RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 ZSCAN31Q96LW9 406 aaPredicted RBP16.07■□□□□ 0.16
RERE-204ENST00000400908 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
RERE-204ENST00000400908 BBXQ8WY36 941 aaPredicted RBP16.06■□□□□ 0.16
RERE-204ENST00000400908 ZNF526Q8TF50 670 aaPredicted RBP16.06■□□□□ 0.16
RERE-204ENST00000400908 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
RERE-204ENST00000400908 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 KIF3CO14782 793 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 PDIA4P13667 645 aaKnown RBP16.06■□□□□ 0.16
RERE-204ENST00000400908 MXRA7P84157 204 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 DNA2P51530 1060 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 SREK1Q8WXA9 508 aaKnown RBP16.06■□□□□ 0.16
RERE-204ENST00000400908 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
RERE-204ENST00000400908 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
RERE-204ENST00000400908 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
RERE-204ENST00000400908 ALS2CR12Q96Q35 445 aa16.05■□□□□ 0.16
RERE-204ENST00000400908 PSMD1Q99460 953 aa16.05■□□□□ 0.16
RERE-204ENST00000400908 NSRP1Q9H0G5 558 aaKnown RBP16.05■□□□□ 0.16
RERE-204ENST00000400908 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
RERE-204ENST00000400908 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
RERE-204ENST00000400908 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
RERE-204ENST00000400908 ATP2C2O75185 946 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
RERE-204ENST00000400908 BCAR3O75815 825 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 IRX3P78415 501 aaPredicted RBP16.04■□□□□ 0.16
RERE-204ENST00000400908 PDZRN3Q9UPQ7 1066 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
RERE-204ENST00000400908 DYNC1I1O14576 645 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 MSL1Q68DK7 614 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 SSX2IPQ9Y2D8 614 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 IKBKGQ9Y6K9 419 aa16.04■□□□□ 0.16
RERE-204ENST00000400908 ZSCAN25Q6NSZ9 544 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 CNNM1Q9NRU3 951 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 TCOF1Q13428 1488 aaKnown RBP16.03■□□□□ 0.16
RERE-204ENST00000400908 BLOC1S2Q6QNY1 142 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 YEATS4O95619 227 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 CCDC30Q5VVM6 783 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 APBB1IPQ7Z5R6 666 aaPredicted RBP16.03■□□□□ 0.16
RERE-204ENST00000400908 RPUSD2Q8IZ73 545 aaKnown RBP16.03■□□□□ 0.16
RERE-204ENST00000400908 DDX12PQ92771 950 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 ANO10Q9NW15 660 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 PDRG1Q9NUG6 133 aa16.03■□□□□ 0.16
RERE-204ENST00000400908 PLCH2O75038 1416 aa16.02■□□□□ 0.16
RERE-204ENST00000400908 FGFR1OPO95684 399 aaKnown RBP16.02■□□□□ 0.16
RERE-204ENST00000400908 PPP4R3BQ5MIZ7 849 aa16.02■□□□□ 0.16
RERE-204ENST00000400908 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.16
RERE-204ENST00000400908 IVLP07476 585 aa16.02■□□□□ 0.16
RERE-204ENST00000400908 KIF6Q6ZMV9 814 aa16.02■□□□□ 0.16
RERE-204ENST00000400908 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.16
RERE-204ENST00000400908 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.15
RERE-204ENST00000400908 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.15
RERE-204ENST00000400908 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.15
RERE-204ENST00000400908 SYCE3A1L190 88 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 SETSIPP0DME0 302 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 TDRD12Q587J7 1177 aaKnown RBP16.01■□□□□ 0.15
RERE-204ENST00000400908 HSF2BPO75031 334 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 MCM4P33991 863 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 DENND4BO75064 1496 aaPredicted RBP16.01■□□□□ 0.15
RERE-204ENST00000400908 A0A1W2PRG0 241 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 TPD52P55327 224 aaPredicted RBP16.01■□□□□ 0.15
RERE-204ENST00000400908 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 SMC6Q96SB8 1091 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 FERMT1Q9BQL6 677 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 GAS2L2Q8NHY3 880 aa16.01■□□□□ 0.15
RERE-204ENST00000400908 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
RERE-204ENST00000400908 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.01■□□□□ 0.15
RERE-204ENST00000400908 NEMFO60524 1076 aa16■□□□□ 0.15
RERE-204ENST00000400908 KIF4AO95239 1232 aa16■□□□□ 0.15
RERE-204ENST00000400908 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
RERE-204ENST00000400908 TNIP1Q15025 636 aa16■□□□□ 0.15
RERE-204ENST00000400908 FBXO31Q5XUX0 539 aaPredicted RBP16■□□□□ 0.15
RERE-204ENST00000400908 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
RERE-204ENST00000400908 GNAI2P04899 355 aa16■□□□□ 0.15
RERE-204ENST00000400908 PBRM1Q86U86 1689 aa16■□□□□ 0.15
RERE-204ENST00000400908 WAPLQ7Z5K2 1190 aa16■□□□□ 0.15
RERE-204ENST00000400908 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
RERE-204ENST00000400908 WDR63Q8IWG1 891 aa16■□□□□ 0.15
RERE-204ENST00000400908 FEZ2Q9UHY8 353 aaPredicted RBP16■□□□□ 0.15
RERE-204ENST00000400908 CAMK4Q16566 473 aa16■□□□□ 0.15
RERE-204ENST00000400908 CCDC96Q2M329 555 aa16■□□□□ 0.15
RERE-204ENST00000400908 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 IDI1Q13907 227 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 MIPOL1Q8TD10 442 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 ZFP91Q96JP5 570 aaPredicted RBP15.99■□□□□ 0.15
RERE-204ENST00000400908 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 NOS1P29475 1434 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
RERE-204ENST00000400908 DRC1Q96MC2 740 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 HYPKQ9NX55 129 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 CPSF2Q9P2I0 782 aaKnown RBP15.99■□□□□ 0.15
RERE-204ENST00000400908 ZFYP08048 801 aaPredicted RBP15.99■□□□□ 0.15
RERE-204ENST00000400908 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 CKAP4Q07065 602 aaKnown RBP15.99■□□□□ 0.15
RERE-204ENST00000400908 FERMT2Q96AC1 680 aa15.99■□□□□ 0.15
RERE-204ENST00000400908 KRT32Q14532 448 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms