RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 GGT6Q6P531 493 aa7.4□□□□□ -1.22
PTPRK-210ENST00000415055 DZIP3Q86Y13 1208 aaKnown RBP7.4□□□□□ -1.22
PTPRK-210ENST00000415055 CNTNAP3BQ96NU0 1288 aa7.4□□□□□ -1.22
PTPRK-210ENST00000415055 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-210ENST00000415055 CNTNAP3Q9BZ76 1288 aa7.4□□□□□ -1.22
PTPRK-210ENST00000415055 HMX1Q9NP08 348 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-210ENST00000415055 POLMQ9NP87 494 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-210ENST00000415055 TMPRSS4Q9NRS4 437 aa7.4□□□□□ -1.22
PTPRK-210ENST00000415055 ZNF777Q9ULD5 760 aaPredicted RBP7.4□□□□□ -1.22
PTPRK-210ENST00000415055 CPS1P31327 1500 aa7.4□□□□□ -1.22
PTPRK-210ENST00000415055 PREX2Q70Z35 1606 aa7.39□□□□□ -1.23
PTPRK-210ENST00000415055 ABCC1P33527 1531 aa7.39□□□□□ -1.23
PTPRK-210ENST00000415055 TCOF1Q13428 1488 aaKnown RBP7.39□□□□□ -1.23
PTPRK-210ENST00000415055 TROQ12816 1431 aaPredicted RBP7.39□□□□□ -1.23
PTPRK-210ENST00000415055 PTPRKQ15262 1439 aa7.39□□□□□ -1.23
PTPRK-210ENST00000415055 RAB15P59190 212 aa7.39□□□□□ -1.23
PTPRK-210ENST00000415055 ZNF784Q8NCA9 323 aaPredicted RBP7.39□□□□□ -1.23
PTPRK-210ENST00000415055 COL25A1Q9BXS0 654 aaPredicted RBP7.39□□□□□ -1.23
PTPRK-210ENST00000415055 SHANK2Q9UPX8 1470 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 ITGA6P23229 1130 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 RFC5P40937 340 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 KCNMA1Q12791 1236 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 RNF217Q8TC41 542 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 ZNF395Q9H8N7 513 aaPredicted RBP7.38□□□□□ -1.23
PTPRK-210ENST00000415055 CDC42BPAQ5VT25 1732 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 LRRIQ1Q96JM4 1722 aa7.38□□□□□ -1.23
PTPRK-210ENST00000415055 DNMT1P26358 1616 aaKnown RBP7.38□□□□□ -1.23
PTPRK-210ENST00000415055 SPAG9O60271 1321 aaKnown RBP7.37□□□□□ -1.23
PTPRK-210ENST00000415055 ESPNB1AK53 854 aa7.37□□□□□ -1.23
PTPRK-210ENST00000415055 ERVH48-1M5A8F1 160 aa7.37□□□□□ -1.23
PTPRK-210ENST00000415055 ADH1AP07327 375 aa7.37□□□□□ -1.23
PTPRK-210ENST00000415055 SV2AQ7L0J3 742 aa7.37□□□□□ -1.23
PTPRK-210ENST00000415055 CFAP65Q6ZU64 1925 aaKnown RBP7.37□□□□□ -1.23
PTPRK-210ENST00000415055 FMN1Q68DA7 1419 aa7.36□□□□□ -1.23
PTPRK-210ENST00000415055 SETD1AO15047 1707 aaKnown RBP7.36□□□□□ -1.23
PTPRK-210ENST00000415055 LILRA1O75019 489 aa7.36□□□□□ -1.23
PTPRK-210ENST00000415055 UBTFP17480 764 aaKnown RBP7.36□□□□□ -1.23
PTPRK-210ENST00000415055 ADD1P35611 737 aaKnown RBP7.36□□□□□ -1.23
PTPRK-210ENST00000415055 VWA5B2Q8N398 1253 aa7.36□□□□□ -1.23
PTPRK-210ENST00000415055 TRIM52Q96A61 297 aa7.36□□□□□ -1.23
PTPRK-210ENST00000415055 SAMD9LQ8IVG5 1584 aa7.36□□□□□ -1.23
PTPRK-210ENST00000415055 A2ML1A8K2U0 1454 aa7.36□□□□□ -1.23
PTPRK-210ENST00000415055 CDC14CA4D256 554 aa7.35□□□□□ -1.23
PTPRK-210ENST00000415055 PTGIRP43119 386 aa7.35□□□□□ -1.23
PTPRK-210ENST00000415055 HNRNPMP52272 730 aaKnown RBP eCLIP7.35□□□□□ -1.23
PTPRK-210ENST00000415055 RNFT1Q5M7Z0 435 aa7.35□□□□□ -1.23
PTPRK-210ENST00000415055 ANKLE2Q86XL3 938 aa7.35□□□□□ -1.23
PTPRK-210ENST00000415055 SEPT12Q8IYM1 358 aa7.35□□□□□ -1.23
PTPRK-210ENST00000415055 NEURL4Q96JN8 1562 aa7.34□□□□□ -1.23
PTPRK-210ENST00000415055 ATP7AQ04656 1500 aa7.34□□□□□ -1.23
PTPRK-210ENST00000415055 SYCP2Q9BX26 1530 aa7.34□□□□□ -1.23
PTPRK-210ENST00000415055 TMEM259Q4ZIN3 620 aa7.34□□□□□ -1.23
PTPRK-210ENST00000415055 FOXD4L5Q5VV16 416 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-210ENST00000415055 KDF1Q8NAX2 398 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-210ENST00000415055 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.23
PTPRK-210ENST00000415055 RGS17Q9UGC6 210 aaPredicted RBP7.34□□□□□ -1.23
PTPRK-210ENST00000415055 ADAMTS8Q9UP79 889 aa7.34□□□□□ -1.23
PTPRK-210ENST00000415055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.33□□□□□ -1.245e-6■■□□□ 12.8
PTPRK-210ENST00000415055 STRCP1A6NGW2 1772 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 A2MP01023 1474 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 SENP3-EIF4A1A0A087X0R7 540 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 RNF225M0QZC1 329 aaPredicted RBP7.33□□□□□ -1.24
PTPRK-210ENST00000415055 SLURP2P0DP57 97 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 GSK3AP49840 483 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 ZNF385CQ66K41 422 aaPredicted RBP7.33□□□□□ -1.24
PTPRK-210ENST00000415055 POTEAQ6S8J7 498 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 SVOPQ8N4V2 548 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 RNF17Q9BXT8 1623 aaKnown RBP7.33□□□□□ -1.24
PTPRK-210ENST00000415055 ALKQ9UM73 1620 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 VWDEQ8N2E2 1590 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 TNRQ92752 1358 aa7.33□□□□□ -1.24
PTPRK-210ENST00000415055 IQGAP1P46940 1657 aa7.32□□□□□ -1.24
PTPRK-210ENST00000415055 ADGBQ8N7X0 1667 aa7.32□□□□□ -1.24
PTPRK-210ENST00000415055 LYSMD3Q7Z3D4 306 aa7.32□□□□□ -1.24
PTPRK-210ENST00000415055 THEMISQ8N1K5 641 aaPredicted RBP7.32□□□□□ -1.24
PTPRK-210ENST00000415055 CYLDQ9NQC7 956 aa7.32□□□□□ -1.24
PTPRK-210ENST00000415055 EEA1Q15075 1411 aa7.32□□□□□ -1.24
PTPRK-210ENST00000415055 ZBBXA8MT70 800 aa7.31□□□□□ -1.24
PTPRK-210ENST00000415055 APBB1O00213 710 aa7.31□□□□□ -1.24
PTPRK-210ENST00000415055 TRAK2O60296 914 aa7.31□□□□□ -1.24
PTPRK-210ENST00000415055 NPHP4O75161 1426 aaPredicted RBP7.31□□□□□ -1.24
PTPRK-210ENST00000415055 PODXL2Q9NZ53 605 aa7.31□□□□□ -1.24
PTPRK-210ENST00000415055 ARHGAP35Q9NRY4 1499 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 PLXNC1O60486 1568 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 RNF144AP50876 292 aaPredicted RBP7.3□□□□□ -1.24
PTPRK-210ENST00000415055 RASSF7Q02833 373 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 MCM6Q14566 821 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 CCDC125Q86Z20 511 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 KCTD17Q8N5Z5 321 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 PCDHB9Q9Y5E1 797 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 FAM135AQ9P2D6 1515 aa7.3□□□□□ -1.24
PTPRK-210ENST00000415055 SYNMO15061 1565 aa7.29□□□□□ -1.24
PTPRK-210ENST00000415055 UGGT1Q9NYU2 1555 aa7.29□□□□□ -1.24
PTPRK-210ENST00000415055 INO80Q9ULG1 1556 aaPredicted RBP7.29□□□□□ -1.24
PTPRK-210ENST00000415055 LRRC7Q96NW7 1537 aa7.29□□□□□ -1.24
PTPRK-210ENST00000415055 ATP5J2-PTCD1G3V325 749 aa7.29□□□□□ -1.24
PTPRK-210ENST00000415055 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
PTPRK-210ENST00000415055 WHAMMQ8TF30 809 aa7.29□□□□□ -1.24
PTPRK-210ENST00000415055 CFDP1Q9UEE9 299 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms