RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
GPN1-202ENST00000407583 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
GPN1-202ENST00000407583 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
GPN1-202ENST00000407583 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
GPN1-202ENST00000407583 ADAMTSL1Q8N6G6 1762 aa11.88□□□□□ -0.51
GPN1-202ENST00000407583 RFC4P35249 363 aa11.88□□□□□ -0.51
GPN1-202ENST00000407583 NME9Q86XW9 330 aa11.88□□□□□ -0.51
GPN1-202ENST00000407583 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
GPN1-202ENST00000407583 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
GPN1-202ENST00000407583 IP6K1Q92551 441 aa11.88□□□□□ -0.51
GPN1-202ENST00000407583 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
GPN1-202ENST00000407583 SLC17A8Q8NDX2 589 aa11.87□□□□□ -0.51
GPN1-202ENST00000407583 ITGB4P16144 1822 aa11.87□□□□□ -0.51
GPN1-202ENST00000407583 PCDH11XQ9BZA7 1347 aa11.87□□□□□ -0.51
GPN1-202ENST00000407583 PCDH11YQ9BZA8 1340 aa11.87□□□□□ -0.51
GPN1-202ENST00000407583 CENPJQ9HC77 1338 aaPredicted RBP11.87□□□□□ -0.51
GPN1-202ENST00000407583 KTN1Q86UP2 1357 aaKnown RBP11.87□□□□□ -0.51
GPN1-202ENST00000407583 RGPD2P0DJD1 1756 aa11.86□□□□□ -0.51
GPN1-202ENST00000407583 CUL9Q8IWT3 2517 aa11.86□□□□□ -0.51
GPN1-202ENST00000407583 MAP2K2P36507 400 aa11.86□□□□□ -0.51
GPN1-202ENST00000407583 HNRNPUQ00839 825 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPN1-202ENST00000407583 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPN1-202ENST00000407583 USHBP1Q8N6Y0 703 aa11.86□□□□□ -0.51
GPN1-202ENST00000407583 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
GPN1-202ENST00000407583 DDX21Q9NR30 783 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPN1-202ENST00000407583 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
GPN1-202ENST00000407583 TTLL6Q8N841 843 aa11.85□□□□□ -0.51
GPN1-202ENST00000407583 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
GPN1-202ENST00000407583 CD163L1Q9NR16 1453 aa11.85□□□□□ -0.51
GPN1-202ENST00000407583 COL6A3P12111 3177 aa11.84□□□□□ -0.51
GPN1-202ENST00000407583 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
GPN1-202ENST00000407583 CYP27B1O15528 508 aa11.84□□□□□ -0.51
GPN1-202ENST00000407583 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
GPN1-202ENST00000407583 CGNL1Q0VF96 1302 aa11.84□□□□□ -0.51
GPN1-202ENST00000407583 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
GPN1-202ENST00000407583 ROCK2O75116 1388 aaKnown RBP11.84□□□□□ -0.51
GPN1-202ENST00000407583 SCN4AP35499 1836 aa11.84□□□□□ -0.51
GPN1-202ENST00000407583 PITPNM2Q9BZ72 1349 aa11.83□□□□□ -0.52
GPN1-202ENST00000407583 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
GPN1-202ENST00000407583 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
GPN1-202ENST00000407583 KDRP35968 1356 aa11.82□□□□□ -0.52
GPN1-202ENST00000407583 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
GPN1-202ENST00000407583 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
GPN1-202ENST00000407583 RAPGEF4Q8WZA2 1011 aa11.82□□□□□ -0.52
GPN1-202ENST00000407583 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
GPN1-202ENST00000407583 DLEC1Q9Y238 1755 aa11.82□□□□□ -0.52
GPN1-202ENST00000407583 MON2Q7Z3U7 1717 aa11.82□□□□□ -0.52
GPN1-202ENST00000407583 EPHX2P34913 555 aa11.81□□□□□ -0.52
GPN1-202ENST00000407583 CIAPIN1Q6FI81 312 aa11.81□□□□□ -0.52
GPN1-202ENST00000407583 HACL1Q9UJ83 578 aa11.81□□□□□ -0.52
GPN1-202ENST00000407583 TLL2Q9Y6L7 1015 aa11.81□□□□□ -0.52
GPN1-202ENST00000407583 SBNO2Q9Y2G9 1366 aa11.81□□□□□ -0.52
GPN1-202ENST00000407583 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
GPN1-202ENST00000407583 TATP17735 454 aaPredicted RBP11.8□□□□□ -0.52
GPN1-202ENST00000407583 HOXC9P31274 260 aa11.8□□□□□ -0.52
GPN1-202ENST00000407583 CST9Q5W186 159 aa11.8□□□□□ -0.52
GPN1-202ENST00000407583 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
GPN1-202ENST00000407583 PRKRIP1Q9H875 184 aaPredicted RBP11.8□□□□□ -0.52
GPN1-202ENST00000407583 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
GPN1-202ENST00000407583 CNTNAP4Q9C0A0 1308 aa11.8□□□□□ -0.52
GPN1-202ENST00000407583 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
GPN1-202ENST00000407583 C21orf2O43822 256 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 ZNF541Q9H0D2 1346 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 TM4SF1P30408 202 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
GPN1-202ENST00000407583 C2CD5Q86YS7 1000 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 STAC3Q96MF2 364 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 TAOK3Q9H2K8 898 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 ATG3Q9NT62 314 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 TMOD3Q9NYL9 352 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 HPS5Q9UPZ3 1129 aa11.79□□□□□ -0.52
GPN1-202ENST00000407583 FER1L6Q2WGJ9 1857 aa11.78□□□□□ -0.52
GPN1-202ENST00000407583 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
GPN1-202ENST00000407583 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
GPN1-202ENST00000407583 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
GPN1-202ENST00000407583 LTBP3Q9NS15 1303 aa11.78□□□□□ -0.52
GPN1-202ENST00000407583 PNMA8AQ86V59 439 aaPredicted RBP11.78□□□□□ -0.52
GPN1-202ENST00000407583 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
GPN1-202ENST00000407583 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
GPN1-202ENST00000407583 TRAF5O00463 557 aa11.77□□□□□ -0.53
GPN1-202ENST00000407583 ZIC5Q96T25 663 aa11.77□□□□□ -0.53
GPN1-202ENST00000407583 CARMIL3Q8ND23 1372 aa11.76□□□□□ -0.53
GPN1-202ENST00000407583 FBLN1P23142 703 aa11.76□□□□□ -0.53
GPN1-202ENST00000407583 AMPHP49418 695 aa11.75□□□□□ -0.53
GPN1-202ENST00000407583 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
GPN1-202ENST00000407583 SAPCD2Q86UD0 394 aa11.75□□□□□ -0.53
GPN1-202ENST00000407583 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
GPN1-202ENST00000407583 H0YIN7 160 aa11.74□□□□□ -0.53
GPN1-202ENST00000407583 CTU1Q7Z7A3 348 aaKnown RBP11.74□□□□□ -0.53
GPN1-202ENST00000407583 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
GPN1-202ENST00000407583 INSRP06213 1382 aa11.74□□□□□ -0.53
GPN1-202ENST00000407583 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
GPN1-202ENST00000407583 MYH14Q7Z406 1995 aaKnown RBP11.73□□□□□ -0.53
GPN1-202ENST00000407583 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
GPN1-202ENST00000407583 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
GPN1-202ENST00000407583 MRS2Q9HD23 443 aa11.73□□□□□ -0.53
GPN1-202ENST00000407583 ZNF622Q969S3 477 aaKnown RBP eCLIP11.72□□□□□ -0.53
GPN1-202ENST00000407583 ZNF831Q5JPB2 1677 aa11.72□□□□□ -0.53
GPN1-202ENST00000407583 NFIXQ14938 502 aa11.71□□□□□ -0.53
GPN1-202ENST00000407583 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms