RNA–Protein interactions for RNA: ENST00000409556.5

KDM3A-203, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KDM3A, Length 4,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-203ENST00000409556 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.92■□□□□ 0.46
KDM3A-203ENST00000409556 ANKRD20A12PQ8NF67 263 aa17.92■□□□□ 0.46
KDM3A-203ENST00000409556 SETDB2Q96T68 719 aa17.92■□□□□ 0.46
KDM3A-203ENST00000409556 ZNF219Q9P2Y4 722 aaPredicted RBP17.91■□□□□ 0.46
KDM3A-203ENST00000409556 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
KDM3A-203ENST00000409556 TPM1P09493 284 aa17.91■□□□□ 0.46
KDM3A-203ENST00000409556 GLIPR1L2Q4G1C9 344 aa17.91■□□□□ 0.46
KDM3A-203ENST00000409556 PER1O15534 1290 aaPredicted RBP17.91■□□□□ 0.46
KDM3A-203ENST00000409556 DNAJC5Q9H3Z4 198 aa17.91■□□□□ 0.46
KDM3A-203ENST00000409556 KAT6BQ8WYB5 2073 aa17.91■□□□□ 0.46
KDM3A-203ENST00000409556 ATP2B1P20020 1258 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 IMMTQ16891 758 aaKnown RBP17.9■□□□□ 0.46
KDM3A-203ENST00000409556 CCDC152Q4G0S7 254 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 ZNF287Q9HBT7 754 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 GCC2Q8IWJ2 1684 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 C8orf58Q8NAV2 365 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 NUP133Q8WUM0 1156 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
KDM3A-203ENST00000409556 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.46
KDM3A-203ENST00000409556 USP5P45974 858 aa17.89■□□□□ 0.46
KDM3A-203ENST00000409556 KSR2Q6VAB6 950 aa17.89■□□□□ 0.46
KDM3A-203ENST00000409556 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.461e-7■□□□□ 8.8
KDM3A-203ENST00000409556 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.46
KDM3A-203ENST00000409556 NPC1L1Q9UHC9 1359 aa17.89■□□□□ 0.45
KDM3A-203ENST00000409556 ALDH1L1O75891 902 aa17.89■□□□□ 0.45
KDM3A-203ENST00000409556 TPM3P06753 285 aa17.89■□□□□ 0.45
KDM3A-203ENST00000409556 DDX17Q92841 729 aaKnown RBP17.89■□□□□ 0.45
KDM3A-203ENST00000409556 CEP89Q96ST8 783 aa17.89■□□□□ 0.45
KDM3A-203ENST00000409556 SLF2Q8IX21 1173 aa17.89■□□□□ 0.45
KDM3A-203ENST00000409556 UGGT1Q9NYU2 1555 aa17.88■□□□□ 0.45
KDM3A-203ENST00000409556 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
KDM3A-203ENST00000409556 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
KDM3A-203ENST00000409556 JAKMIP1Q96N16 626 aaKnown RBP17.88■□□□□ 0.45
KDM3A-203ENST00000409556 RSPH6AQ9H0K4 717 aa17.88■□□□□ 0.45
KDM3A-203ENST00000409556 NLRP3Q96P20 1036 aa17.87■□□□□ 0.45
KDM3A-203ENST00000409556 STK3Q13188 491 aa17.87■□□□□ 0.45
KDM3A-203ENST00000409556 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
KDM3A-203ENST00000409556 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
KDM3A-203ENST00000409556 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
KDM3A-203ENST00000409556 NLRP1Q9C000 1473 aa17.87■□□□□ 0.45
KDM3A-203ENST00000409556 POLR3DP05423 398 aaPredicted RBP17.86■□□□□ 0.45
KDM3A-203ENST00000409556 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 JARID2Q92833 1246 aaPredicted RBP17.86■□□□□ 0.45
KDM3A-203ENST00000409556 ECHDC1Q9NTX5 307 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 PLEKHH1Q9ULM0 1364 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 TFCP2L1Q9NZI6 479 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 CDKL5O76039 1030 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 SASS6Q6UVJ0 657 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 NAPBQ9H115 298 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 CRACR2BQ8N4Y2 399 aaPredicted RBP17.86■□□□□ 0.45
KDM3A-203ENST00000409556 RTN4Q9NQC3 1192 aaKnown RBP17.86■□□□□ 0.45
KDM3A-203ENST00000409556 PDRG1Q9NUG6 133 aa17.86■□□□□ 0.45
KDM3A-203ENST00000409556 IL13P35225 146 aa17.85■□□□□ 0.45
KDM3A-203ENST00000409556 NBPF14Q5TI25 921 aa17.85■□□□□ 0.45
KDM3A-203ENST00000409556 BACH2Q9BYV9 841 aa17.85■□□□□ 0.45
KDM3A-203ENST00000409556 GRM8O00222 908 aa17.85■□□□□ 0.45
KDM3A-203ENST00000409556 ANKRD18AQ8IVF6 992 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
KDM3A-203ENST00000409556 SDF4Q9BRK5 362 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
KDM3A-203ENST00000409556 PCMTD1Q96MG8 357 aaPredicted RBP17.84■□□□□ 0.45
KDM3A-203ENST00000409556 PTPRTO14522 1441 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 ERVK-7P63135 1459 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 LINS1Q8NG48 757 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
KDM3A-203ENST00000409556 NYXQ9GZU5 481 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 METP08581 1390 aa17.84■□□□□ 0.45
KDM3A-203ENST00000409556 LDHCP07864 332 aa17.83■□□□□ 0.45
KDM3A-203ENST00000409556 TTF1Q15361 905 aaPredicted RBP17.83■□□□□ 0.45
KDM3A-203ENST00000409556 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.45
KDM3A-203ENST00000409556 MRPL50Q8N5N7 158 aaKnown RBP17.83■□□□□ 0.45
KDM3A-203ENST00000409556 UTP14AQ9BVJ6 771 aaKnown RBP17.83■□□□□ 0.45
KDM3A-203ENST00000409556 MKNK2Q9HBH9 465 aa17.83■□□□□ 0.45
KDM3A-203ENST00000409556 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.45
KDM3A-203ENST00000409556 TXLNAP40222 546 aa17.83■□□□□ 0.44
KDM3A-203ENST00000409556 MEIS3Q99687 375 aa17.82■□□□□ 0.44
KDM3A-203ENST00000409556 USP21Q9UK80 565 aa17.82■□□□□ 0.44
KDM3A-203ENST00000409556 STK38Q15208 465 aa17.82■□□□□ 0.44
KDM3A-203ENST00000409556 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
KDM3A-203ENST00000409556 JMYQ8N9B5 988 aa17.82■□□□□ 0.44
KDM3A-203ENST00000409556 CDK5RAP3Q96JB5 506 aa17.82■□□□□ 0.44
KDM3A-203ENST00000409556 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
KDM3A-203ENST00000409556 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
KDM3A-203ENST00000409556 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
KDM3A-203ENST00000409556 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
KDM3A-203ENST00000409556 K7ELQ4 463 aaPredicted RBP17.81■□□□□ 0.44
KDM3A-203ENST00000409556 UQCRFS1P1P0C7P4 283 aa17.81■□□□□ 0.44
KDM3A-203ENST00000409556 BABAM1Q9NWV8 329 aa17.81■□□□□ 0.44
KDM3A-203ENST00000409556 VAMP4O75379 141 aa17.8■□□□□ 0.44
KDM3A-203ENST00000409556 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
KDM3A-203ENST00000409556 SPTY2D1Q68D10 685 aaPredicted RBP17.8■□□□□ 0.44
KDM3A-203ENST00000409556 PLXNC1O60486 1568 aa17.8■□□□□ 0.44
KDM3A-203ENST00000409556 ZNF790Q6PG37 636 aa17.8■□□□□ 0.44
KDM3A-203ENST00000409556 GOLIM4O00461 696 aa17.8■□□□□ 0.44
KDM3A-203ENST00000409556 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
KDM3A-203ENST00000409556 SNRKQ9NRH2 765 aa17.79■□□□□ 0.44
KDM3A-203ENST00000409556 CASTP20810 708 aaKnown RBP17.79■□□□□ 0.44
KDM3A-203ENST00000409556 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
KDM3A-203ENST00000409556 IPO7O95373 1038 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms