST00000415461 N4BP2Q86UW6 1770 aaPredicted RBP26.63■■□□□ 1.85
CTTN-205ENST00000415461 DLG5Q8TDM6 1919 aa26.63■■□□□ 1.85
CTTN-205ENST00000415461 SNRPA1P09661 255 aaKnown RBP26.63■■□□□ 1.85
CTTN-205ENST00000415461 PIP4K2AP48426 406 aaPredicted RBP26.62■■□□□ 1.85
CTTN-205ENST00000415461 SCN7AQ01118 1682 aa26.62■■□□□ 1.85
CTTN-205ENST00000415461 ZEB1P37275 1124 aaPredicted RBP26.61■■□□□ 1.85
CTTN-205ENST00000415461 TBC1D2BQ9UPU7 963 aa26.61■■□□□ 1.85
CTTN-205ENST00000415461 PRKRIP1Q9H875 184 aaPredicted RBP26.6■■□□□ 1.85
CTTN-205ENST00000415461 BCS1LQ9Y276 419 aa26.6■■□□□ 1.85
CTTN-205ENST00000415461 BICDL1Q6ZP65 573 aa26.59■■□□□ 1.85
CTTN-205ENST00000415461 KCNA3P22001 575 aa26.58■■□□□ 1.85
CTTN-205ENST00000415461 CCDC146Q8IYE0 955 aa26.58■■□□□ 1.85
CTTN-205ENST00000415461 SERPINB2P05120 415 aa26.57■■□□□ 1.84
CTTN-205ENST00000415461 TBC1D9BQ66K14 1250 aa26.57■■□□□ 1.84
CTTN-205ENST00000415461 NPM2Q86SE8 214 aaKnown RBP26.57■■□□□ 1.84
CTTN-205ENST00000415461 PNISRQ8TF01 805 aaKnown RBP26.57■■□□□ 1.84
CTTN-205ENST00000415461 KDM3BQ7LBC6 1761 aa26.56■■□□□ 1.84
CTTN-205ENST00000415461 CAMTA2O94983 1202 aa26.56■■□□□ 1.84
CTTN-205ENST00000415461 CHRNA5P30532 468 aa26.56■■□□□ 1.84
CTTN-205ENST00000415461 RIPK4P57078 832 aa26.56■■□□□ 1.84
CTTN-205ENST00000415461 NRXN2Q9P2S2 1712 aa26.56■■□□□ 1.84
CTTN-205ENST00000415461 TMPOP42166 694 aaKnown RBP26.55■■□□□ 1.84
CTTN-205ENST00000415461 WDR43Q15061 677 aaKnown RBP eCLIP26.55■■□□□ 1.84
CTTN-205ENST00000415461 CARMIL3Q8ND23 1372 aa26.55■■□□□ 1.84
CTTN-205ENST00000415461 NBPF26B4DH59 902 aa26.54■■□□□ 1.84
CTTN-205ENST00000415461 NBPF10Q6P3W6 841 aaKnown RBP26.54■■□□□ 1.84
CTTN-205ENST00000415461 DZIP3Q86Y13 1208 aaKnown RBP26.54■■□□□ 1.84
CTTN-205ENST00000415461 NBPF15Q8N660 670 aa26.54■■□□□ 1.84
CTTN-205ENST00000415461 RRP7AQ9Y3A4 280 aaKnown RBP26.54■■□□□ 1.84
CTTN-205ENST00000415461 AFDNP55196 1824 aaKnown RBP26.53■■□□□ 1.84
CTTN-205ENST00000415461 BRCA1P38398 1863 aaKnown RBP26.53■■□□□ 1.84
CTTN-205ENST00000415461 EIF4A1P60842 406 aaKnown RBP26.53■■□□□ 1.84
CTTN-205ENST00000415461 PIM2Q9P1W9 311 aa26.53■■□□□ 1.84
CTTN-205ENST00000415461 ADCY9O60503 1353 aa26.53■■□□□ 1.84
CTTN-205ENST00000415461 LAMB4A4D0S4 1761 aa26.52■■□□□ 1.84
CTTN-205ENST00000415461 ATP10DQ9P241 1426 aa26.52■■□□□ 1.84
CTTN-205ENST00000415461 BCORQ6W2J9 1755 aa26.51■■□□□ 1.83
CTTN-205ENST00000415461 GIGYF1O75420 1035 aaPredicted RBP26.51■■□□□ 1.83
CTTN-205ENST00000415461 ADAMTS8Q9UP79 889 aa26.51■■□□□ 1.83
CTTN-205ENST00000415461 DALRD3Q5D0E6 543 aaKnown RBP26.5■■□□□ 1.83
CTTN-205ENST00000415461 TSPYL4Q9UJ04 414 aa26.5■■□□□ 1.83
CTTN-205ENST00000415461 LMOD3Q0VAK6 560 aa26.49■■□□□ 1.83
CTTN-205ENST00000415461 NEUROD2Q15784 382 aa26.49■■□□□ 1.83
CTTN-205ENST00000415461 RUNDC1Q96C34 613 aa26.49■■□□□ 1.83
CTTN-205ENST00000415461 ARHGAP27Q6ZUM4 889 aa26.48■■□□□ 1.83
CTTN-205ENST00000415461 PRR5LQ6MZQ0 368 aa26.46■■□□□ 1.83
CTTN-205ENST00000415461 CCDC24Q8N4L8 307 aa26.46■■□□□ 1.83
CTTN-205ENST00000415461 SETDB2Q96T68 719 aa26.46■■□□□ 1.83
CTTN-205ENST00000415461 C2CD5Q86YS7 1000 aa26.45■■□□□ 1.82
CTTN-205ENST00000415461 ZNF652Q9Y2D9 606 aa26.44■■□□□ 1.82
CTTN-205ENST00000415461 CLEC4GQ6UXB4 293 aa26.43■■□□□ 1.82
CTTN-205ENST00000415461 CNBD1Q8NA66 436 aa26.43■■□□□ 1.82
CTTN-205ENST00000415461 TRIM35Q9UPQ4 493 aa26.43■■□□□ 1.82
CTTN-205ENST00000415461 ARFGEF1Q9Y6D6 1849 aa26.43■■□□□ 1.82
CTTN-205ENST00000415461 NGEFQ8N5V2 710 aa26.42■■□□□ 1.82
CTTN-205ENST00000415461 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
CTTN-205ENST00000415461 BABAM1Q9NWV8 329 aa26.41■■□□□ 1.82
CTTN-205ENST00000415461 DLEC1Q9Y238 1755 aa26.41■■□□□ 1.82
CTTN-205ENST00000415461 ANKRD31Q8N7Z5 1873 aa26.4■■□□□ 1.82
CTTN-205ENST00000415461 H0YIN7 160 aa26.4■■□□□ 1.82
CTTN-205ENST00000415461 NPHP1O15259 732 aa26.4■■□□□ 1.82
CTTN-205ENST00000415461 MYL6BP14649 208 aa26.4■■□□□ 1.82
CTTN-205ENST00000415461 HLFQ16534 295 aa26.4■■□□□ 1.82
CTTN-205ENST00000415461 BRIP1Q9BX63 1249 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms