RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 CANXP27824 592 aaKnown RBP19.23■□□□□ 0.67
CHD1-202ENST00000414220 SMIM5Q71RC9 77 aa19.22■□□□□ 0.67
CHD1-202ENST00000414220 AMIGO3Q86WK7 504 aa19.22■□□□□ 0.67
CHD1-202ENST00000414220 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
CHD1-202ENST00000414220 ZBTB1Q9Y2K1 713 aa19.22■□□□□ 0.67
CHD1-202ENST00000414220 SIPA1L3O60292 1781 aaPredicted RBP19.21■□□□□ 0.67
CHD1-202ENST00000414220 CICQ96RK0 1608 aaPredicted RBP19.21■□□□□ 0.67
CHD1-202ENST00000414220 SOS1Q07889 1333 aaPredicted RBP19.21■□□□□ 0.67
CHD1-202ENST00000414220 UBR3Q6ZT12 1888 aa19.2■□□□□ 0.66
CHD1-202ENST00000414220 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
CHD1-202ENST00000414220 IL6STP40189 918 aaPredicted RBP19.2■□□□□ 0.66
CHD1-202ENST00000414220 FHDC1Q9C0D6 1143 aaPredicted RBP19.2■□□□□ 0.66
CHD1-202ENST00000414220 TRIM35Q9UPQ4 493 aa19.2■□□□□ 0.66
CHD1-202ENST00000414220 LAS1LQ9Y4W2 734 aaKnown RBP19.2■□□□□ 0.66
CHD1-202ENST00000414220 TUBGCP6Q96RT7 1819 aa19.2■□□□□ 0.66
CHD1-202ENST00000414220 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
CHD1-202ENST00000414220 ZNF330Q9Y3S2 320 aaPredicted RBP19.19■□□□□ 0.66
CHD1-202ENST00000414220 DLG5Q8TDM6 1919 aa19.19■□□□□ 0.66
CHD1-202ENST00000414220 TJP1Q07157 1748 aa19.19■□□□□ 0.66
CHD1-202ENST00000414220 UBR2Q8IWV8 1755 aa19.19■□□□□ 0.66
CHD1-202ENST00000414220 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
CHD1-202ENST00000414220 SYT17Q9BSW7 474 aa19.18■□□□□ 0.66
CHD1-202ENST00000414220 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
CHD1-202ENST00000414220 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
CHD1-202ENST00000414220 COL15A1P39059 1388 aa19.18■□□□□ 0.66
CHD1-202ENST00000414220 GYS1P13807 737 aa19.17■□□□□ 0.66
CHD1-202ENST00000414220 EIF5P55010 431 aaKnown RBP19.17■□□□□ 0.66
CHD1-202ENST00000414220 PARP3Q9Y6F1 533 aa19.17■□□□□ 0.66
CHD1-202ENST00000414220 USP42Q9H9J4 1324 aaKnown RBP19.17■□□□□ 0.66
CHD1-202ENST00000414220 GIGYF1O75420 1035 aaPredicted RBP19.16■□□□□ 0.66
CHD1-202ENST00000414220 A1BGP04217 495 aa19.16■□□□□ 0.66
CHD1-202ENST00000414220 MMP10P09238 476 aa19.16■□□□□ 0.66
CHD1-202ENST00000414220 GNAI1P63096 354 aa19.16■□□□□ 0.66
CHD1-202ENST00000414220 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
CHD1-202ENST00000414220 CFAP44Q96MT7 982 aa19.16■□□□□ 0.66
CHD1-202ENST00000414220 CHL1O00533 1208 aa19.15■□□□□ 0.66
CHD1-202ENST00000414220 USPL1Q5W0Q7 1092 aa19.15■□□□□ 0.66
CHD1-202ENST00000414220 CD2APQ9Y5K6 639 aa19.15■□□□□ 0.66
CHD1-202ENST00000414220 SRCAPQ6ZRS2 3230 aa19.14■□□□□ 0.66
CHD1-202ENST00000414220 CCDC27Q2M243 656 aa19.14■□□□□ 0.65
CHD1-202ENST00000414220 SRP68Q9UHB9 627 aaKnown RBP19.14■□□□□ 0.65
CHD1-202ENST00000414220 MYH14Q7Z406 1995 aaKnown RBP19.13■□□□□ 0.65
CHD1-202ENST00000414220 PRAMEF22A3QJZ6 481 aa19.13■□□□□ 0.65
CHD1-202ENST00000414220 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
CHD1-202ENST00000414220 CHMP4AQ9BY43 222 aa19.13■□□□□ 0.65
CHD1-202ENST00000414220 IFT57Q9NWB7 429 aa19.13■□□□□ 0.65
CHD1-202ENST00000414220 CCER2I3L3R5 266 aa19.12■□□□□ 0.65
CHD1-202ENST00000414220 ERBB4Q15303 1308 aa19.11■□□□□ 0.65
CHD1-202ENST00000414220 FKBP8Q14318 412 aa19.11■□□□□ 0.65
CHD1-202ENST00000414220 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
CHD1-202ENST00000414220 DZIP3Q86Y13 1208 aaKnown RBP19.11■□□□□ 0.65
CHD1-202ENST00000414220 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
CHD1-202ENST00000414220 ZNF652Q9Y2D9 606 aa19.11■□□□□ 0.65
CHD1-202ENST00000414220 EIF2S2P20042 333 aaKnown RBP19.1■□□□□ 0.65
CHD1-202ENST00000414220 COL24A1Q17RW2 1714 aa19.09■□□□□ 0.65
CHD1-202ENST00000414220 HOXB7P09629 217 aa19.09■□□□□ 0.65
CHD1-202ENST00000414220 KDM3BQ7LBC6 1761 aa19.09■□□□□ 0.65
CHD1-202ENST00000414220 WWC1Q8IX03 1113 aa19.08■□□□□ 0.64
CHD1-202ENST00000414220 RGL2O15211 777 aa19.07■□□□□ 0.64
CHD1-202ENST00000414220 ZNF853P0CG23 659 aa19.07■□□□□ 0.64
CHD1-202ENST00000414220 TM4SF1P30408 202 aa19.07■□□□□ 0.64
CHD1-202ENST00000414220 PIP4K2AP48426 406 aaPredicted RBP19.07■□□□□ 0.64
CHD1-202ENST00000414220 CLEC4GQ6UXB4 293 aa19.07■□□□□ 0.64
CHD1-202ENST00000414220 KIF6Q6ZMV9 814 aa19.07■□□□□ 0.64
CHD1-202ENST00000414220 MBIPQ9NS73 344 aa19.07■□□□□ 0.64
CHD1-202ENST00000414220 NBPF26B4DH59 902 aa19.06■□□□□ 0.64
CHD1-202ENST00000414220 NPHP1O15259 732 aa19.06■□□□□ 0.64
CHD1-202ENST00000414220 MYL6BP14649 208 aa19.06■□□□□ 0.64
CHD1-202ENST00000414220 GPR162Q16538 588 aa19.06■□□□□ 0.64
CHD1-202ENST00000414220 NBPF10Q6P3W6 841 aaKnown RBP19.06■□□□□ 0.64
CHD1-202ENST00000414220 NBPF15Q8N660 670 aa19.06■□□□□ 0.64
CHD1-202ENST00000414220 SETDB2Q96T68 719 aa19.06■□□□□ 0.64
CHD1-202ENST00000414220 SALL2Q9Y467 1007 aaPredicted RBP19.06■□□□□ 0.64
CHD1-202ENST00000414220 IL16Q14005 1332 aa19.05■□□□□ 0.64
CHD1-202ENST00000414220 TGFB2P61812 414 aa19.05■□□□□ 0.64
CHD1-202ENST00000414220 NFIXQ14938 502 aa19.05■□□□□ 0.64
CHD1-202ENST00000414220 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
CHD1-202ENST00000414220 WDR63Q8IWG1 891 aa19.05■□□□□ 0.64
CHD1-202ENST00000414220 POLRMTO00411 1230 aaKnown RBP19.04■□□□□ 0.64
CHD1-202ENST00000414220 CAMTA2O94983 1202 aa19.04■□□□□ 0.64
CHD1-202ENST00000414220 SERPINB2P05120 415 aa19.04■□□□□ 0.64
CHD1-202ENST00000414220 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
CHD1-202ENST00000414220 DUSP27Q5VZP5 1158 aa19.04■□□□□ 0.64
CHD1-202ENST00000414220 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
CHD1-202ENST00000414220 BCL2L12Q9HB09 334 aa19.04■□□□□ 0.64
CHD1-202ENST00000414220 C4AP0C0L4 1744 aa19.03■□□□□ 0.64
CHD1-202ENST00000414220 NLGN2Q8NFZ4 835 aa19.03■□□□□ 0.64
CHD1-202ENST00000414220 SENP3-EIF4A1A0A087X0R7 540 aa19.02■□□□□ 0.64
CHD1-202ENST00000414220 ERVV-1B6SEH8 477 aa19.02■□□□□ 0.64
CHD1-202ENST00000414220 DDR1Q08345 913 aa19.02■□□□□ 0.64
CHD1-202ENST00000414220 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.64
CHD1-202ENST00000414220 GRIN3BO60391 1043 aa19.01■□□□□ 0.63
CHD1-202ENST00000414220 TBC1D9BQ66K14 1250 aa19.01■□□□□ 0.63
CHD1-202ENST00000414220 NECTIN2Q92692 538 aa19.01■□□□□ 0.63
CHD1-202ENST00000414220 DDX21Q9NR30 783 aaKnown RBP eCLIP19.01■□□□□ 0.63
CHD1-202ENST00000414220 CARMIL3Q8ND23 1372 aa19.01■□□□□ 0.63
CHD1-202ENST00000414220 LAMB4A4D0S4 1761 aa19.01■□□□□ 0.63
CHD1-202ENST00000414220 KRT24Q2M2I5 525 aa19■□□□□ 0.63
CHD1-202ENST00000414220 MAP3K15Q6ZN16 1313 aa19■□□□□ 0.63
CHD1-202ENST00000414220 MYH16Q9H6N6 1097 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms