RNA–Protein interactions for RNA: ENST00000400181.8

KDM1A-202, Transcript of lysine demethylase 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM1A, Length 3,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-202ENST00000400181 RUFY3Q7L099 469 aa21.69■■□□□ 1.06
KDM1A-202ENST00000400181 CASTP20810 708 aaKnown RBP21.69■■□□□ 1.06
KDM1A-202ENST00000400181 BCL2L12Q9HB09 334 aa21.68■■□□□ 1.06
KDM1A-202ENST00000400181 PRR36Q9H6K5 1346 aa21.68■■□□□ 1.06
KDM1A-202ENST00000400181 F13A1P00488 732 aa21.68■■□□□ 1.06
KDM1A-202ENST00000400181 METP08581 1390 aa21.68■■□□□ 1.06
KDM1A-202ENST00000400181 CAMK4Q16566 473 aa21.67■■□□□ 1.06
KDM1A-202ENST00000400181 ATP2B3Q16720 1220 aa21.67■■□□□ 1.06
KDM1A-202ENST00000400181 CRB1P82279 1406 aa21.67■■□□□ 1.06
KDM1A-202ENST00000400181 IGSF3O75054 1194 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 FERMT3Q86UX7 667 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 LIMCH1Q9UPQ0 1083 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 DIP2CQ9Y2E4 1556 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 TTC21BQ7Z4L5 1316 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 GJB2P29033 226 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 FAM173BQ6P4H8 233 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 USP44Q9H0E7 712 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 STAP2Q9UGK3 403 aa21.66■■□□□ 1.06
KDM1A-202ENST00000400181 CCDC30Q5VVM6 783 aa21.65■■□□□ 1.06
KDM1A-202ENST00000400181 NECAB1Q8N987 351 aa21.65■■□□□ 1.06
KDM1A-202ENST00000400181 KCNF1Q9H3M0 494 aa21.65■■□□□ 1.06
KDM1A-202ENST00000400181 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.65■■□□□ 1.06
KDM1A-202ENST00000400181 RIOK3O14730 519 aaKnown RBP21.64■■□□□ 1.06
KDM1A-202ENST00000400181 SGSM2O43147 1006 aa21.64■■□□□ 1.05
KDM1A-202ENST00000400181 ACEP12821 1306 aa21.64■■□□□ 1.05
KDM1A-202ENST00000400181 EIF2S2P20042 333 aaKnown RBP21.64■■□□□ 1.05
KDM1A-202ENST00000400181 CHAF1AQ13111 956 aaPredicted RBP21.64■■□□□ 1.05
KDM1A-202ENST00000400181 PHAXQ9H814 394 aaKnown RBP21.64■■□□□ 1.05
KDM1A-202ENST00000400181 RAD50Q92878 1312 aa21.63■■□□□ 1.05
KDM1A-202ENST00000400181 SRGAP3O43295 1099 aa21.63■■□□□ 1.05
KDM1A-202ENST00000400181 LETM1O95202 739 aaPredicted RBP21.63■■□□□ 1.05
KDM1A-202ENST00000400181 ZSCAN20P17040 1043 aaPredicted RBP21.63■■□□□ 1.05
KDM1A-202ENST00000400181 OS9Q13438 667 aaPredicted RBP21.63■■□□□ 1.05
KDM1A-202ENST00000400181 JAKMIP1Q96N16 626 aaKnown RBP21.63■■□□□ 1.05
KDM1A-202ENST00000400181 TMEM87AQ8NBN3 555 aa21.63■■□□□ 1.05
KDM1A-202ENST00000400181 PREX1Q8TCU6 1659 aa21.63■■□□□ 1.05
KDM1A-202ENST00000400181 PDCL2Q8N4E4 241 aa21.62■■□□□ 1.05
KDM1A-202ENST00000400181 RHPN1Q8TCX5 695 aa21.62■■□□□ 1.05
KDM1A-202ENST00000400181 LTV1Q96GA3 475 aaPredicted RBP21.62■■□□□ 1.05
KDM1A-202ENST00000400181 PRPF40BQ6NWY9 871 aaKnown RBP21.62■■□□□ 1.05
KDM1A-202ENST00000400181 DRC7Q8IY82 874 aa21.62■■□□□ 1.05
KDM1A-202ENST00000400181 TTC14Q96N46 770 aa21.62■■□□□ 1.05
KDM1A-202ENST00000400181 PTGS1P23219 599 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 ADCK5Q3MIX3 580 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 CKAP2LQ8IYA6 745 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 ATP6V1DQ9Y5K8 247 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 SSH2Q76I76 1423 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 SOS1Q07889 1333 aaPredicted RBP21.61■■□□□ 1.05
KDM1A-202ENST00000400181 U2AF2P26368 475 aaKnown RBP eCLIP21.61■■□□□ 1.058e-7■■□□□ 14.1
KDM1A-202ENST00000400181 AMPHP49418 695 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 KIAA1524Q8TCG1 905 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 LSG1Q9H089 658 aaKnown RBP21.61■■□□□ 1.05
KDM1A-202ENST00000400181 SPTLC3Q9NUV7 552 aa21.61■■□□□ 1.05
KDM1A-202ENST00000400181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.6■■□□□ 1.05
KDM1A-202ENST00000400181 CNTROBQ8N137 903 aa21.6■■□□□ 1.05
KDM1A-202ENST00000400181 PI4K2BQ8TCG2 481 aa21.6■■□□□ 1.05
KDM1A-202ENST00000400181 LUZP1Q86V48 1076 aa21.6■■□□□ 1.05
KDM1A-202ENST00000400181 TCEANC2Q96MN5 208 aa21.6■■□□□ 1.05
KDM1A-202ENST00000400181 DIAPH3Q9NSV4 1193 aa21.6■■□□□ 1.05
KDM1A-202ENST00000400181 DMTNQ08495 405 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 MTMR6Q9Y217 621 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 PTH1RQ03431 593 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 PDRG1Q9NUG6 133 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 NUTM2GQ5VZR2 741 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 EYA1Q99502 592 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 FUCA2Q9BTY2 467 aa21.59■■□□□ 1.05
KDM1A-202ENST00000400181 KCNJ4P48050 445 aa21.58■■□□□ 1.05
KDM1A-202ENST00000400181 NBPF7P0C2Y1 421 aaPredicted RBP21.58■■□□□ 1.04
KDM1A-202ENST00000400181 CCDC192P0DO97 292 aa21.58■■□□□ 1.04
KDM1A-202ENST00000400181 GTF2F1P35269 517 aaKnown RBP eCLIP21.58■■□□□ 1.044e-12■■■■■ 26.8
KDM1A-202ENST00000400181 LRMPQ12912 555 aa21.58■■□□□ 1.04
KDM1A-202ENST00000400181 ANXA1P04083 346 aa21.57■■□□□ 1.04
KDM1A-202ENST00000400181 HDGFL1Q5TGJ6 251 aa21.57■■□□□ 1.04
KDM1A-202ENST00000400181 C16orf45Q96MC5 204 aaPredicted RBP21.57■■□□□ 1.04
KDM1A-202ENST00000400181 HYPKQ9NX55 129 aa21.57■■□□□ 1.04
KDM1A-202ENST00000400181 TFIP11Q9UBB9 837 aaKnown RBP21.57■■□□□ 1.04
KDM1A-202ENST00000400181 LIG1P18858 919 aa21.56■■□□□ 1.04
KDM1A-202ENST00000400181 SSH3Q8TE77 659 aa21.56■■□□□ 1.04
KDM1A-202ENST00000400181 GOLGA6L6A8MZA4 724 aa21.55■■□□□ 1.04
KDM1A-202ENST00000400181 LARP1BQ659C4 914 aaKnown RBP21.55■■□□□ 1.04
KDM1A-202ENST00000400181 CCDC186Q7Z3E2 898 aa21.55■■□□□ 1.04
KDM1A-202ENST00000400181 NRBP1Q9UHY1 535 aa21.55■■□□□ 1.04
KDM1A-202ENST00000400181 COL9A3Q14050 684 aaPredicted RBP21.55■■□□□ 1.04
KDM1A-202ENST00000400181 A0A0U1RQG5 324 aaPredicted RBP21.54■■□□□ 1.04
KDM1A-202ENST00000400181 ME3Q16798 604 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 TTC6Q86TZ1 520 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 GOLGA6L4A6NEF3 574 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 DLC1Q96QB1 1528 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 RIMS1Q86UR5 1692 aaKnown RBP21.54■■□□□ 1.04
KDM1A-202ENST00000400181 A2ML1A8K2U0 1454 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 NUP62CLQ9H1M0 184 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 CYP46A1Q9Y6A2 500 aa21.54■■□□□ 1.04
KDM1A-202ENST00000400181 CDC37L1Q7L3B6 337 aa21.53■■□□□ 1.04
KDM1A-202ENST00000400181 NAA30Q147X3 362 aaPredicted RBP21.53■■□□□ 1.04
KDM1A-202ENST00000400181 GNAT3A8MTJ3 354 aa21.52■■□□□ 1.04
KDM1A-202ENST00000400181 STK3Q13188 491 aa21.52■■□□□ 1.04
KDM1A-202ENST00000400181 TAF7Q15545 349 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms