RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
SNORD88A-201ENST00000408314 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNORD88A-201ENST00000408314 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
SNORD88A-201ENST00000408314 PNISRQ8TF01 805 aaKnown RBP12.03□□□□□ -0.48
SNORD88A-201ENST00000408314 ZBTB1Q9Y2K1 713 aa12.03□□□□□ -0.48
SNORD88A-201ENST00000408314 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.48
SNORD88A-201ENST00000408314 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.49
SNORD88A-201ENST00000408314 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
SNORD88A-201ENST00000408314 ZNF496Q96IT1 587 aaPredicted RBP12.02□□□□□ -0.49
SNORD88A-201ENST00000408314 SRP68Q9UHB9 627 aaKnown RBP12.02□□□□□ -0.49
SNORD88A-201ENST00000408314 MYBBP1AQ9BQG0 1328 aaKnown RBP12.02□□□□□ -0.49
SNORD88A-201ENST00000408314 CANXP27824 592 aaKnown RBP12.01□□□□□ -0.49
SNORD88A-201ENST00000408314 FKBP8Q14318 412 aa12.01□□□□□ -0.49
SNORD88A-201ENST00000408314 USPL1Q5W0Q7 1092 aa12.01□□□□□ -0.49
SNORD88A-201ENST00000408314 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
SNORD88A-201ENST00000408314 EIF5P55010 431 aaKnown RBP12□□□□□ -0.49
SNORD88A-201ENST00000408314 LMOD3Q0VAK6 560 aa12□□□□□ -0.49
SNORD88A-201ENST00000408314 TAF7Q15545 349 aaPredicted RBP12□□□□□ -0.49
SNORD88A-201ENST00000408314 NFE2L2Q16236 605 aa12□□□□□ -0.49
SNORD88A-201ENST00000408314 POLRMTO00411 1230 aaKnown RBP11.99□□□□□ -0.49
SNORD88A-201ENST00000408314 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
SNORD88A-201ENST00000408314 MCM10Q7L590 875 aa11.99□□□□□ -0.49
SNORD88A-201ENST00000408314 PDZRN3Q9UPQ7 1066 aa11.99□□□□□ -0.49
SNORD88A-201ENST00000408314 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
SNORD88A-201ENST00000408314 KIAA1551Q9HCM1 1747 aa11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 TM4SF1P30408 202 aa11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 DDR1Q08345 913 aa11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 BCS1LQ9Y276 419 aa11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 ZNF652Q9Y2D9 606 aa11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
SNORD88A-201ENST00000408314 CARMIL3Q8ND23 1372 aa11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 A0A0G2JLW4 131 aa11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 RGL2O15211 777 aa11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 DPEP1P16444 411 aa11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 NFIXQ14938 502 aa11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 DALRD3Q5D0E6 543 aaKnown RBP11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
SNORD88A-201ENST00000408314 UTRNP46939 3433 aa11.96□□□□□ -0.49
SNORD88A-201ENST00000408314 NPHP1O15259 732 aa11.96□□□□□ -0.49
SNORD88A-201ENST00000408314 SERPINB2P05120 415 aa11.96□□□□□ -0.49
SNORD88A-201ENST00000408314 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.49
SNORD88A-201ENST00000408314 NRXN2Q9P2S2 1712 aa11.96□□□□□ -0.49
SNORD88A-201ENST00000408314 ATP10DQ9P241 1426 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 ARFGEF1Q9Y6D6 1849 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 ADCY9O60503 1353 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 DZIP3Q86Y13 1208 aaKnown RBP11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 BABAM1Q9NWV8 329 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 WWC3Q9ULE0 1092 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 DLG5Q8TDM6 1919 aa11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 BRCA1P38398 1863 aaKnown RBP11.95□□□□□ -0.5
SNORD88A-201ENST00000408314 KCNQ3O43525 872 aa11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 A1BGP04217 495 aa11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 KDM3BQ7LBC6 1761 aa11.94□□□□□ -0.5
SNORD88A-201ENST00000408314 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 BCORQ6W2J9 1755 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 H0YIN7 160 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 PDE6BP35913 854 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 ST5P78524 1137 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 BICDL1Q6ZP65 573 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 USP16Q9Y5T5 823 aa11.93□□□□□ -0.5
SNORD88A-201ENST00000408314 CAMTA2O94983 1202 aa11.92□□□□□ -0.5
SNORD88A-201ENST00000408314 RIPK4P57078 832 aa11.92□□□□□ -0.5
SNORD88A-201ENST00000408314 DLEC1Q9Y238 1755 aa11.92□□□□□ -0.5
SNORD88A-201ENST00000408314 KCNA3P22001 575 aa11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 C1QTNF8P60827 252 aa11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 C2CD5Q86YS7 1000 aa11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 TSPYL4Q9UJ04 414 aa11.91□□□□□ -0.5
SNORD88A-201ENST00000408314 ZC3H4Q9UPT8 1303 aaKnown RBP11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 CHRNA5P30532 468 aa11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
SNORD88A-201ENST00000408314 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
SNORD88A-201ENST00000408314 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
SNORD88A-201ENST00000408314 MIS18AQ9NYP9 233 aa11.89□□□□□ -0.51
SNORD88A-201ENST00000408314 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 ERVV-1B6SEH8 477 aa11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 CALD1Q05682 793 aaKnown RBP11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 SOGA3Q5TF21 947 aa11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
SNORD88A-201ENST00000408314 CNKSR1Q969H4 720 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms