RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 CNTNAP4Q9C0A0 1308 aa26.61■■□□□ 1.85
C4orf48-202ENST00000409860 EIF2S2P20042 333 aaKnown RBP26.6■■□□□ 1.85
C4orf48-202ENST00000409860 CRKLP46109 303 aaKnown RBP26.6■■□□□ 1.85
C4orf48-202ENST00000409860 HDGFL1Q5TGJ6 251 aa26.6■■□□□ 1.85
C4orf48-202ENST00000409860 C5P01031 1676 aa26.6■■□□□ 1.85
C4orf48-202ENST00000409860 RC3H1Q5TC82 1133 aaKnown RBP26.59■■□□□ 1.85
C4orf48-202ENST00000409860 AK7Q96M32 723 aa26.59■■□□□ 1.85
C4orf48-202ENST00000409860 CCDC87Q9NVE4 849 aa26.59■■□□□ 1.85
C4orf48-202ENST00000409860 NBPF14Q5TI25 921 aa26.57■■□□□ 1.84
C4orf48-202ENST00000409860 STK32BQ9NY57 414 aa26.57■■□□□ 1.84
C4orf48-202ENST00000409860 ERBB4Q15303 1308 aa26.57■■□□□ 1.84
C4orf48-202ENST00000409860 LAMB4A4D0S4 1761 aa26.56■■□□□ 1.84
C4orf48-202ENST00000409860 VAMP4O75379 141 aa26.56■■□□□ 1.84
C4orf48-202ENST00000409860 CT47B1P0C2W7 299 aaPredicted RBP26.56■■□□□ 1.84
C4orf48-202ENST00000409860 C4BP0C0L5 1744 aa26.56■■□□□ 1.84
C4orf48-202ENST00000409860 COL5A3P25940 1745 aaPredicted RBP26.56■■□□□ 1.84
C4orf48-202ENST00000409860 NUP188Q5SRE5 1749 aa26.56■■□□□ 1.84
C4orf48-202ENST00000409860 A1BGP04217 495 aa26.55■■□□□ 1.84
C4orf48-202ENST00000409860 CCDC30Q5VVM6 783 aa26.55■■□□□ 1.84
C4orf48-202ENST00000409860 INTS5Q6P9B9 1019 aaKnown RBP26.55■■□□□ 1.84
C4orf48-202ENST00000409860 NECTIN2Q92692 538 aa26.55■■□□□ 1.84
C4orf48-202ENST00000409860 AKT1S1Q96B36 256 aa26.55■■□□□ 1.84
C4orf48-202ENST00000409860 ZBTB1Q9Y2K1 713 aa26.55■■□□□ 1.84
C4orf48-202ENST00000409860 TAF1LQ8IZX4 1826 aa26.54■■□□□ 1.84
C4orf48-202ENST00000409860 GNPATO15228 680 aa26.54■■□□□ 1.84
C4orf48-202ENST00000409860 ZNF827Q17R98 1081 aa26.54■■□□□ 1.84
C4orf48-202ENST00000409860 CANXP27824 592 aaKnown RBP26.53■■□□□ 1.84
C4orf48-202ENST00000409860 ANO8Q9HCE9 1232 aaPredicted RBP26.53■■□□□ 1.84
C4orf48-202ENST00000409860 ZNF428Q96B54 188 aa26.52■■□□□ 1.84
C4orf48-202ENST00000409860 TFCP2L1Q9NZI6 479 aa26.52■■□□□ 1.84
C4orf48-202ENST00000409860 RTCBQ9Y3I0 505 aaKnown RBP26.52■■□□□ 1.84
C4orf48-202ENST00000409860 RPS6KA4O75676 772 aa26.51■■□□□ 1.83
C4orf48-202ENST00000409860 SLC15A2Q16348 729 aa26.51■■□□□ 1.83
C4orf48-202ENST00000409860 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
C4orf48-202ENST00000409860 STK31Q9BXU1 1019 aa26.51■■□□□ 1.83
C4orf48-202ENST00000409860 DBF4Q9UBU7 674 aaPredicted RBP26.51■■□□□ 1.83
C4orf48-202ENST00000409860 IL6STP40189 918 aaPredicted RBP26.5■■□□□ 1.83
C4orf48-202ENST00000409860 CHPF2Q9P2E5 772 aa26.5■■□□□ 1.83
C4orf48-202ENST00000409860 NBPF26B4DH59 902 aa26.49■■□□□ 1.83
C4orf48-202ENST00000409860 PIP4K2AP48426 406 aaPredicted RBP26.49■■□□□ 1.83
C4orf48-202ENST00000409860 NBPF10Q6P3W6 841 aaKnown RBP26.49■■□□□ 1.83
C4orf48-202ENST00000409860 NBPF15Q8N660 670 aa26.49■■□□□ 1.83
C4orf48-202ENST00000409860 DDX21Q9NR30 783 aaKnown RBP eCLIP26.49■■□□□ 1.83
C4orf48-202ENST00000409860 ZNF330Q9Y3S2 320 aaPredicted RBP26.49■■□□□ 1.83
C4orf48-202ENST00000409860 MYL6BP14649 208 aa26.48■■□□□ 1.83
C4orf48-202ENST00000409860 SSFA2P28290 1259 aa26.48■■□□□ 1.83
C4orf48-202ENST00000409860 ADRA2BP18089 450 aa26.47■■□□□ 1.83
C4orf48-202ENST00000409860 PDIA6Q15084 440 aa26.47■■□□□ 1.83
C4orf48-202ENST00000409860 TCERG1O14776 1098 aaKnown RBP26.46■■□□□ 1.83
C4orf48-202ENST00000409860 PHF14O94880 888 aa26.46■■□□□ 1.83
C4orf48-202ENST00000409860 EIF5P55010 431 aaKnown RBP26.46■■□□□ 1.83
C4orf48-202ENST00000409860 PROSER3Q2NL68 480 aa26.46■■□□□ 1.83
C4orf48-202ENST00000409860 FLAD1Q8NFF5 587 aa26.46■■□□□ 1.83
C4orf48-202ENST00000409860 HYPKQ9NX55 129 aa26.46■■□□□ 1.83
C4orf48-202ENST00000409860 COL15A1P39059 1388 aa26.46■■□□□ 1.83
C4orf48-202ENST00000409860 A0A087WZG4 1122 aa26.45■■□□□ 1.82
C4orf48-202ENST00000409860 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.45■■□□□ 1.82
C4orf48-202ENST00000409860 ANXA1P04083 346 aa26.45■■□□□ 1.82
C4orf48-202ENST00000409860 TRAPPC3LQ5T215 181 aa26.45■■□□□ 1.82
C4orf48-202ENST00000409860 MYH14Q7Z406 1995 aaKnown RBP26.45■■□□□ 1.82
C4orf48-202ENST00000409860 ALDH1L2Q3SY69 923 aa26.44■■□□□ 1.82
C4orf48-202ENST00000409860 SLC4A2P04920 1241 aa26.43■■□□□ 1.82
C4orf48-202ENST00000409860 AMIGO3Q86WK7 504 aa26.43■■□□□ 1.82
C4orf48-202ENST00000409860 SSH1Q8WYL5 1049 aa26.42■■□□□ 1.82
C4orf48-202ENST00000409860 PNPLA7Q6ZV29 1317 aa26.41■■□□□ 1.82
C4orf48-202ENST00000409860 RARSP54136 660 aaKnown RBP26.41■■□□□ 1.82
C4orf48-202ENST00000409860 SMIM5Q71RC9 77 aa26.41■■□□□ 1.82
C4orf48-202ENST00000409860 LRP10Q7Z4F1 713 aa26.41■■□□□ 1.82
C4orf48-202ENST00000409860 SMC4Q9NTJ3 1288 aa26.41■■□□□ 1.82
C4orf48-202ENST00000409860 RFC4P35249 363 aa26.4■■□□□ 1.82
C4orf48-202ENST00000409860 XAGE3Q8WTP9 111 aa26.4■■□□□ 1.82
C4orf48-202ENST00000409860 ARHGEF1Q92888 912 aaKnown RBP26.4■■□□□ 1.82
C4orf48-202ENST00000409860 ARXQ96QS3 562 aa26.4■■□□□ 1.82
C4orf48-202ENST00000409860 UBR3Q6ZT12 1888 aa26.4■■□□□ 1.82
C4orf48-202ENST00000409860 MSH5O43196 834 aa26.39■■□□□ 1.82
C4orf48-202ENST00000409860 R3HDM1Q15032 1099 aaKnown RBP26.39■■□□□ 1.82
C4orf48-202ENST00000409860 KIF6Q6ZMV9 814 aa26.39■■□□□ 1.82
C4orf48-202ENST00000409860 DZIP3Q86Y13 1208 aaKnown RBP26.39■■□□□ 1.82
C4orf48-202ENST00000409860 BCL2L13Q9BXK5 485 aa26.39■■□□□ 1.82
C4orf48-202ENST00000409860 AIMP1Q12904 312 aaKnown RBP26.38■■□□□ 1.81
C4orf48-202ENST00000409860 COPS6Q7L5N1 327 aa26.38■■□□□ 1.81
C4orf48-202ENST00000409860 COL23A1Q86Y22 540 aaPredicted RBP26.38■■□□□ 1.81
C4orf48-202ENST00000409860 MRPL50Q8N5N7 158 aaKnown RBP26.38■■□□□ 1.81
C4orf48-202ENST00000409860 ZPR1O75312 459 aa26.37■■□□□ 1.81
C4orf48-202ENST00000409860 PHAXQ9H814 394 aaKnown RBP26.37■■□□□ 1.81
C4orf48-202ENST00000409860 TBC1D2BQ9UPU7 963 aa26.37■■□□□ 1.81
C4orf48-202ENST00000409860 FLIIQ13045 1269 aa26.36■■□□□ 1.81
C4orf48-202ENST00000409860 NARFQ9UHQ1 456 aa26.36■■□□□ 1.81
C4orf48-202ENST00000409860 DDX58O95786 925 aaKnown RBP26.35■■□□□ 1.81
C4orf48-202ENST00000409860 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
C4orf48-202ENST00000409860 RCAN3Q9UKA8 241 aa26.35■■□□□ 1.81
C4orf48-202ENST00000409860 USP42Q9H9J4 1324 aaKnown RBP26.35■■□□□ 1.81
C4orf48-202ENST00000409860 QSER1Q2KHR3 1735 aa26.34■■□□□ 1.81
C4orf48-202ENST00000409860 G2E3Q7L622 706 aa26.34■■□□□ 1.81
C4orf48-202ENST00000409860 TUBGCP6Q96RT7 1819 aa26.34■■□□□ 1.81
C4orf48-202ENST00000409860 MAP3K15Q6ZN16 1313 aa26.34■■□□□ 1.81
C4orf48-202ENST00000409860 PSDA5PKW4 1024 aaPredicted RBP26.33■■□□□ 1.81
C4orf48-202ENST00000409860 BRPF1P55201 1214 aaPredicted RBP26.33■■□□□ 1.81
C4orf48-202ENST00000409860 SRP68Q9UHB9 627 aaKnown RBP26.33■■□□□ 1.81
C4orf48-202ENST00000409860 KIF16BQ96L93 1317 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms