RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 SSFA2P28290 1259 aa20.12■□□□□ 0.81
TRAPPC12-203ENST00000411973 CCDC87Q9NVE4 849 aa20.12■□□□□ 0.81
TRAPPC12-203ENST00000411973 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC12-203ENST00000411973 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
TRAPPC12-203ENST00000411973 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
TRAPPC12-203ENST00000411973 AMIGO3Q86WK7 504 aa20.11■□□□□ 0.81
TRAPPC12-203ENST00000411973 PDGFDQ9GZP0 370 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC12-203ENST00000411973 MBIPQ9NS73 344 aa20.11■□□□□ 0.81
TRAPPC12-203ENST00000411973 RTCBQ9Y3I0 505 aaKnown RBP20.11■□□□□ 0.81
TRAPPC12-203ENST00000411973 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
TRAPPC12-203ENST00000411973 PRAMEF22A3QJZ6 481 aa20.1■□□□□ 0.81
TRAPPC12-203ENST00000411973 COL23A1Q86Y22 540 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC12-203ENST00000411973 USP16Q9Y5T5 823 aa20.1■□□□□ 0.81
TRAPPC12-203ENST00000411973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.09■□□□□ 0.81
TRAPPC12-203ENST00000411973 ADRA2BP18089 450 aa20.09■□□□□ 0.81
TRAPPC12-203ENST00000411973 SLC16A10Q8TF71 515 aa20.08■□□□□ 0.81
TRAPPC12-203ENST00000411973 ZBTB1Q9Y2K1 713 aa20.08■□□□□ 0.81
TRAPPC12-203ENST00000411973 TRAPPC3LQ5T215 181 aa20.07■□□□□ 0.8
TRAPPC12-203ENST00000411973 SOS1Q07889 1333 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC12-203ENST00000411973 PHF14O94880 888 aa20.06■□□□□ 0.8
TRAPPC12-203ENST00000411973 SMIM5Q71RC9 77 aa20.06■□□□□ 0.8
TRAPPC12-203ENST00000411973 A1BGP04217 495 aa20.05■□□□□ 0.8
TRAPPC12-203ENST00000411973 HOXB7P09629 217 aa20.05■□□□□ 0.8
TRAPPC12-203ENST00000411973 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
TRAPPC12-203ENST00000411973 C4AP0C0L4 1744 aa20.05■□□□□ 0.8
TRAPPC12-203ENST00000411973 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
TRAPPC12-203ENST00000411973 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
TRAPPC12-203ENST00000411973 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
TRAPPC12-203ENST00000411973 KRT24Q2M2I5 525 aa20.04■□□□□ 0.8
TRAPPC12-203ENST00000411973 ARHGEF1Q92888 912 aaKnown RBP20.04■□□□□ 0.8
TRAPPC12-203ENST00000411973 MTFR1LQ9H019 292 aa20.04■□□□□ 0.8
TRAPPC12-203ENST00000411973 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
TRAPPC12-203ENST00000411973 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
TRAPPC12-203ENST00000411973 ERBB4Q15303 1308 aa20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 MSH5O43196 834 aa20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 ZBTB7AO95365 584 aa20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 COL15A1P39059 1388 aa20.02■□□□□ 0.8
TRAPPC12-203ENST00000411973 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.79
TRAPPC12-203ENST00000411973 RFC4P35249 363 aa20.01■□□□□ 0.79
TRAPPC12-203ENST00000411973 GOLGA2Q08379 1002 aa20.01■□□□□ 0.79
TRAPPC12-203ENST00000411973 DUSP27Q5VZP5 1158 aa20.01■□□□□ 0.79
TRAPPC12-203ENST00000411973 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
TRAPPC12-203ENST00000411973 SRCAPQ6ZRS2 3230 aa20■□□□□ 0.79
TRAPPC12-203ENST00000411973 A0A087WZG4 1122 aa20■□□□□ 0.79
TRAPPC12-203ENST00000411973 C8orf58Q8NAV2 365 aa20■□□□□ 0.79
TRAPPC12-203ENST00000411973 SPON1Q9HCB6 807 aa20■□□□□ 0.79
TRAPPC12-203ENST00000411973 LRP5O75197 1615 aa20■□□□□ 0.79
TRAPPC12-203ENST00000411973 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
TRAPPC12-203ENST00000411973 NARFQ9UHQ1 456 aa19.99■□□□□ 0.79
TRAPPC12-203ENST00000411973 USP42Q9H9J4 1324 aaKnown RBP19.99■□□□□ 0.79
TRAPPC12-203ENST00000411973 E9PSI1 815 aa19.98■□□□□ 0.79
TRAPPC12-203ENST00000411973 PIP4K2AP48426 406 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC12-203ENST00000411973 SGIP1Q9BQI5 828 aa19.98■□□□□ 0.79
TRAPPC12-203ENST00000411973 ATF5Q9Y2D1 282 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC12-203ENST00000411973 GYS1P13807 737 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 PTGER2P43116 358 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 HNRNPUQ00839 825 aaKnown RBP eCLIP19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 SLFN5Q08AF3 891 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 PDIA6Q15084 440 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 HDGFL1Q5TGJ6 251 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 NPM2Q86SE8 214 aaKnown RBP19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 TSPYL6Q8N831 410 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 CHMP4AQ9BY43 222 aa19.97■□□□□ 0.79
TRAPPC12-203ENST00000411973 ELL2O00472 640 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC12-203ENST00000411973 ZPR1O75312 459 aa19.96■□□□□ 0.79
TRAPPC12-203ENST00000411973 NLGN1Q8N2Q7 840 aa19.96■□□□□ 0.79
TRAPPC12-203ENST00000411973 SRP68Q9UHB9 627 aaKnown RBP19.96■□□□□ 0.79
TRAPPC12-203ENST00000411973 LRP10Q7Z4F1 713 aa19.95■□□□□ 0.78
TRAPPC12-203ENST00000411973 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
TRAPPC12-203ENST00000411973 ZNF330Q9Y3S2 320 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC12-203ENST00000411973 SCN7AQ01118 1682 aa19.94■□□□□ 0.78
TRAPPC12-203ENST00000411973 EXOSC9Q06265 439 aaKnown RBP19.94■□□□□ 0.78
TRAPPC12-203ENST00000411973 TWISTNBQ3B726 338 aaPredicted RBP19.94■□□□□ 0.78
TRAPPC12-203ENST00000411973 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
TRAPPC12-203ENST00000411973 TRMT2AQ8IZ69 625 aaKnown RBP19.94■□□□□ 0.78
TRAPPC12-203ENST00000411973 TBC1D2BQ9UPU7 963 aa19.94■□□□□ 0.78
TRAPPC12-203ENST00000411973 BCORQ6W2J9 1755 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 RGL2O15211 777 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 MYL6BP14649 208 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 PROSER3Q2NL68 480 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 NECTIN2Q92692 538 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 CDCA7LQ96GN5 454 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 CHPF2Q9P2E5 772 aa19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 DBF4Q9UBU7 674 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC12-203ENST00000411973 CAMTA2O94983 1202 aa19.92■□□□□ 0.78
TRAPPC12-203ENST00000411973 POLD1P28340 1107 aa19.92■□□□□ 0.78
TRAPPC12-203ENST00000411973 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
TRAPPC12-203ENST00000411973 VAMP4O75379 141 aa19.91■□□□□ 0.78
TRAPPC12-203ENST00000411973 FKBP8Q14318 412 aa19.91■□□□□ 0.78
TRAPPC12-203ENST00000411973 CCDC30Q5VVM6 783 aa19.91■□□□□ 0.78
TRAPPC12-203ENST00000411973 ZBED9Q6R2W3 1325 aa19.91■□□□□ 0.78
TRAPPC12-203ENST00000411973 ANXA1P04083 346 aa19.9■□□□□ 0.78
TRAPPC12-203ENST00000411973 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
TRAPPC12-203ENST00000411973 ARXQ96QS3 562 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms