RNA–Protein interactions for RNA: ENST00000412828.1

AC003087.1-201, humanhuman

TSL 3 BASIC

Gene AC003087.1, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003087.1-201ENST00000412828 ASAP1Q9ULH1 1129 aa12.93□□□□□ -0.34
AC003087.1-201ENST00000412828 DICER1Q9UPY3 1922 aaKnown RBP12.93□□□□□ -0.34
AC003087.1-201ENST00000412828 ITGB4P16144 1822 aa12.92□□□□□ -0.34
AC003087.1-201ENST00000412828 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
AC003087.1-201ENST00000412828 TM4SF1P30408 202 aa12.92□□□□□ -0.34
AC003087.1-201ENST00000412828 HOXC9P31274 260 aa12.91□□□□□ -0.34
AC003087.1-201ENST00000412828 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
AC003087.1-201ENST00000412828 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
AC003087.1-201ENST00000412828 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
AC003087.1-201ENST00000412828 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
AC003087.1-201ENST00000412828 USP42Q9H9J4 1324 aaKnown RBP12.9□□□□□ -0.34
AC003087.1-201ENST00000412828 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
AC003087.1-201ENST00000412828 CST9Q5W186 159 aa12.9□□□□□ -0.34
AC003087.1-201ENST00000412828 CIAPIN1Q6FI81 312 aa12.9□□□□□ -0.34
AC003087.1-201ENST00000412828 HHIPL1Q96JK4 782 aa12.9□□□□□ -0.34
AC003087.1-201ENST00000412828 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
AC003087.1-201ENST00000412828 H0YIN7 160 aa12.89□□□□□ -0.35
AC003087.1-201ENST00000412828 C21orf2O43822 256 aa12.89□□□□□ -0.35
AC003087.1-201ENST00000412828 C2CD5Q86YS7 1000 aa12.89□□□□□ -0.35
AC003087.1-201ENST00000412828 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
AC003087.1-201ENST00000412828 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
AC003087.1-201ENST00000412828 CTU1Q7Z7A3 348 aaKnown RBP12.88□□□□□ -0.35
AC003087.1-201ENST00000412828 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
AC003087.1-201ENST00000412828 USHBP1Q8N6Y0 703 aa12.88□□□□□ -0.35
AC003087.1-201ENST00000412828 ATG3Q9NT62 314 aa12.88□□□□□ -0.35
AC003087.1-201ENST00000412828 KDRP35968 1356 aa12.88□□□□□ -0.35
AC003087.1-201ENST00000412828 INSRP06213 1382 aa12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 AMPHP49418 695 aa12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 SAPCD2Q86UD0 394 aa12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 SAGE1Q9NXZ1 904 aa12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 MON2Q7Z3U7 1717 aa12.87□□□□□ -0.35
AC003087.1-201ENST00000412828 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
AC003087.1-201ENST00000412828 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
AC003087.1-201ENST00000412828 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
AC003087.1-201ENST00000412828 NOGQ13253 232 aa12.85□□□□□ -0.35
AC003087.1-201ENST00000412828 PKN2Q16513 984 aaKnown RBP12.85□□□□□ -0.35
AC003087.1-201ENST00000412828 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
AC003087.1-201ENST00000412828 ZNF831Q5JPB2 1677 aa12.85□□□□□ -0.35
AC003087.1-201ENST00000412828 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
AC003087.1-201ENST00000412828 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
AC003087.1-201ENST00000412828 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
AC003087.1-201ENST00000412828 ZNF622Q969S3 477 aaKnown RBP eCLIP12.83□□□□□ -0.36
AC003087.1-201ENST00000412828 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.36
AC003087.1-201ENST00000412828 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
AC003087.1-201ENST00000412828 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
AC003087.1-201ENST00000412828 TRAF5O00463 557 aa12.82□□□□□ -0.36
AC003087.1-201ENST00000412828 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
AC003087.1-201ENST00000412828 COL5A3P25940 1745 aaPredicted RBP12.82□□□□□ -0.36
AC003087.1-201ENST00000412828 ZPR1O75312 459 aa12.81□□□□□ -0.36
AC003087.1-201ENST00000412828 SERPINB2P05120 415 aa12.81□□□□□ -0.36
AC003087.1-201ENST00000412828 NRXN2Q9P2S2 1712 aa12.81□□□□□ -0.36
AC003087.1-201ENST00000412828 RTL1A6NKG5 1358 aa12.81□□□□□ -0.36
AC003087.1-201ENST00000412828 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
AC003087.1-201ENST00000412828 CRKLP46109 303 aaKnown RBP12.8□□□□□ -0.36
AC003087.1-201ENST00000412828 NFIXQ14938 502 aa12.8□□□□□ -0.36
AC003087.1-201ENST00000412828 USPL1Q5W0Q7 1092 aa12.8□□□□□ -0.36
AC003087.1-201ENST00000412828 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
AC003087.1-201ENST00000412828 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
AC003087.1-201ENST00000412828 HDGFL2Q7Z4V5 671 aaPredicted RBP12.79□□□□□ -0.36
AC003087.1-201ENST00000412828 PPARGC1BQ86YN6 1023 aaKnown RBP12.79□□□□□ -0.36
AC003087.1-201ENST00000412828 GPC2Q8N158 579 aa12.79□□□□□ -0.36
AC003087.1-201ENST00000412828 TRPM7Q96QT4 1865 aa12.78□□□□□ -0.36
AC003087.1-201ENST00000412828 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
AC003087.1-201ENST00000412828 ZIC5Q96T25 663 aa12.78□□□□□ -0.36
AC003087.1-201ENST00000412828 AFDNP55196 1824 aaKnown RBP12.77□□□□□ -0.37
AC003087.1-201ENST00000412828 TRPA1O75762 1119 aa12.77□□□□□ -0.37
AC003087.1-201ENST00000412828 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
AC003087.1-201ENST00000412828 PDE6BP35913 854 aa12.77□□□□□ -0.37
AC003087.1-201ENST00000412828 RNF186Q9NXI6 227 aa12.77□□□□□ -0.37
AC003087.1-201ENST00000412828 CARMIL3Q8ND23 1372 aa12.77□□□□□ -0.37
AC003087.1-201ENST00000412828 FZD9O00144 591 aa12.76□□□□□ -0.37
AC003087.1-201ENST00000412828 USP50Q70EL3 339 aaPredicted RBP12.76□□□□□ -0.37
AC003087.1-201ENST00000412828 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
AC003087.1-201ENST00000412828 FBLN1P23142 703 aa12.75□□□□□ -0.37
AC003087.1-201ENST00000412828 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
AC003087.1-201ENST00000412828 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
AC003087.1-201ENST00000412828 COG3Q96JB2 828 aa12.75□□□□□ -0.37
AC003087.1-201ENST00000412828 BRIP1Q9BX63 1249 aa12.75□□□□□ -0.37
AC003087.1-201ENST00000412828 PRPF40BQ6NWY9 871 aaKnown RBP12.74□□□□□ -0.37
AC003087.1-201ENST00000412828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC003087.1-201ENST00000412828 PHKG2P15735 406 aa12.73□□□□□ -0.37
AC003087.1-201ENST00000412828 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
AC003087.1-201ENST00000412828 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
AC003087.1-201ENST00000412828 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
AC003087.1-201ENST00000412828 HDAC9Q9UKV0 1011 aa12.73□□□□□ -0.37
AC003087.1-201ENST00000412828 SZT2Q5T011 3432 aa12.73□□□□□ -0.37
AC003087.1-201ENST00000412828 STYK1Q6J9G0 422 aa12.72□□□□□ -0.37
AC003087.1-201ENST00000412828 INTS5Q6P9B9 1019 aaKnown RBP12.72□□□□□ -0.37
AC003087.1-201ENST00000412828 FBXO46Q6PJ61 603 aaPredicted RBP12.72□□□□□ -0.37
AC003087.1-201ENST00000412828 ZNF277Q9NRM2 450 aaPredicted RBP12.72□□□□□ -0.37
AC003087.1-201ENST00000412828 A0A0C4DFX4 3053 aa12.72□□□□□ -0.37
AC003087.1-201ENST00000412828 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
AC003087.1-201ENST00000412828 EPS15P42566 896 aa12.71□□□□□ -0.37
AC003087.1-201ENST00000412828 KIF23Q02241 960 aaPredicted RBP12.71□□□□□ -0.37
AC003087.1-201ENST00000412828 SYNE4Q8N205 404 aa12.71□□□□□ -0.37
AC003087.1-201ENST00000412828 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
AC003087.1-201ENST00000412828 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
AC003087.1-201ENST00000412828 FAM155AB1AL88 458 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms