RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TGFB2P61812 414 aa20.82■□□□□ 0.92
ACTB-202ENST00000414620 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.923e-42■□□□□ 8.5
ACTB-202ENST00000414620 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
ACTB-202ENST00000414620 BCS1LQ9Y276 419 aa20.82■□□□□ 0.92
ACTB-202ENST00000414620 SCN7AQ01118 1682 aa20.81■□□□□ 0.92
ACTB-202ENST00000414620 ZPR1O75312 459 aa20.81■□□□□ 0.92
ACTB-202ENST00000414620 CANXP27824 592 aaKnown RBP20.81■□□□□ 0.92
ACTB-202ENST00000414620 C1QTNF8P60827 252 aa20.8■□□□□ 0.92
ACTB-202ENST00000414620 VSIG10Q8N0Z9 540 aa20.8■□□□□ 0.92
ACTB-202ENST00000414620 ZNF526Q8TF50 670 aaPredicted RBP20.8■□□□□ 0.92
ACTB-202ENST00000414620 ZNF496Q96IT1 587 aaPredicted RBP20.8■□□□□ 0.92
ACTB-202ENST00000414620 NRXN2Q9P2S2 1712 aa20.8■□□□□ 0.92
ACTB-202ENST00000414620 ADCY9O60503 1353 aa20.8■□□□□ 0.92
ACTB-202ENST00000414620 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
ACTB-202ENST00000414620 HEG1Q9ULI3 1381 aa20.79■□□□□ 0.92
ACTB-202ENST00000414620 CEMIPQ8WUJ3 1361 aa20.78■□□□□ 0.92
ACTB-202ENST00000414620 POLRMTO00411 1230 aaKnown RBP20.78■□□□□ 0.92
ACTB-202ENST00000414620 NARFQ9UHQ1 456 aa20.78■□□□□ 0.92
ACTB-202ENST00000414620 DLEC1Q9Y238 1755 aa20.77■□□□□ 0.92
ACTB-202ENST00000414620 KCNQ3O43525 872 aa20.77■□□□□ 0.92
ACTB-202ENST00000414620 FCHSD2O94868 740 aa20.77■□□□□ 0.92
ACTB-202ENST00000414620 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
ACTB-202ENST00000414620 TM4SF1P30408 202 aa20.76■□□□□ 0.91
ACTB-202ENST00000414620 ZNF330Q9Y3S2 320 aaPredicted RBP20.76■□□□□ 0.91
ACTB-202ENST00000414620 BCORQ6W2J9 1755 aa20.76■□□□□ 0.91
ACTB-202ENST00000414620 BTBD11A6QL63 1104 aa20.75■□□□□ 0.91
ACTB-202ENST00000414620 STARD3NLO95772 234 aa20.75■□□□□ 0.91
ACTB-202ENST00000414620 NFIXQ14938 502 aa20.75■□□□□ 0.91
ACTB-202ENST00000414620 MCM10Q7L590 875 aa20.75■□□□□ 0.91
ACTB-202ENST00000414620 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
ACTB-202ENST00000414620 KCNA3P22001 575 aa20.74■□□□□ 0.91
ACTB-202ENST00000414620 CHRNA5P30532 468 aa20.74■□□□□ 0.91
ACTB-202ENST00000414620 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
ACTB-202ENST00000414620 ANKRD31Q8N7Z5 1873 aa20.74■□□□□ 0.91
ACTB-202ENST00000414620 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
ACTB-202ENST00000414620 GPBP1L1Q9HC44 474 aaPredicted RBP20.74■□□□□ 0.91
ACTB-202ENST00000414620 ARHGAP27Q6ZUM4 889 aa20.73■□□□□ 0.91
ACTB-202ENST00000414620 RTF1Q92541 710 aaKnown RBP20.73■□□□□ 0.91
ACTB-202ENST00000414620 SBF1O95248 1867 aa20.73■□□□□ 0.91
ACTB-202ENST00000414620 CACNA1SQ13698 1873 aa20.73■□□□□ 0.91
ACTB-202ENST00000414620 EIF5P55010 431 aaKnown RBP20.72■□□□□ 0.91
ACTB-202ENST00000414620 BICDL1Q6ZP65 573 aa20.72■□□□□ 0.91
ACTB-202ENST00000414620 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
ACTB-202ENST00000414620 A1BGP04217 495 aa20.71■□□□□ 0.91
ACTB-202ENST00000414620 PIM2Q9P1W9 311 aa20.71■□□□□ 0.91
ACTB-202ENST00000414620 KDM3BQ7LBC6 1761 aa20.7■□□□□ 0.9
ACTB-202ENST00000414620 SERPINB2P05120 415 aa20.7■□□□□ 0.9
ACTB-202ENST00000414620 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
ACTB-202ENST00000414620 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
ACTB-202ENST00000414620 CCDC88AQ3V6T2 1871 aa20.7■□□□□ 0.9
ACTB-202ENST00000414620 CARMIL3Q8ND23 1372 aa20.7■□□□□ 0.9
ACTB-202ENST00000414620 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
ACTB-202ENST00000414620 A0A087WZG4 1122 aa20.69■□□□□ 0.9
ACTB-202ENST00000414620 PRAMEF22A3QJZ6 481 aa20.69■□□□□ 0.9
ACTB-202ENST00000414620 PIP4K2AP48426 406 aaPredicted RBP20.69■□□□□ 0.9
ACTB-202ENST00000414620 DALRD3Q5D0E6 543 aaKnown RBP20.69■□□□□ 0.9
ACTB-202ENST00000414620 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
ACTB-202ENST00000414620 IL6STP40189 918 aaPredicted RBP20.67■□□□□ 0.9
ACTB-202ENST00000414620 USP16Q9Y5T5 823 aa20.67■□□□□ 0.9
ACTB-202ENST00000414620 NEFMP07197 916 aa20.65■□□□□ 0.9
ACTB-202ENST00000414620 NPM2Q86SE8 214 aaKnown RBP20.65■□□□□ 0.9
ACTB-202ENST00000414620 CCDC24Q8N4L8 307 aa20.64■□□□□ 0.89
ACTB-202ENST00000414620 MIS18AQ9NYP9 233 aa20.64■□□□□ 0.89
ACTB-202ENST00000414620 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
ACTB-202ENST00000414620 C9orf131Q5VYM1 1079 aa20.63■□□□□ 0.89
ACTB-202ENST00000414620 C2CD5Q86YS7 1000 aa20.63■□□□□ 0.89
ACTB-202ENST00000414620 TIAM2Q8IVF5 1701 aa20.62■□□□□ 0.89
ACTB-202ENST00000414620 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
ACTB-202ENST00000414620 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
ACTB-202ENST00000414620 DZIP3Q86Y13 1208 aaKnown RBP20.62■□□□□ 0.89
ACTB-202ENST00000414620 PLEKHF1Q96S99 279 aa20.62■□□□□ 0.89
ACTB-202ENST00000414620 THUMPD2Q9BTF0 503 aaKnown RBP20.61■□□□□ 0.89
ACTB-202ENST00000414620 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
ACTB-202ENST00000414620 KIF3CO14782 793 aa20.6■□□□□ 0.89
ACTB-202ENST00000414620 RASSF7Q02833 373 aa20.6■□□□□ 0.89
ACTB-202ENST00000414620 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
ACTB-202ENST00000414620 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
ACTB-202ENST00000414620 RNF181Q9P0P0 153 aa20.6■□□□□ 0.89
ACTB-202ENST00000414620 ARFGEF2Q9Y6D5 1785 aa20.59■□□□□ 0.89
ACTB-202ENST00000414620 NFE2L2Q16236 605 aa20.59■□□□□ 0.89
ACTB-202ENST00000414620 PRR5LQ6MZQ0 368 aa20.59■□□□□ 0.89
ACTB-202ENST00000414620 NUP98P52948 1817 aa20.58■□□□□ 0.89
ACTB-202ENST00000414620 H0YIN7 160 aa20.58■□□□□ 0.89
ACTB-202ENST00000414620 NPHP1O15259 732 aa20.58■□□□□ 0.89
ACTB-202ENST00000414620 TNRC6CQ9HCJ0 1690 aaKnown RBP20.58■□□□□ 0.88
ACTB-202ENST00000414620 NBPF26B4DH59 902 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 FER1L6Q2WGJ9 1857 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 NBPF10Q6P3W6 841 aaKnown RBP20.57■□□□□ 0.88
ACTB-202ENST00000414620 NBPF15Q8N660 670 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 TTLL6Q8N841 843 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 ZNF622Q969S3 477 aaKnown RBP eCLIP20.57■□□□□ 0.88
ACTB-202ENST00000414620 SETDB2Q96T68 719 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 NMRK2Q9NPI5 230 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 SLX4Q8IY92 1834 aa20.57■□□□□ 0.88
ACTB-202ENST00000414620 RALBP1Q15311 655 aa20.56■□□□□ 0.88
ACTB-202ENST00000414620 CNBD1Q8NA66 436 aa20.56■□□□□ 0.88
ACTB-202ENST00000414620 DICER1Q9UPY3 1922 aaKnown RBP20.55■□□□□ 0.88
ACTB-202ENST00000414620 ZNF219Q9P2Y4 722 aaPredicted RBP20.55■□□□□ 0.88
ACTB-202ENST00000414620 BRIP1Q9BX63 1249 aa20.54■□□□□ 0.88
ACTB-202ENST00000414620 PNNQ9H307 717 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms