RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
AC004009.1-201ENST00000412413 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
AC004009.1-201ENST00000412413 NLGN1Q8N2Q7 840 aa11.2□□□□□ -0.62
AC004009.1-201ENST00000412413 PARP3Q9Y6F1 533 aa11.2□□□□□ -0.62
AC004009.1-201ENST00000412413 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 CLCN6P51797 869 aa11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 SRP68Q9UHB9 627 aaKnown RBP11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
AC004009.1-201ENST00000412413 COL24A1Q17RW2 1714 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 RPS6KA4O75676 772 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 FCHSD2O94868 740 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 GYS1P13807 737 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 DPEP1P16444 411 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 IFNL1Q8IU54 200 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
AC004009.1-201ENST00000412413 KDRP35968 1356 aa11.17□□□□□ -0.62
AC004009.1-201ENST00000412413 CRKLP46109 303 aaKnown RBP11.17□□□□□ -0.62
AC004009.1-201ENST00000412413 RC3H1Q5TC82 1133 aaKnown RBP11.17□□□□□ -0.62
AC004009.1-201ENST00000412413 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
AC004009.1-201ENST00000412413 KDM6AO15550 1401 aaPredicted RBP11.17□□□□□ -0.62
AC004009.1-201ENST00000412413 GOLGB1Q14789 3259 aaKnown RBP11.17□□□□□ -0.62
AC004009.1-201ENST00000412413 ADCY9O60503 1353 aa11.16□□□□□ -0.62
AC004009.1-201ENST00000412413 CNTNAP4Q9C0A0 1308 aa11.16□□□□□ -0.62
AC004009.1-201ENST00000412413 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
AC004009.1-201ENST00000412413 TGFB2P61812 414 aa11.16□□□□□ -0.62
AC004009.1-201ENST00000412413 TAOK2Q9UL54 1235 aa11.16□□□□□ -0.62
AC004009.1-201ENST00000412413 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
AC004009.1-201ENST00000412413 ITGB4P16144 1822 aa11.15□□□□□ -0.62
AC004009.1-201ENST00000412413 HMOX1P09601 288 aa11.15□□□□□ -0.62
AC004009.1-201ENST00000412413 HSPA6P17066 643 aa11.15□□□□□ -0.62
AC004009.1-201ENST00000412413 IL13P35225 146 aa11.15□□□□□ -0.62
AC004009.1-201ENST00000412413 CICQ96RK0 1608 aaPredicted RBP11.14□□□□□ -0.63
AC004009.1-201ENST00000412413 KIF3CO14782 793 aa11.14□□□□□ -0.63
AC004009.1-201ENST00000412413 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
AC004009.1-201ENST00000412413 GABBR2O75899 941 aa11.14□□□□□ -0.63
AC004009.1-201ENST00000412413 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
AC004009.1-201ENST00000412413 TAF1LQ8IZX4 1826 aa11.14□□□□□ -0.63
AC004009.1-201ENST00000412413 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 ZPR1O75312 459 aa11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 CHRNA5P30532 468 aa11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 SLC39A6Q13433 755 aa11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 C9orf131Q5VYM1 1079 aa11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 LGR6Q9HBX8 967 aa11.13□□□□□ -0.63
AC004009.1-201ENST00000412413 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 DDR1Q08345 913 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 DALRD3Q5D0E6 543 aaKnown RBP11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 USPL1Q5W0Q7 1092 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 PIM2Q9P1W9 311 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 ANKRD26Q9UPS8 1709 aa11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 MAP2P11137 1827 aaKnown RBP11.12□□□□□ -0.63
AC004009.1-201ENST00000412413 USP42Q9H9J4 1324 aaKnown RBP11.11□□□□□ -0.63
AC004009.1-201ENST00000412413 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
AC004009.1-201ENST00000412413 SLC52A2Q9HAB3 445 aa11.11□□□□□ -0.63
AC004009.1-201ENST00000412413 RNF181Q9P0P0 153 aa11.11□□□□□ -0.63
AC004009.1-201ENST00000412413 PLEKHG2Q9H7P9 1386 aa11.11□□□□□ -0.63
AC004009.1-201ENST00000412413 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
AC004009.1-201ENST00000412413 KCNA3P22001 575 aa11.1□□□□□ -0.63
AC004009.1-201ENST00000412413 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
AC004009.1-201ENST00000412413 POLRMTO00411 1230 aaKnown RBP11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 MTHFSDQ2M296 383 aaKnown RBP11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 IFFO2Q5TF58 517 aa11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 BICDL1Q6ZP65 573 aa11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 KIF7Q2M1P5 1343 aa11.09□□□□□ -0.63
AC004009.1-201ENST00000412413 TOMM70O94826 608 aa11.08□□□□□ -0.64
AC004009.1-201ENST00000412413 CYP19A1P11511 503 aaPredicted RBP11.08□□□□□ -0.64
AC004009.1-201ENST00000412413 PSEN1P49768 467 aa11.08□□□□□ -0.64
AC004009.1-201ENST00000412413 ZBTB1Q9Y2K1 713 aa11.08□□□□□ -0.64
AC004009.1-201ENST00000412413 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
AC004009.1-201ENST00000412413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 TM4SF1P30408 202 aa11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 APLP1P51693 650 aa11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 RASSF7Q02833 373 aa11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 NFIXQ14938 502 aa11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 TTC5Q8N0Z6 440 aa11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
AC004009.1-201ENST00000412413 CEP350Q5VT06 3117 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 SERPINB2P05120 415 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 HTRA3P83110 453 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 RRAGCQ9HB90 399 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 NARFQ9UHQ1 456 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 C4AP0C0L4 1744 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
AC004009.1-201ENST00000412413 STK25O00506 426 aa11.05□□□□□ -0.64
AC004009.1-201ENST00000412413 TEFQ10587 303 aa11.05□□□□□ -0.64
AC004009.1-201ENST00000412413 C2CD5Q86YS7 1000 aa11.05□□□□□ -0.64
AC004009.1-201ENST00000412413 CCDC24Q8N4L8 307 aa11.05□□□□□ -0.64
AC004009.1-201ENST00000412413 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms