RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 AIMP1Q12904 312 aaKnown RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 CUL4AQ13619 759 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 LMOD2Q6P5Q4 547 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 RHPN1Q8TCX5 695 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 PA2G4Q9UQ80 394 aaKnown RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 LARP1BQ659C4 914 aaKnown RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 C16orf45Q96MC5 204 aaPredicted RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 EYA1Q99502 592 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 PYCARDQ9ULZ3 195 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 FGD1P98174 961 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 RUFY3Q7L099 469 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 LUZP1Q86V48 1076 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 RBM33Q96EV2 1170 aaKnown RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 USP44Q9H0E7 712 aa10.98□□□□□ -0.65
HPS4-203ENST00000402105 C9orf78Q9NZ63 289 aaPredicted RBP10.98□□□□□ -0.65
HPS4-203ENST00000402105 KDM4AO75164 1064 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 F13A1P00488 732 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 UBE2HP62256 183 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 ADCK5Q3MIX3 580 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 INTS4Q96HW7 963 aaKnown RBP10.97□□□□□ -0.65
HPS4-203ENST00000402105 TRIM5Q9C035 493 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 PRR36Q9H6K5 1346 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 IFIT2P09913 472 aaKnown RBP10.97□□□□□ -0.65
HPS4-203ENST00000402105 PTGS1P23219 599 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 BICD2Q8TD16 824 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 ATP6V1DQ9Y5K8 247 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 METP08581 1390 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 ZC3H13Q5T200 1668 aaKnown RBP10.97□□□□□ -0.65
HPS4-203ENST00000402105 PI4KAP2A4QPH2 592 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 PI4KAP1Q8N8J0 262 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 MYRIPQ8NFW9 859 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 PIBF1Q8WXW3 757 aa10.97□□□□□ -0.65
HPS4-203ENST00000402105 NEXMIFQ5QGS0 1516 aa10.96□□□□□ -0.65
HPS4-203ENST00000402105 HSPA4P34932 840 aa10.96□□□□□ -0.65
HPS4-203ENST00000402105 PTH1RQ03431 593 aa10.96□□□□□ -0.65
HPS4-203ENST00000402105 CCDC8Q9H0W5 538 aaPredicted RBP10.96□□□□□ -0.65
HPS4-203ENST00000402105 OSBPL3Q9H4L5 887 aa10.96□□□□□ -0.65
HPS4-203ENST00000402105 PDCL2Q8N4E4 241 aa10.96□□□□□ -0.65
HPS4-203ENST00000402105 FAM184AQ8NB25 1140 aa10.96□□□□□ -0.65
HPS4-203ENST00000402105 PPLO60437 1756 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 SOS1Q07889 1333 aaPredicted RBP10.96□□□□□ -0.66
HPS4-203ENST00000402105 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 HSP90B1P14625 803 aaKnown RBP10.96□□□□□ -0.66
HPS4-203ENST00000402105 U2AF2P26368 475 aaKnown RBP eCLIP10.96□□□□□ -0.661e-6■■□□□ 13.6
HPS4-203ENST00000402105 TERF1P54274 439 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 ANAPC15P60006 121 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 LRMPQ12912 555 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 DDX11Q96FC9 970 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 CYP46A1Q9Y6A2 500 aa10.96□□□□□ -0.66
HPS4-203ENST00000402105 RIOK3O14730 519 aaKnown RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 ZKSCAN1P17029 563 aaPredicted RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 HMGN5P82970 282 aaKnown RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 CLASRPQ8N2M8 674 aaKnown RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 CCDC94Q9BW85 323 aaPredicted RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 CCDC192P0DO97 292 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 CCDC186Q7Z3E2 898 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 MTERF4Q7Z6M4 381 aaKnown RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 ARHGEF40Q8TER5 1519 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 GOLGA6L6A8MZA4 724 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 AACSQ86V21 672 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 TNMDQ9H2S6 317 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 BOLA2Q9H3K6 86 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 CHPF2Q9P2E5 772 aa10.95□□□□□ -0.66
HPS4-203ENST00000402105 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.95□□□□□ -0.66
HPS4-203ENST00000402105 V9GYY5 206 aaPredicted RBP10.95□□□□□ -0.66
HPS4-203ENST00000402105 RGS12O14924 1447 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 SGSM2O43147 1006 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 AP5Z1O43299 807 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 RAB11FIP3O75154 756 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 NRBP1Q9UHY1 535 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 A0A087WWV3 80 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 KIF1BPQ96EK5 621 aa10.94□□□□□ -0.66
HPS4-203ENST00000402105 KCNQ3O43525 872 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 LIG1P18858 919 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 ATP2B3Q16720 1220 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 NUP62CLQ9H1M0 184 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 DACT1Q9NYF0 836 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 NDUFB9Q9Y6M9 179 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 IFT172Q9UG01 1749 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 NAA30Q147X3 362 aaPredicted RBP10.93□□□□□ -0.66
HPS4-203ENST00000402105 ZNF710Q8N1W2 664 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 IL17REQ8NFR9 667 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 FAM227BQ96M60 508 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 LRRC2Q9BYS8 371 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 ABCA9Q8IUA7 1624 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 CDC37L1Q7L3B6 337 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 CPS1P31327 1500 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 LMTK2Q8IWU2 1503 aa10.93□□□□□ -0.66
HPS4-203ENST00000402105 USP32Q8NFA0 1604 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 LETM1O95202 739 aaPredicted RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 ME3Q16798 604 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 TPD52L1Q16890 204 aaPredicted RBP10.92□□□□□ -0.66
HPS4-203ENST00000402105 ANO6Q4KMQ2 910 aa10.92□□□□□ -0.66
HPS4-203ENST00000402105 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms