RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 PIBF1Q8WXW3 757 aa19.53■□□□□ 0.72
PTPRN2-205ENST00000409483 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTPRN2-205ENST00000409483 ZMYM3Q14202 1370 aa19.52■□□□□ 0.72
PTPRN2-205ENST00000409483 IFIT1P09914 478 aaKnown RBP19.52■□□□□ 0.72
PTPRN2-205ENST00000409483 UGGT1Q9NYU2 1555 aa19.52■□□□□ 0.72
PTPRN2-205ENST00000409483 ABCF2Q9UG63 623 aa19.52■□□□□ 0.72
PTPRN2-205ENST00000409483 LIMCH1Q9UPQ0 1083 aa19.52■□□□□ 0.72
PTPRN2-205ENST00000409483 LETM1O95202 739 aaPredicted RBP19.52■□□□□ 0.71
PTPRN2-205ENST00000409483 NECAB1Q8N987 351 aa19.52■□□□□ 0.71
PTPRN2-205ENST00000409483 TSR1Q2NL82 804 aaKnown RBP19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 COPS6Q7L5N1 327 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 RAB11FIP4Q86YS3 637 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 CCDC82Q8N4S0 544 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 XAGE3Q8WTP9 111 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 NUP62CLQ9H1M0 184 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 GOLIM4O00461 696 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 ZGPATQ8N5A5 531 aaKnown RBP19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
PTPRN2-205ENST00000409483 ZNF396Q96N95 335 aaPredicted RBP19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 PIP4K2BP78356 416 aa19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 TPM1P09493 284 aa19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 DDX46Q7L014 1031 aaKnown RBP19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 HOOK1Q9UJC3 728 aaKnown RBP19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 FILIP1Q7Z7B0 1213 aa19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 CKAP2LQ8IYA6 745 aa19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 NAT10Q9H0A0 1025 aaKnown RBP19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 TTC21AQ8NDW8 1320 aa19.5■□□□□ 0.71
PTPRN2-205ENST00000409483 ADAMTS2O95450 1211 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 LRRC2Q9BYS8 371 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 TTLL5Q6EMB2 1281 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 ESYT1Q9BSJ8 1104 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 KAT6BQ8WYB5 2073 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 BRPF1P55201 1214 aaPredicted RBP19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 HAND2P61296 217 aa19.49■□□□□ 0.71
PTPRN2-205ENST00000409483 KRT32Q14532 448 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 ATP10AO60312 1499 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 TDO2P48775 406 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 OLFM4Q6UX06 510 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 FLT4P35916 1363 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
PTPRN2-205ENST00000409483 XRCC6P12956 609 aaKnown RBP eCLIP19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 MSH6P52701 1360 aa19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 GJB2P29033 226 aa19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 USP25Q9UHP3 1055 aa19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 STARD3NLO95772 234 aa19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 NFATC2IPQ8NCF5 419 aa19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 LRP2BPQ9P2M1 347 aa19.47■□□□□ 0.71
PTPRN2-205ENST00000409483 PLA2R1Q13018 1463 aa19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 SAMD9LQ8IVG5 1584 aa19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 NOC3LQ8WTT2 800 aaKnown RBP19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 EVI5LQ96CN4 794 aa19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 RAI14Q9P0K7 980 aa19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 KDM5CP41229 1560 aa19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 HOXC9P31274 260 aa19.46■□□□□ 0.71
PTPRN2-205ENST00000409483 STX6O43752 255 aa19.45■□□□□ 0.7
PTPRN2-205ENST00000409483 CPA1P15085 419 aa19.45■□□□□ 0.7
PTPRN2-205ENST00000409483 AIDAQ96BJ3 306 aa19.45■□□□□ 0.7
PTPRN2-205ENST00000409483 TRIM34Q9BYJ4 488 aa19.45■□□□□ 0.7
PTPRN2-205ENST00000409483 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
PTPRN2-205ENST00000409483 CCDC69A6NI79 296 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 XBP1P17861 261 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 IFIT5Q13325 482 aaKnown RBP19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 IMMTQ16891 758 aaKnown RBP19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 ZSCAN30Q86W11 494 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 GCP02774 474 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 MAP3K11Q16584 847 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 NACAP1Q9BZK3 213 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 CTNNA3Q9UI47 895 aa19.44■□□□□ 0.7
PTPRN2-205ENST00000409483 ABCA8O94911 1581 aa19.43■□□□□ 0.7
PTPRN2-205ENST00000409483 ANKRD20A12PQ8NF67 263 aa19.43■□□□□ 0.7
PTPRN2-205ENST00000409483 U3KPZ7 1027 aaPredicted RBP19.43■□□□□ 0.7
PTPRN2-205ENST00000409483 GRM8O00222 908 aa19.43■□□□□ 0.7
PTPRN2-205ENST00000409483 CFAP45Q9UL16 551 aa19.43■□□□□ 0.7
PTPRN2-205ENST00000409483 BRMS1Q9HCU9 246 aa19.43■□□□□ 0.7
PTPRN2-205ENST00000409483 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 SNRPA1P09661 255 aaKnown RBP19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 TRIM22Q8IYM9 498 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 MINDY4BA8MYZ0 360 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 LMBR1LQ6UX01 489 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 FAM177A1Q8N128 213 aaPredicted RBP19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 ADGBQ8N7X0 1667 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 KLHL40Q2TBA0 621 aa19.42■□□□□ 0.7
PTPRN2-205ENST00000409483 CHL1O00533 1208 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 ZFYVE9O95405 1425 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 SERPINC1P01008 464 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 KSR2Q6VAB6 950 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 SH2B1Q9NRF2 756 aaPredicted RBP19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 AKAP4Q5JQC9 854 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 CCDC144CPQ8IYA2 1237 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 KLHDC4Q8TBB5 520 aa19.41■□□□□ 0.7
PTPRN2-205ENST00000409483 PNMA6EA0A0J9YXQ4 647 aa19.4■□□□□ 0.7
PTPRN2-205ENST00000409483 IPO7O95373 1038 aaKnown RBP19.4■□□□□ 0.7
PTPRN2-205ENST00000409483 ZSCAN23Q3MJ62 389 aa19.4■□□□□ 0.7
PTPRN2-205ENST00000409483 MNS1Q8NEH6 495 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms