RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 STARD3NLO95772 234 aa19.61■□□□□ 0.73
SNRNP27-202ENST00000409116 CRKLP46109 303 aaKnown RBP19.61■□□□□ 0.73
SNRNP27-202ENST00000409116 EXOSC9Q06265 439 aaKnown RBP19.61■□□□□ 0.73
SNRNP27-202ENST00000409116 DUSP27Q5VZP5 1158 aa19.61■□□□□ 0.73
SNRNP27-202ENST00000409116 TSPYL6Q8N831 410 aa19.61■□□□□ 0.73
SNRNP27-202ENST00000409116 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
SNRNP27-202ENST00000409116 NECTIN2Q92692 538 aa19.6■□□□□ 0.73
SNRNP27-202ENST00000409116 TEX13AQ9BXU3 409 aaPredicted RBP19.6■□□□□ 0.73
SNRNP27-202ENST00000409116 INTS5Q6P9B9 1019 aaKnown RBP19.59■□□□□ 0.73
SNRNP27-202ENST00000409116 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
SNRNP27-202ENST00000409116 AKT1S1Q96B36 256 aa19.59■□□□□ 0.73
SNRNP27-202ENST00000409116 AK7Q96M32 723 aa19.59■□□□□ 0.73
SNRNP27-202ENST00000409116 CNTNAP4Q9C0A0 1308 aa19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 A1BGP04217 495 aa19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 SMIM5Q71RC9 77 aa19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 AMIGO3Q86WK7 504 aa19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 CCDC87Q9NVE4 849 aa19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 STK32BQ9NY57 414 aa19.58■□□□□ 0.73
SNRNP27-202ENST00000409116 MYH14Q7Z406 1995 aaKnown RBP19.57■□□□□ 0.72
SNRNP27-202ENST00000409116 GNPATO15228 680 aa19.57■□□□□ 0.72
SNRNP27-202ENST00000409116 RC3H1Q5TC82 1133 aaKnown RBP19.57■□□□□ 0.72
SNRNP27-202ENST00000409116 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
SNRNP27-202ENST00000409116 HOXB7P09629 217 aa19.56■□□□□ 0.72
SNRNP27-202ENST00000409116 SLC15A2Q16348 729 aa19.56■□□□□ 0.72
SNRNP27-202ENST00000409116 TWISTNBQ3B726 338 aaPredicted RBP19.56■□□□□ 0.72
SNRNP27-202ENST00000409116 HDGFL1Q5TGJ6 251 aa19.56■□□□□ 0.72
SNRNP27-202ENST00000409116 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
SNRNP27-202ENST00000409116 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
SNRNP27-202ENST00000409116 TFCP2L1Q9NZI6 479 aa19.55■□□□□ 0.72
SNRNP27-202ENST00000409116 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
SNRNP27-202ENST00000409116 NBPF26B4DH59 902 aa19.54■□□□□ 0.72
SNRNP27-202ENST00000409116 PHF14O94880 888 aa19.54■□□□□ 0.72
SNRNP27-202ENST00000409116 HMGB2P26583 209 aaKnown RBP19.54■□□□□ 0.72
SNRNP27-202ENST00000409116 NBPF10Q6P3W6 841 aaKnown RBP19.54■□□□□ 0.72
SNRNP27-202ENST00000409116 NBPF15Q8N660 670 aa19.54■□□□□ 0.72
SNRNP27-202ENST00000409116 R3HDM1Q15032 1099 aaKnown RBP19.53■□□□□ 0.72
SNRNP27-202ENST00000409116 UBR3Q6ZT12 1888 aa19.53■□□□□ 0.72
SNRNP27-202ENST00000409116 SOS1Q07889 1333 aaPredicted RBP19.53■□□□□ 0.72
SNRNP27-202ENST00000409116 PSDA5PKW4 1024 aaPredicted RBP19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 ANXA1P04083 346 aa19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 PROSER3Q2NL68 480 aa19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 RTCBQ9Y3I0 505 aaKnown RBP19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 ZNF330Q9Y3S2 320 aaPredicted RBP19.52■□□□□ 0.72
SNRNP27-202ENST00000409116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
SNRNP27-202ENST00000409116 VAMP4O75379 141 aa19.51■□□□□ 0.71
SNRNP27-202ENST00000409116 MYL6BP14649 208 aa19.51■□□□□ 0.71
SNRNP27-202ENST00000409116 CHPF2Q9P2E5 772 aa19.51■□□□□ 0.71
SNRNP27-202ENST00000409116 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
SNRNP27-202ENST00000409116 PDIA6Q15084 440 aa19.51■□□□□ 0.71
SNRNP27-202ENST00000409116 SSFA2P28290 1259 aa19.5■□□□□ 0.71
SNRNP27-202ENST00000409116 PDGFDQ9GZP0 370 aaPredicted RBP19.5■□□□□ 0.71
SNRNP27-202ENST00000409116 ERBB4Q15303 1308 aa19.49■□□□□ 0.71
SNRNP27-202ENST00000409116 COL15A1P39059 1388 aa19.49■□□□□ 0.71
SNRNP27-202ENST00000409116 IL6STP40189 918 aaPredicted RBP19.49■□□□□ 0.71
SNRNP27-202ENST00000409116 EIF5P55010 431 aaKnown RBP19.49■□□□□ 0.71
SNRNP27-202ENST00000409116 CCDC30Q5VVM6 783 aa19.49■□□□□ 0.71
SNRNP27-202ENST00000409116 COL23A1Q86Y22 540 aaPredicted RBP19.49■□□□□ 0.71
SNRNP27-202ENST00000409116 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
SNRNP27-202ENST00000409116 ARHGEF1Q92888 912 aaKnown RBP19.48■□□□□ 0.71
SNRNP27-202ENST00000409116 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNRNP27-202ENST00000409116 DBF4Q9UBU7 674 aaPredicted RBP19.48■□□□□ 0.71
SNRNP27-202ENST00000409116 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
SNRNP27-202ENST00000409116 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
SNRNP27-202ENST00000409116 C4AP0C0L4 1744 aa19.46■□□□□ 0.71
SNRNP27-202ENST00000409116 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
SNRNP27-202ENST00000409116 ARXQ96QS3 562 aa19.46■□□□□ 0.71
SNRNP27-202ENST00000409116 STK31Q9BXU1 1019 aa19.46■□□□□ 0.71
SNRNP27-202ENST00000409116 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
SNRNP27-202ENST00000409116 RFC4P35249 363 aa19.45■□□□□ 0.7
SNRNP27-202ENST00000409116 NPM2Q86SE8 214 aaKnown RBP19.45■□□□□ 0.7
SNRNP27-202ENST00000409116 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
SNRNP27-202ENST00000409116 TBC1D2BQ9UPU7 963 aa19.45■□□□□ 0.7
SNRNP27-202ENST00000409116 TTLL7Q6ZT98 887 aa19.44■□□□□ 0.7
SNRNP27-202ENST00000409116 XAGE3Q8WTP9 111 aa19.44■□□□□ 0.7
SNRNP27-202ENST00000409116 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
SNRNP27-202ENST00000409116 CASZ1Q86V15 1759 aa19.44■□□□□ 0.7
SNRNP27-202ENST00000409116 SLC4A2P04920 1241 aa19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 CT47B1P0C2W7 299 aaPredicted RBP19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 AIMP1Q12904 312 aaKnown RBP19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 DZIP3Q86Y13 1208 aaKnown RBP19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 SSH1Q8WYL5 1049 aa19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 BCL2L13Q9BXK5 485 aa19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 USP42Q9H9J4 1324 aaKnown RBP19.43■□□□□ 0.7
SNRNP27-202ENST00000409116 A0A087WZG4 1122 aa19.42■□□□□ 0.7
SNRNP27-202ENST00000409116 G2E3Q7L622 706 aa19.42■□□□□ 0.7
SNRNP27-202ENST00000409116 ZPR1O75312 459 aa19.41■□□□□ 0.7
SNRNP27-202ENST00000409116 CAMTA2O94983 1202 aa19.41■□□□□ 0.7
SNRNP27-202ENST00000409116 USPL1Q5W0Q7 1092 aa19.41■□□□□ 0.7
SNRNP27-202ENST00000409116 MSL1Q68DK7 614 aa19.41■□□□□ 0.7
SNRNP27-202ENST00000409116 NARFQ9UHQ1 456 aa19.41■□□□□ 0.7
SNRNP27-202ENST00000409116 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
SNRNP27-202ENST00000409116 RARSP54136 660 aaKnown RBP19.4■□□□□ 0.7
SNRNP27-202ENST00000409116 KIF6Q6ZMV9 814 aa19.4■□□□□ 0.7
SNRNP27-202ENST00000409116 ZNF428Q96B54 188 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms