RNA–Protein interactions for RNA: ENST00000414510.5

PTPA-210, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-210	ENST00000414510	TAF7	Q15545	349 aa	Predicted RBP	32.14	■■■□□ 2.74
PTPA-210	ENST00000414510	SOS1	Q07889	1333 aa	Predicted RBP	32.13	■■■□□ 2.73
PTPA-210	ENST00000414510	SYT17	Q9BSW7	474 aa		32.13	■■■□□ 2.73
PTPA-210	ENST00000414510	NEUROD2	Q15784	382 aa		32.12	■■■□□ 2.73
PTPA-210	ENST00000414510	PRAMEF22	A3QJZ6	481 aa		32.11	■■■□□ 2.73
PTPA-210	ENST00000414510	RFC4	P35249	363 aa		32.11	■■■□□ 2.73
PTPA-210	ENST00000414510	SRP68	Q9UHB9	627 aa	Known RBP	32.11	■■■□□ 2.73
PTPA-210	ENST00000414510	COL15A1	P39059	1388 aa		32.09	■■■□□ 2.73
PTPA-210	ENST00000414510	CANX	P27824	592 aa	Known RBP	32.09	■■■□□ 2.73
PTPA-210	ENST00000414510	LAMB4	A4D0S4	1761 aa		32.09	■■■□□ 2.73
PTPA-210	ENST00000414510	STARD3NL	O95772	234 aa		32.07	■■■□□ 2.72
PTPA-210	ENST00000414510	GYS1	P13807	737 aa		32.07	■■■□□ 2.72
PTPA-210	ENST00000414510	USP42	Q9H9J4	1324 aa	Known RBP	32.06	■■■□□ 2.72
PTPA-210	ENST00000414510	LMOD3	Q0VAK6	560 aa		32.05	■■■□□ 2.72
PTPA-210	ENST00000414510	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.05	■■■□□ 2.72
PTPA-210	ENST00000414510	USP16	Q9Y5T5	823 aa		32.05	■■■□□ 2.72
PTPA-210	ENST00000414510	PNISR	Q8TF01	805 aa	Known RBP	32.04	■■■□□ 2.72
PTPA-210	ENST00000414510	MRS2	Q9HD23	443 aa		32.04	■■■□□ 2.72
PTPA-210	ENST00000414510	TRIM35	Q9UPQ4	493 aa		32.04	■■■□□ 2.72
PTPA-210	ENST00000414510	A1BG	P04217	495 aa		32.03	■■■□□ 2.72
PTPA-210	ENST00000414510	MMP10	P09238	476 aa		32.03	■■■□□ 2.72
PTPA-210	ENST00000414510	NLGN2	Q8NFZ4	835 aa		32.03	■■■□□ 2.72
PTPA-210	ENST00000414510	SNRPA1	P09661	255 aa	Known RBP	32.02	■■■□□ 2.72
PTPA-210	ENST00000414510	PIP4K2A	P48426	406 aa	Predicted RBP	32.01	■■■□□ 2.71
PTPA-210	ENST00000414510	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.01	■■■□□ 2.71
PTPA-210	ENST00000414510	SCN7A	Q01118	1682 aa		32	■■■□□ 2.71
PTPA-210	ENST00000414510	APAF1	O14727	1248 aa		32	■■■□□ 2.71
PTPA-210	ENST00000414510	FKBP8	Q14318	412 aa		32	■■■□□ 2.71
PTPA-210	ENST00000414510	USPL1	Q5W0Q7	1092 aa		32	■■■□□ 2.71
PTPA-210	ENST00000414510	NLGN1	Q8N2Q7	840 aa		32	■■■□□ 2.71
PTPA-210	ENST00000414510	EIF5	P55010	431 aa	Known RBP	31.99	■■■□□ 2.71
PTPA-210	ENST00000414510	EIF4A1	P60842	406 aa	Known RBP	31.99	■■■□□ 2.71
PTPA-210	ENST00000414510	TSPYL4	Q9UJ04	414 aa		31.99	■■■□□ 2.71
PTPA-210	ENST00000414510	ZPR1	O75312	459 aa		31.97	■■■□□ 2.71
PTPA-210	ENST00000414510	NARF	Q9UHQ1	456 aa		31.96	■■■□□ 2.71
PTPA-210	ENST00000414510	BCOR	Q6W2J9	1755 aa		31.95	■■■□□ 2.71
PTPA-210	ENST00000414510	SENP3-EIF4A1	A0A087X0R7	540 aa		31.95	■■■□□ 2.71
PTPA-210	ENST00000414510	KIF13B	Q9NQT8	1826 aa		31.94	■■■□□ 2.7
PTPA-210	ENST00000414510	IL6ST	P40189	918 aa	Predicted RBP	31.94	■■■□□ 2.7
PTPA-210	ENST00000414510	BCL2L12	Q9HB09	334 aa		31.94	■■■□□ 2.7
PTPA-210	ENST00000414510	GIGYF1	O75420	1035 aa	Predicted RBP	31.93	■■■□□ 2.7
PTPA-210	ENST00000414510	DDR1	Q08345	913 aa		31.92	■■■□□ 2.7
PTPA-210	ENST00000414510	LAS1L	Q9Y4W2	734 aa	Known RBP	31.92	■■■□□ 2.7
PTPA-210	ENST00000414510	CD2AP	Q9Y5K6	639 aa		31.92	■■■□□ 2.7
PTPA-210	ENST00000414510	KIAA1551	Q9HCM1	1747 aa		31.92	■■■□□ 2.7
PTPA-210	ENST00000414510	TBC1D2B	Q9UPU7	963 aa		31.91	■■■□□ 2.7
PTPA-210	ENST00000414510	PARP3	Q9Y6F1	533 aa		31.91	■■■□□ 2.7
PTPA-210	ENST00000414510		A0A087WZG4	1122 aa		31.9	■■■□□ 2.7
PTPA-210	ENST00000414510	NBPF26	B4DH59	902 aa		31.9	■■■□□ 2.7
PTPA-210	ENST00000414510	NBPF10	Q6P3W6	841 aa	Known RBP	31.9	■■■□□ 2.7
PTPA-210	ENST00000414510	NBPF15	Q8N660	670 aa		31.9	■■■□□ 2.7
PTPA-210	ENST00000414510	C10orf71	Q711Q0	1435 aa		31.9	■■■□□ 2.7
PTPA-210	ENST00000414510	AFDN	P55196	1824 aa	Known RBP	31.89	■■■□□ 2.7
PTPA-210	ENST00000414510	BABAM1	Q9NWV8	329 aa		31.88	■■■□□ 2.69
PTPA-210	ENST00000414510	N4BP2	Q86UW6	1770 aa	Predicted RBP	31.88	■■■□□ 2.69
PTPA-210	ENST00000414510	DCAF8L1	A6NGE4	600 aa		31.87	■■■□□ 2.69
PTPA-210	ENST00000414510	CHL1	O00533	1208 aa		31.87	■■■□□ 2.69
PTPA-210	ENST00000414510	NFIX	Q14938	502 aa		31.87	■■■□□ 2.69
PTPA-210	ENST00000414510	POLRMT	O00411	1230 aa	Known RBP	31.86	■■■□□ 2.69
PTPA-210	ENST00000414510	TM4SF1	P30408	202 aa		31.86	■■■□□ 2.69
PTPA-210	ENST00000414510	PELP1	Q8IZL8	1130 aa	Known RBP	31.86	■■■□□ 2.69
PTPA-210	ENST00000414510	KRT24	Q2M2I5	525 aa		31.85	■■■□□ 2.69
PTPA-210	ENST00000414510	DZIP3	Q86Y13	1208 aa	Known RBP	31.85	■■■□□ 2.69
PTPA-210	ENST00000414510	NRXN2	Q9P2S2	1712 aa		31.85	■■■□□ 2.69
PTPA-210	ENST00000414510	CAMTA2	O94983	1202 aa		31.84	■■■□□ 2.69
PTPA-210	ENST00000414510	NPM2	Q86SE8	214 aa	Known RBP	31.84	■■■□□ 2.69
PTPA-210	ENST00000414510	PXDNL	A1KZ92	1463 aa		31.84	■■■□□ 2.69
PTPA-210	ENST00000414510	BICDL1	Q6ZP65	573 aa		31.83	■■■□□ 2.69
PTPA-210	ENST00000414510	WWC3	Q9ULE0	1092 aa		31.83	■■■□□ 2.69
PTPA-210	ENST00000414510	GPR162	Q16538	588 aa		31.82	■■■□□ 2.68
PTPA-210	ENST00000414510	TBC1D9B	Q66K14	1250 aa		31.82	■■■□□ 2.68
PTPA-210	ENST00000414510	FAM9B	Q8IZU0	186 aa		31.8	■■■□□ 2.68
PTPA-210	ENST00000414510	CFAP44	Q96MT7	982 aa		31.8	■■■□□ 2.68
PTPA-210	ENST00000414510	YBX3	P16989	372 aa	Known RBP eCLIP	31.79	■■■□□ 2.68	9e-8	■□□□□ 11.1
PTPA-210	ENST00000414510	EIF2S2	P20042	333 aa	Known RBP	31.79	■■■□□ 2.68
PTPA-210	ENST00000414510	NGEF	Q8N5V2	710 aa		31.79	■■■□□ 2.68
PTPA-210	ENST00000414510	MBIP	Q9NS73	344 aa		31.79	■■■□□ 2.68
PTPA-210	ENST00000414510	MYL6B	P14649	208 aa		31.78	■■■□□ 2.68
PTPA-210	ENST00000414510	ZNF853	P0CG23	659 aa		31.77	■■■□□ 2.68
PTPA-210	ENST00000414510	NECTIN2	Q92692	538 aa		31.77	■■■□□ 2.68
PTPA-210	ENST00000414510	SERPINB2	P05120	415 aa		31.76	■■■□□ 2.67
PTPA-210	ENST00000414510	IFT57	Q9NWB7	429 aa		31.75	■■■□□ 2.67
PTPA-210	ENST00000414510	BRCA1	P38398	1863 aa	Known RBP	31.75	■■■□□ 2.67
PTPA-210	ENST00000414510	CARMIL3	Q8ND23	1372 aa		31.74	■■■□□ 2.67
PTPA-210	ENST00000414510		A0A0G2JLW4	131 aa		31.73	■■■□□ 2.67
PTPA-210	ENST00000414510	ANXA1	P04083	346 aa		31.73	■■■□□ 2.67
PTPA-210	ENST00000414510	CALD1	Q05682	793 aa	Known RBP	31.73	■■■□□ 2.67
PTPA-210	ENST00000414510	PROSER3	Q2NL68	480 aa		31.73	■■■□□ 2.67
PTPA-210	ENST00000414510	ERBB4	Q15303	1308 aa		31.73	■■■□□ 2.67
PTPA-210	ENST00000414510	DPEP1	P16444	411 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	TGFB2	P61812	414 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	GNAI1	P63096	354 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	PDIA6	Q15084	440 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	TTLL7	Q6ZT98	887 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	SALL2	Q9Y467	1007 aa	Predicted RBP	31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	NUP98	P52948	1817 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	ANKRD31	Q8N7Z5	1873 aa		31.72	■■■□□ 2.67
PTPA-210	ENST00000414510	CCDC27	Q2M243	656 aa		31.71	■■■□□ 2.67
PTPA-210	ENST00000414510	WWC1	Q8IX03	1113 aa		31.71	■■■□□ 2.67
PTPA-210	ENST00000414510	CHD4	Q14839	1912 aa		31.71	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms