RNA–Protein interactions for RNA: ENST00000408981.6

RPE-203, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-203ENST00000408981 HHIPL1Q96JK4 782 aa12.25□□□□□ -0.45
RPE-203ENST00000408981 CHRDL2Q6WN34 429 aa12.24□□□□□ -0.45
RPE-203ENST00000408981 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
RPE-203ENST00000408981 C2CD5Q86YS7 1000 aa12.24□□□□□ -0.45
RPE-203ENST00000408981 PIGBQ92521 554 aa12.24□□□□□ -0.45
RPE-203ENST00000408981 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
RPE-203ENST00000408981 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
RPE-203ENST00000408981 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
RPE-203ENST00000408981 LTBP3Q9NS15 1303 aa12.23□□□□□ -0.45
RPE-203ENST00000408981 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
RPE-203ENST00000408981 PLA2G5P39877 138 aa12.23□□□□□ -0.45
RPE-203ENST00000408981 FAM122AQ96E09 287 aa12.23□□□□□ -0.45
RPE-203ENST00000408981 RNF186Q9NXI6 227 aa12.23□□□□□ -0.45
RPE-203ENST00000408981 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
RPE-203ENST00000408981 H0YIN7 160 aa12.22□□□□□ -0.45
RPE-203ENST00000408981 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
RPE-203ENST00000408981 SRP68Q9UHB9 627 aaKnown RBP12.22□□□□□ -0.45
RPE-203ENST00000408981 MAP2P11137 1827 aaKnown RBP12.22□□□□□ -0.45
RPE-203ENST00000408981 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
RPE-203ENST00000408981 H0YGN5 161 aa12.21□□□□□ -0.45
RPE-203ENST00000408981 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 PCDH11XQ9BZA7 1347 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 PCDH11YQ9BZA8 1340 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 FBXO46Q6PJ61 603 aaPredicted RBP12.2□□□□□ -0.46
RPE-203ENST00000408981 SYNE4Q8N205 404 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 CCDC24Q8N4L8 307 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 RBM27Q9P2N5 1060 aaKnown RBP12.2□□□□□ -0.46
RPE-203ENST00000408981 TRPM7Q96QT4 1865 aa12.2□□□□□ -0.46
RPE-203ENST00000408981 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
RPE-203ENST00000408981 MKI67P46013 3256 aaKnown RBP12.19□□□□□ -0.46
RPE-203ENST00000408981 ZNF622Q969S3 477 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPE-203ENST00000408981 RAPGEFL1Q9UHV5 662 aa12.19□□□□□ -0.46
RPE-203ENST00000408981 LTN1O94822 1766 aa12.19□□□□□ -0.46
RPE-203ENST00000408981 FAM208AQ9UK61 1670 aaKnown RBP12.19□□□□□ -0.46
RPE-203ENST00000408981 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
RPE-203ENST00000408981 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
RPE-203ENST00000408981 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
RPE-203ENST00000408981 ASAP1Q9ULH1 1129 aa12.18□□□□□ -0.46
RPE-203ENST00000408981 DLEC1Q9Y238 1755 aa12.18□□□□□ -0.46
RPE-203ENST00000408981 INSRP06213 1382 aa12.18□□□□□ -0.46
RPE-203ENST00000408981 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
RPE-203ENST00000408981 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
RPE-203ENST00000408981 TM4SF1P30408 202 aa12.17□□□□□ -0.46
RPE-203ENST00000408981 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
RPE-203ENST00000408981 KIF23Q02241 960 aaPredicted RBP12.17□□□□□ -0.46
RPE-203ENST00000408981 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
RPE-203ENST00000408981 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPE-203ENST00000408981 IP6K1Q92551 441 aa12.17□□□□□ -0.46
RPE-203ENST00000408981 USP42Q9H9J4 1324 aaKnown RBP12.16□□□□□ -0.46
RPE-203ENST00000408981 CEP290O15078 2479 aa12.16□□□□□ -0.46
RPE-203ENST00000408981 LMOD1P29536 600 aaPredicted RBP12.16□□□□□ -0.46
RPE-203ENST00000408981 SNX27Q96L92 541 aa12.16□□□□□ -0.46
RPE-203ENST00000408981 KDM2AQ9Y2K7 1162 aa12.16□□□□□ -0.46
RPE-203ENST00000408981 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
RPE-203ENST00000408981 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
RPE-203ENST00000408981 TMOD3Q9NYL9 352 aa12.15□□□□□ -0.46
RPE-203ENST00000408981 ITGB4P16144 1822 aa12.15□□□□□ -0.46
RPE-203ENST00000408981 CACNA1AO00555 2505 aa12.15□□□□□ -0.46
RPE-203ENST00000408981 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
RPE-203ENST00000408981 HUNKP57058 714 aa12.14□□□□□ -0.47
RPE-203ENST00000408981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.14□□□□□ -0.477e-7■□□□□ 9.5
RPE-203ENST00000408981 CYP27B1O15528 508 aa12.13□□□□□ -0.47
RPE-203ENST00000408981 EN2P19622 333 aaPredicted RBP12.13□□□□□ -0.47
RPE-203ENST00000408981 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
RPE-203ENST00000408981 GPC2Q8N158 579 aa12.13□□□□□ -0.47
RPE-203ENST00000408981 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
RPE-203ENST00000408981 ZNF296Q8WUU4 475 aaPredicted RBP12.13□□□□□ -0.47
RPE-203ENST00000408981 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
RPE-203ENST00000408981 SOGA3Q5TF21 947 aa12.12□□□□□ -0.47
RPE-203ENST00000408981 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
RPE-203ENST00000408981 STXBP5LQ9Y2K9 1186 aa12.12□□□□□ -0.47
RPE-203ENST00000408981 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
RPE-203ENST00000408981 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
RPE-203ENST00000408981 SERPINB2P05120 415 aa12.11□□□□□ -0.47
RPE-203ENST00000408981 ANKRD13DQ6ZTN6 518 aa12.11□□□□□ -0.47
RPE-203ENST00000408981 USP50Q70EL3 339 aaPredicted RBP12.11□□□□□ -0.47
RPE-203ENST00000408981 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
RPE-203ENST00000408981 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
RPE-203ENST00000408981 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
RPE-203ENST00000408981 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
RPE-203ENST00000408981 KDRP35968 1356 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 KTN1Q86UP2 1357 aaKnown RBP12.1□□□□□ -0.47
RPE-203ENST00000408981 CARMIL3Q8ND23 1372 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 EPS15P42566 896 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 RGMBQ6NW40 437 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 NME9Q86XW9 330 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
RPE-203ENST00000408981 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
RPE-203ENST00000408981 SOX1O00570 391 aaPredicted RBP12.09□□□□□ -0.47
RPE-203ENST00000408981 ZPR1O75312 459 aa12.09□□□□□ -0.47
RPE-203ENST00000408981 NFIXQ14938 502 aa12.09□□□□□ -0.47
RPE-203ENST00000408981 USPL1Q5W0Q7 1092 aa12.09□□□□□ -0.47
RPE-203ENST00000408981 SLC4A9Q96Q91 983 aa12.09□□□□□ -0.47
RPE-203ENST00000408981 ZNF277Q9NRM2 450 aaPredicted RBP12.09□□□□□ -0.47
RPE-203ENST00000408981 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
RPE-203ENST00000408981 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
RPE-203ENST00000408981 CSRNP1Q96S65 589 aa12.08□□□□□ -0.48
RPE-203ENST00000408981 PAPPA2Q9BXP8 1791 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms