RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 CAMKK2Q96RR4 588 aa13.91□□□□□ -0.18
PDE4D-206ENST00000405053 COL5A3P25940 1745 aaPredicted RBP13.9□□□□□ -0.18
PDE4D-206ENST00000405053 SF3B2Q13435 895 aaKnown RBP13.9□□□□□ -0.18
PDE4D-206ENST00000405053 LRRC4BQ9NT99 713 aa13.9□□□□□ -0.18
PDE4D-206ENST00000405053 RREB1Q92766 1687 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 CENPBP07199 599 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-206ENST00000405053 EIF2S2P20042 333 aaKnown RBP13.89□□□□□ -0.19
PDE4D-206ENST00000405053 BAG6P46379 1132 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 PDIA6Q15084 440 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 RC3H1Q5TC82 1133 aaKnown RBP13.89□□□□□ -0.19
PDE4D-206ENST00000405053 LINC00116Q8NCU8 138 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 SSH1Q8WYL5 1049 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
PDE4D-206ENST00000405053 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-206ENST00000405053 RCAN3Q9UKA8 241 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 CNTNAP4Q9C0A0 1308 aa13.89□□□□□ -0.19
PDE4D-206ENST00000405053 TAF1LQ8IZX4 1826 aa13.88□□□□□ -0.19
PDE4D-206ENST00000405053 LRP10Q7Z4F1 713 aa13.88□□□□□ -0.19
PDE4D-206ENST00000405053 DDX21Q9NR30 783 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDE4D-206ENST00000405053 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
PDE4D-206ENST00000405053 KCNQ4P56696 695 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 EN1Q05925 392 aaPredicted RBP13.87□□□□□ -0.19
PDE4D-206ENST00000405053 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 NBPF10Q6P3W6 841 aaKnown RBP13.87□□□□□ -0.19
PDE4D-206ENST00000405053 INTS5Q6P9B9 1019 aaKnown RBP13.87□□□□□ -0.19
PDE4D-206ENST00000405053 MRPL50Q8N5N7 158 aaKnown RBP13.87□□□□□ -0.19
PDE4D-206ENST00000405053 NBPF15Q8N660 670 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 CHPF2Q9P2E5 772 aa13.87□□□□□ -0.19
PDE4D-206ENST00000405053 MYH14Q7Z406 1995 aaKnown RBP13.86□□□□□ -0.19
PDE4D-206ENST00000405053 A1BGP04217 495 aa13.86□□□□□ -0.19
PDE4D-206ENST00000405053 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
PDE4D-206ENST00000405053 EZH2Q15910 746 aaKnown RBP13.86□□□□□ -0.19
PDE4D-206ENST00000405053 PROSER3Q2NL68 480 aa13.86□□□□□ -0.19
PDE4D-206ENST00000405053 NECTIN2Q92692 538 aa13.86□□□□□ -0.19
PDE4D-206ENST00000405053 SMC4Q9NTJ3 1288 aa13.86□□□□□ -0.19
PDE4D-206ENST00000405053 HYPKQ9NX55 129 aa13.86□□□□□ -0.19
PDE4D-206ENST00000405053 C4BP0C0L5 1744 aa13.85□□□□□ -0.19
PDE4D-206ENST00000405053 BCAR3O75815 825 aa13.85□□□□□ -0.19
PDE4D-206ENST00000405053 IL6STP40189 918 aaPredicted RBP13.85□□□□□ -0.19
PDE4D-206ENST00000405053 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
PDE4D-206ENST00000405053 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
PDE4D-206ENST00000405053 TCERG1O14776 1098 aaKnown RBP13.84□□□□□ -0.19
PDE4D-206ENST00000405053 EIF5P55010 431 aaKnown RBP13.84□□□□□ -0.19
PDE4D-206ENST00000405053 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
PDE4D-206ENST00000405053 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
PDE4D-206ENST00000405053 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
PDE4D-206ENST00000405053 ANXA1P04083 346 aa13.83□□□□□ -0.2
PDE4D-206ENST00000405053 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
PDE4D-206ENST00000405053 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
PDE4D-206ENST00000405053 MYL6BP14649 208 aa13.82□□□□□ -0.2
PDE4D-206ENST00000405053 PIP4K2AP48426 406 aaPredicted RBP13.82□□□□□ -0.2
PDE4D-206ENST00000405053 FLIIQ13045 1269 aa13.82□□□□□ -0.2
PDE4D-206ENST00000405053 G2E3Q7L622 706 aa13.82□□□□□ -0.2
PDE4D-206ENST00000405053 ARHGAP45Q92619 1136 aa13.82□□□□□ -0.2
PDE4D-206ENST00000405053 PHAXQ9H814 394 aaKnown RBP13.82□□□□□ -0.2
PDE4D-206ENST00000405053 PTPRCP08575 1304 aa13.82□□□□□ -0.2
PDE4D-206ENST00000405053 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
PDE4D-206ENST00000405053 CANXP27824 592 aaKnown RBP13.81□□□□□ -0.2
PDE4D-206ENST00000405053 AK7Q96M32 723 aa13.81□□□□□ -0.2
PDE4D-206ENST00000405053 GNPATO15228 680 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
PDE4D-206ENST00000405053 ADRA2BP18089 450 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 NOB1Q9ULX3 412 aaKnown RBP13.8□□□□□ -0.2
PDE4D-206ENST00000405053 RTCBQ9Y3I0 505 aaKnown RBP13.8□□□□□ -0.2
PDE4D-206ENST00000405053 COL15A1P39059 1388 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 UBR3Q6ZT12 1888 aa13.8□□□□□ -0.2
PDE4D-206ENST00000405053 A0A087WZG4 1122 aa13.79□□□□□ -0.2
PDE4D-206ENST00000405053 RGL2O15211 777 aa13.79□□□□□ -0.2
PDE4D-206ENST00000405053 SSFA2P28290 1259 aa13.79□□□□□ -0.2
PDE4D-206ENST00000405053 AMIGO3Q86WK7 504 aa13.79□□□□□ -0.2
PDE4D-206ENST00000405053 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
PDE4D-206ENST00000405053 RRP1P56182 461 aaKnown RBP13.78□□□□□ -0.2
PDE4D-206ENST00000405053 ZKSCAN2Q63HK3 967 aa13.78□□□□□ -0.2
PDE4D-206ENST00000405053 ATF7IPQ6VMQ6 1270 aa13.78□□□□□ -0.2
PDE4D-206ENST00000405053 TTLL7Q6ZT98 887 aa13.78□□□□□ -0.2
PDE4D-206ENST00000405053 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.78□□□□□ -0.2
PDE4D-206ENST00000405053 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
PDE4D-206ENST00000405053 ANO8Q9HCE9 1232 aaPredicted RBP13.78□□□□□ -0.2
PDE4D-206ENST00000405053 ERVV-1B6SEH8 477 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 ADCY9O60503 1353 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 TRIM27P14373 513 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-206ENST00000405053 SLC15A2Q16348 729 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 NPM2Q86SE8 214 aaKnown RBP13.77□□□□□ -0.21
PDE4D-206ENST00000405053 PLBD2Q8NHP8 589 aa13.77□□□□□ -0.21
PDE4D-206ENST00000405053 FRAT1Q92837 279 aaPredicted RBP13.77□□□□□ -0.21
PDE4D-206ENST00000405053 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
PDE4D-206ENST00000405053 ABCC4O15439 1325 aa13.76□□□□□ -0.21
PDE4D-206ENST00000405053 MAP3K15Q6ZN16 1313 aa13.76□□□□□ -0.21
PDE4D-206ENST00000405053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
PDE4D-206ENST00000405053 PI4KAP2A4QPH2 592 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms