RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 KIF7Q2M1P5 1343 aa22.61■■□□□ 1.21
MRPL55-220ENST00000411464 ZBTB1Q9Y2K1 713 aa22.61■■□□□ 1.21
MRPL55-220ENST00000411464 CC2D1BQ5T0F9 858 aaKnown RBP22.6■■□□□ 1.21
MRPL55-220ENST00000411464 COL15A1P39059 1388 aa22.6■■□□□ 1.21
MRPL55-220ENST00000411464 SERPINB2P05120 415 aa22.59■■□□□ 1.21
MRPL55-220ENST00000411464 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
MRPL55-220ENST00000411464 FSTL1Q12841 308 aa22.59■■□□□ 1.21
MRPL55-220ENST00000411464 TTC5Q8N0Z6 440 aa22.59■■□□□ 1.21
MRPL55-220ENST00000411464 RRAGCQ9HB90 399 aa22.59■■□□□ 1.21
MRPL55-220ENST00000411464 TJP1Q07157 1748 aa22.58■■□□□ 1.21
MRPL55-220ENST00000411464 STARD3NLO95772 234 aa22.58■■□□□ 1.21
MRPL55-220ENST00000411464 PER1O15534 1290 aaPredicted RBP22.57■■□□□ 1.2
MRPL55-220ENST00000411464 KCPQ6ZWJ8 1503 aa22.57■■□□□ 1.2
MRPL55-220ENST00000411464 TTLL6Q8N841 843 aa22.56■■□□□ 1.2
MRPL55-220ENST00000411464 BCL2L12Q9HB09 334 aa22.56■■□□□ 1.2
MRPL55-220ENST00000411464 SCN11AQ9UI33 1791 aa22.55■■□□□ 1.2
MRPL55-220ENST00000411464 MRC1P22897 1456 aa22.55■■□□□ 1.2
MRPL55-220ENST00000411464 A0A087WZG4 1122 aa22.55■■□□□ 1.2
MRPL55-220ENST00000411464 H0YIN7 160 aa22.55■■□□□ 1.2
MRPL55-220ENST00000411464 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
MRPL55-220ENST00000411464 U2SURPO15042 1029 aaKnown RBP22.54■■□□□ 1.2
MRPL55-220ENST00000411464 LMNB1P20700 586 aa22.54■■□□□ 1.2
MRPL55-220ENST00000411464 RASSF7Q02833 373 aa22.54■■□□□ 1.2
MRPL55-220ENST00000411464 TEFQ10587 303 aa22.54■■□□□ 1.2
MRPL55-220ENST00000411464 BICDL1Q6ZP65 573 aa22.54■■□□□ 1.2
MRPL55-220ENST00000411464 ZC3H4Q9UPT8 1303 aaKnown RBP22.54■■□□□ 1.2
MRPL55-220ENST00000411464 BRCA1P38398 1863 aaKnown RBP22.54■■□□□ 1.2
MRPL55-220ENST00000411464 EIF5P55010 431 aaKnown RBP22.53■■□□□ 1.2
MRPL55-220ENST00000411464 TEX13AQ9BXU3 409 aaPredicted RBP22.53■■□□□ 1.2
MRPL55-220ENST00000411464 GNAT3A8MTJ3 354 aa22.52■■□□□ 1.2
MRPL55-220ENST00000411464 CNGB1Q14028 1251 aaPredicted RBP22.52■■□□□ 1.2
MRPL55-220ENST00000411464 GAS2L2Q8NHY3 880 aa22.52■■□□□ 1.2
MRPL55-220ENST00000411464 ARFGEF1Q9Y6D6 1849 aa22.52■■□□□ 1.2
MRPL55-220ENST00000411464 HTRA3P83110 453 aa22.51■■□□□ 1.19
MRPL55-220ENST00000411464 SMC1BQ8NDV3 1235 aa22.51■■□□□ 1.19
MRPL55-220ENST00000411464 KLRG1Q96E93 195 aa22.51■■□□□ 1.19
MRPL55-220ENST00000411464 ZNF496Q96IT1 587 aaPredicted RBP22.51■■□□□ 1.19
MRPL55-220ENST00000411464 ADAMTS7Q9UKP4 1686 aa22.51■■□□□ 1.19
MRPL55-220ENST00000411464 ZNF790Q6PG37 636 aa22.5■■□□□ 1.19
MRPL55-220ENST00000411464 NPM2Q86SE8 214 aaKnown RBP22.5■■□□□ 1.19
MRPL55-220ENST00000411464 IL17REQ8NFR9 667 aa22.5■■□□□ 1.19
MRPL55-220ENST00000411464 ZNF330Q9Y3S2 320 aaPredicted RBP22.5■■□□□ 1.19
MRPL55-220ENST00000411464 GLTPD2A6NH11 291 aa22.49■■□□□ 1.19
MRPL55-220ENST00000411464 VEGFAP15692 232 aaPredicted RBP22.49■■□□□ 1.19
MRPL55-220ENST00000411464 TBC1D9BQ66K14 1250 aa22.48■■□□□ 1.19
MRPL55-220ENST00000411464 PDZRN3Q9UPQ7 1066 aa22.48■■□□□ 1.19
MRPL55-220ENST00000411464 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
MRPL55-220ENST00000411464 PDE6BP35913 854 aa22.47■■□□□ 1.19
MRPL55-220ENST00000411464 ZNF622Q969S3 477 aaKnown RBP eCLIP22.47■■□□□ 1.19
MRPL55-220ENST00000411464 BRIP1Q9BX63 1249 aa22.47■■□□□ 1.19
MRPL55-220ENST00000411464 HEG1Q9ULI3 1381 aa22.47■■□□□ 1.19
MRPL55-220ENST00000411464 IL6STP40189 918 aaPredicted RBP22.46■■□□□ 1.19
MRPL55-220ENST00000411464 PRELPP51888 382 aa22.46■■□□□ 1.19
MRPL55-220ENST00000411464 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
MRPL55-220ENST00000411464 NFKBIEO00221 500 aa22.45■■□□□ 1.18
MRPL55-220ENST00000411464 NPHP1O15259 732 aa22.45■■□□□ 1.18
MRPL55-220ENST00000411464 JMYQ8N9B5 988 aa22.45■■□□□ 1.18
MRPL55-220ENST00000411464 CARMIL3Q8ND23 1372 aa22.45■■□□□ 1.18
MRPL55-220ENST00000411464 DPY19L2Q6NUT2 758 aa22.44■■□□□ 1.18
MRPL55-220ENST00000411464 NPC1L1Q9UHC9 1359 aa22.44■■□□□ 1.18
MRPL55-220ENST00000411464 C21orf2O43822 256 aa22.43■■□□□ 1.18
MRPL55-220ENST00000411464 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
MRPL55-220ENST00000411464 ZNF219Q9P2Y4 722 aaPredicted RBP22.43■■□□□ 1.18
MRPL55-220ENST00000411464 BTBD11A6QL63 1104 aa22.42■■□□□ 1.18
MRPL55-220ENST00000411464 A1BGP04217 495 aa22.42■■□□□ 1.18
MRPL55-220ENST00000411464 PRR5LQ6MZQ0 368 aa22.42■■□□□ 1.18
MRPL55-220ENST00000411464 CCDC24Q8N4L8 307 aa22.42■■□□□ 1.18
MRPL55-220ENST00000411464 CFAP53Q96M91 514 aa22.42■■□□□ 1.18
MRPL55-220ENST00000411464 CNBD1Q8NA66 436 aa22.41■■□□□ 1.18
MRPL55-220ENST00000411464 NRXN2Q9P2S2 1712 aa22.4■■□□□ 1.18
MRPL55-220ENST00000411464 ERFEQ4G0M1 354 aa22.4■■□□□ 1.18
MRPL55-220ENST00000411464 PHACTR3Q96KR7 559 aa22.4■■□□□ 1.18
MRPL55-220ENST00000411464 WDR90Q96KV7 1748 aa22.4■■□□□ 1.18
MRPL55-220ENST00000411464 CAMTA2O94983 1202 aa22.39■■□□□ 1.17
MRPL55-220ENST00000411464 PRKAR2BP31323 418 aa22.39■■□□□ 1.17
MRPL55-220ENST00000411464 COL3A1P02461 1466 aaPredicted RBP22.39■■□□□ 1.17
MRPL55-220ENST00000411464 AFDNP55196 1824 aaKnown RBP22.38■■□□□ 1.17
MRPL55-220ENST00000411464 KCNQ3O43525 872 aa22.38■■□□□ 1.17
MRPL55-220ENST00000411464 ST5P78524 1137 aa22.38■■□□□ 1.17
MRPL55-220ENST00000411464 DZIP3Q86Y13 1208 aaKnown RBP22.38■■□□□ 1.17
MRPL55-220ENST00000411464 CNKSR1Q969H4 720 aa22.38■■□□□ 1.17
MRPL55-220ENST00000411464 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
MRPL55-220ENST00000411464 TNRC6CQ9HCJ0 1690 aaKnown RBP22.38■■□□□ 1.17
MRPL55-220ENST00000411464 CEMIPQ8WUJ3 1361 aa22.38■■□□□ 1.17
MRPL55-220ENST00000411464 SBF1O95248 1867 aa22.37■■□□□ 1.17
MRPL55-220ENST00000411464 UBR2Q8IWV8 1755 aa22.36■■□□□ 1.17
MRPL55-220ENST00000411464 COL13A1Q5TAT6 717 aaPredicted RBP22.36■■□□□ 1.17
MRPL55-220ENST00000411464 STYK1Q6J9G0 422 aa22.36■■□□□ 1.17
MRPL55-220ENST00000411464 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
MRPL55-220ENST00000411464 RSPH6AQ9H0K4 717 aa22.36■■□□□ 1.17
MRPL55-220ENST00000411464 TAOK3Q9H2K8 898 aa22.36■■□□□ 1.17
MRPL55-220ENST00000411464 POTECB2RU33 542 aa22.35■■□□□ 1.17
MRPL55-220ENST00000411464 USP16Q9Y5T5 823 aa22.35■■□□□ 1.17
MRPL55-220ENST00000411464 SNRPA1P09661 255 aaKnown RBP22.34■■□□□ 1.17
MRPL55-220ENST00000411464 SRGNP10124 158 aa22.34■■□□□ 1.17
MRPL55-220ENST00000411464 SOGA3Q5TF21 947 aa22.34■■□□□ 1.17
MRPL55-220ENST00000411464 MASTLQ96GX5 879 aa22.34■■□□□ 1.17
MRPL55-220ENST00000411464 LTBP3Q9NS15 1303 aa22.33■■□□□ 1.17
MRPL55-220ENST00000411464 U2AF1L5P0DN76 240 aaPredicted RBP22.33■■□□□ 1.17
MRPL55-220ENST00000411464 U2AF1Q01081 240 aaKnown RBP eCLIP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms