RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 TM4SF1P30408 202 aa12.73□□□□□ -0.37
VAMP8-202ENST00000409760 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
VAMP8-202ENST00000409760 GPBP1L1Q9HC44 474 aaPredicted RBP12.73□□□□□ -0.37
VAMP8-202ENST00000409760 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
VAMP8-202ENST00000409760 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
VAMP8-202ENST00000409760 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
VAMP8-202ENST00000409760 KIF3CO14782 793 aa12.72□□□□□ -0.37
VAMP8-202ENST00000409760 PRKAR2BP31323 418 aa12.72□□□□□ -0.37
VAMP8-202ENST00000409760 ZNF526Q8TF50 670 aaPredicted RBP12.72□□□□□ -0.37
VAMP8-202ENST00000409760 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
VAMP8-202ENST00000409760 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
VAMP8-202ENST00000409760 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
VAMP8-202ENST00000409760 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.37
VAMP8-202ENST00000409760 HTATSF1O43719 755 aaKnown RBP12.71□□□□□ -0.37
VAMP8-202ENST00000409760 DIEXFQ68CQ4 756 aaKnown RBP12.71□□□□□ -0.37
VAMP8-202ENST00000409760 BCL2L12Q9HB09 334 aa12.71□□□□□ -0.37
VAMP8-202ENST00000409760 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
VAMP8-202ENST00000409760 SIPA1L3O60292 1781 aaPredicted RBP12.71□□□□□ -0.38
VAMP8-202ENST00000409760 USPL1Q5W0Q7 1092 aa12.7□□□□□ -0.38
VAMP8-202ENST00000409760 RTF1Q92541 710 aaKnown RBP12.7□□□□□ -0.38
VAMP8-202ENST00000409760 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
VAMP8-202ENST00000409760 COL15A1P39059 1388 aa12.69□□□□□ -0.38
VAMP8-202ENST00000409760 TEFQ10587 303 aa12.69□□□□□ -0.38
VAMP8-202ENST00000409760 VSIG10Q8N0Z9 540 aa12.69□□□□□ -0.38
VAMP8-202ENST00000409760 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
VAMP8-202ENST00000409760 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
VAMP8-202ENST00000409760 CHRNA5P30532 468 aa12.68□□□□□ -0.38
VAMP8-202ENST00000409760 NFIXQ14938 502 aa12.68□□□□□ -0.38
VAMP8-202ENST00000409760 PHACTR3Q96KR7 559 aa12.68□□□□□ -0.38
VAMP8-202ENST00000409760 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
VAMP8-202ENST00000409760 CEMIPQ8WUJ3 1361 aa12.68□□□□□ -0.38
VAMP8-202ENST00000409760 MAPK8IP3Q9UPT6 1336 aa12.67□□□□□ -0.38
VAMP8-202ENST00000409760 HSPA6P17066 643 aa12.67□□□□□ -0.38
VAMP8-202ENST00000409760 ARHGAP27Q6ZUM4 889 aa12.67□□□□□ -0.38
VAMP8-202ENST00000409760 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
VAMP8-202ENST00000409760 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
VAMP8-202ENST00000409760 WDR43Q15061 677 aaKnown RBP eCLIP12.66□□□□□ -0.38
VAMP8-202ENST00000409760 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
VAMP8-202ENST00000409760 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
VAMP8-202ENST00000409760 SCN7AQ01118 1682 aa12.66□□□□□ -0.38
VAMP8-202ENST00000409760 CARMIL3Q8ND23 1372 aa12.66□□□□□ -0.38
VAMP8-202ENST00000409760 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
VAMP8-202ENST00000409760 ZPR1O75312 459 aa12.65□□□□□ -0.38
VAMP8-202ENST00000409760 DALRD3Q5D0E6 543 aaKnown RBP12.65□□□□□ -0.38
VAMP8-202ENST00000409760 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
VAMP8-202ENST00000409760 NMRK2Q9NPI5 230 aa12.65□□□□□ -0.38
VAMP8-202ENST00000409760 HEG1Q9ULI3 1381 aa12.65□□□□□ -0.38
VAMP8-202ENST00000409760 PRELPP51888 382 aa12.64□□□□□ -0.39
VAMP8-202ENST00000409760 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
VAMP8-202ENST00000409760 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
VAMP8-202ENST00000409760 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
VAMP8-202ENST00000409760 ANP32CO43423 234 aa12.63□□□□□ -0.39
VAMP8-202ENST00000409760 KCNQ3O43525 872 aa12.63□□□□□ -0.39
VAMP8-202ENST00000409760 SERPINB2P05120 415 aa12.63□□□□□ -0.39
VAMP8-202ENST00000409760 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
VAMP8-202ENST00000409760 NFE2L2Q16236 605 aa12.63□□□□□ -0.39
VAMP8-202ENST00000409760 PNISRQ8TF01 805 aaKnown RBP12.63□□□□□ -0.39
VAMP8-202ENST00000409760 SBF1O95248 1867 aa12.62□□□□□ -0.39
VAMP8-202ENST00000409760 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
VAMP8-202ENST00000409760 BTBD11A6QL63 1104 aa12.62□□□□□ -0.39
VAMP8-202ENST00000409760 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
VAMP8-202ENST00000409760 TOMM70O94826 608 aa12.61□□□□□ -0.39
VAMP8-202ENST00000409760 STARD3NLO95772 234 aa12.61□□□□□ -0.39
VAMP8-202ENST00000409760 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
VAMP8-202ENST00000409760 COL11A2P13942 1736 aaPredicted RBP12.6□□□□□ -0.39
VAMP8-202ENST00000409760 RASSF7Q02833 373 aa12.6□□□□□ -0.39
VAMP8-202ENST00000409760 TAF7Q15545 349 aaPredicted RBP12.6□□□□□ -0.39
VAMP8-202ENST00000409760 TBC1D9BQ66K14 1250 aa12.6□□□□□ -0.39
VAMP8-202ENST00000409760 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
VAMP8-202ENST00000409760 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
VAMP8-202ENST00000409760 BCORQ6W2J9 1755 aa12.6□□□□□ -0.39
VAMP8-202ENST00000409760 A0A087WZG4 1122 aa12.59□□□□□ -0.39
VAMP8-202ENST00000409760 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
VAMP8-202ENST00000409760 A1BGP04217 495 aa12.59□□□□□ -0.39
VAMP8-202ENST00000409760 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
VAMP8-202ENST00000409760 MCM10Q7L590 875 aa12.59□□□□□ -0.39
VAMP8-202ENST00000409760 MIER1Q8N108 512 aa12.59□□□□□ -0.39
VAMP8-202ENST00000409760 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
VAMP8-202ENST00000409760 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 NFKBIEO00221 500 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 C2CD5Q86YS7 1000 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 DNAJC5GQ8N7S2 189 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
VAMP8-202ENST00000409760 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
VAMP8-202ENST00000409760 TNRC6CQ9HCJ0 1690 aaKnown RBP12.57□□□□□ -0.4
VAMP8-202ENST00000409760 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
VAMP8-202ENST00000409760 RIPK4P57078 832 aa12.57□□□□□ -0.4
VAMP8-202ENST00000409760 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
VAMP8-202ENST00000409760 ADAMTS8Q9UP79 889 aa12.57□□□□□ -0.4
VAMP8-202ENST00000409760 USP16Q9Y5T5 823 aa12.57□□□□□ -0.4
VAMP8-202ENST00000409760 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
VAMP8-202ENST00000409760 APLP1P51693 650 aa12.56□□□□□ -0.4
VAMP8-202ENST00000409760 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
VAMP8-202ENST00000409760 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
VAMP8-202ENST00000409760 BRIP1Q9BX63 1249 aa12.56□□□□□ -0.4
VAMP8-202ENST00000409760 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
VAMP8-202ENST00000409760 ZC3H4Q9UPT8 1303 aaKnown RBP12.56□□□□□ -0.4
VAMP8-202ENST00000409760 WDR90Q96KV7 1748 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms