RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 KCNC2Q96PR1 638 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 NUDT12Q9BQG2 462 aa1.13□□□□□ -2.23
RNU4-88P-201ENST00000411220 M0R082 166 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 FSHRP23945 695 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 CCDC116Q8IYX3 515 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 DZIP1LQ8IYY4 767 aaKnown RBP1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 ZNF417Q8TAU3 575 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 VOPP1Q96AW1 172 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 ZNF587Q96SQ5 575 aaPredicted RBP1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 STOML1Q9UBI4 398 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 KLF15Q9UIH9 416 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 PALD1Q9ULE6 856 aa1.12□□□□□ -2.23
RNU4-88P-201ENST00000411220 RCCD1A6NED2 376 aa1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 C6P13671 934 aa1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 POU3F3P20264 500 aaPredicted RBP1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 ALAS2P22557 587 aa1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 GDF6Q6KF10 455 aaPredicted RBP1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 ZNF395Q9H8N7 513 aaPredicted RBP1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 CDHR5Q9HBB8 845 aa1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 PGPEP1Q9NXJ5 209 aa1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 TAOK2Q9UL54 1235 aa1.11□□□□□ -2.23
RNU4-88P-201ENST00000411220 NUAK1O60285 661 aa1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 THBS1P07996 1170 aa1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 PDE4AP27815 886 aa1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 HOXA10P31260 410 aaPredicted RBP1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 ACVRL1P37023 503 aa1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 RBM46Q8TBY0 533 aaKnown RBP1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 DBNDD2Q9BQY9 259 aa1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 UNC93B1Q9H1C4 597 aa1.1□□□□□ -2.23
RNU4-88P-201ENST00000411220 STK25O00506 426 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 F11P03951 625 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 INHBEP58166 350 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 MSMPQ1L6U9 139 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 HHIPL2Q6UWX4 724 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 GRASPQ7Z6J2 395 aaPredicted RBP1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 FLCNQ8NFG4 579 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 ABHD17AQ96GS6 310 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 KRTAP2-2Q9BYT5 123 aa1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 PAK6Q9NQU5 681 aaPredicted RBP1.09□□□□□ -2.23
RNU4-88P-201ENST00000411220 ELOA3CA0A087WX78 387 aaPredicted RBP1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 ELOA3DA6NLF2 546 aaPredicted RBP1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 JUNDP17535 347 aa1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 IL12RB1P42701 662 aa1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 ELOA3BQ3SY89 546 aa1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 ELOA3Q8NG57 546 aa1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 KRTAP1-5Q9BYS1 174 aa1.08□□□□□ -2.24
RNU4-88P-201ENST00000411220 TACR2P21452 398 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 CTGFP29279 349 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 UBAP2LQ14157 1087 aaKnown RBP1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 ZNF792Q3KQV3 632 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 TIGD5Q53EQ6 642 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 CRTC2Q53ET0 693 aaPredicted RBP1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 RNF43Q68DV7 783 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 GLIS3Q8NEA6 775 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 SPOCK2Q92563 424 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 DDX27Q96GQ7 796 aaKnown RBP1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 CD320Q9NPF0 282 aa1.07□□□□□ -2.24
RNU4-88P-201ENST00000411220 GRIPAP1Q4V328 841 aa1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 PPP1R26Q5T8A7 1209 aaPredicted RBP1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 C8orf86Q6ZUL3 223 aa1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 KRTAP5-5Q701N2 237 aaPredicted RBP1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 FMR1NBQ8N0W7 255 aaPredicted RBP1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 UNKLQ9H9P5 680 aaKnown RBP1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 PIM2Q9P1W9 311 aa1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 NCKAP5LQ9HCH0 1330 aa1.06□□□□□ -2.24
RNU4-88P-201ENST00000411220 HRCP23327 699 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 PRIM1P49642 420 aaKnown RBP1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 RNF144AP50876 292 aaPredicted RBP1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 KRTAP10-12P60413 245 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 PLP2Q04941 152 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 USP51Q70EK9 711 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 MARCH10Q8NA82 808 aaPredicted RBP1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 SHKBP1Q8TBC3 707 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 IRF2BPLQ9H1B7 796 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 PCED1AQ9H1Q7 454 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
RNU4-88P-201ENST00000411220 ERVV-2B6SEH9 535 aa1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 ALBP02768 609 aa1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 FUT4P22083 530 aa1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 PCBP4P57723 403 aaKnown RBP1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 LBRQ14739 615 aaKnown RBP1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 ZIC5Q96T25 663 aa1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 XYLT2Q9H1B5 865 aa1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 NDFIP2Q9NV92 336 aa1.04□□□□□ -2.24
RNU4-88P-201ENST00000411220 TCAF2A6NFQ2 919 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 BNIP3LO60238 219 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 TMEM253P0C7T8 217 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 CCNYL3P0C7X3 344 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 PTGIRP43119 386 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 NANOS3P60323 173 aaKnown RBP1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 PLCL1Q15111 1095 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 MAP4K5Q9Y4K4 846 aa1.03□□□□□ -2.24
RNU4-88P-201ENST00000411220 ADAMTS20P59510 1910 aa1.03□□□□□ -2.25
RNU4-88P-201ENST00000411220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 ZNF503-AS2A6NEH8 195 aa1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 DHX15O43143 795 aaKnown RBP1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 LINC00310P59036 64 aa1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 SWI5Q1ZZU3 235 aa1.02□□□□□ -2.25
RNU4-88P-201ENST00000411220 LCE3AQ5TA76 89 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms