RNA–Protein interactions for RNA: ENST00000399878.7

SEL1L3-202, Transcript of SEL1L family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L3, Length 4,520 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-202ENST00000399878 HIP1O00291 1037 aa21.59■■□□□ 1.05
SEL1L3-202ENST00000399878 CASTP20810 708 aaKnown RBP21.59■■□□□ 1.05
SEL1L3-202ENST00000399878 KSR2Q6VAB6 950 aa21.59■■□□□ 1.05
SEL1L3-202ENST00000399878 PLEKHF1Q96S99 279 aa21.59■■□□□ 1.05
SEL1L3-202ENST00000399878 KIF1BO60333 1816 aa21.59■■□□□ 1.05
SEL1L3-202ENST00000399878 LMBR1LQ6UX01 489 aa21.58■■□□□ 1.05
SEL1L3-202ENST00000399878 BLOC1S2Q6QNY1 142 aa21.58■■□□□ 1.05
SEL1L3-202ENST00000399878 TTC22Q5TAA0 569 aa21.58■■□□□ 1.04
SEL1L3-202ENST00000399878 RNF123Q5XPI4 1314 aa21.58■■□□□ 1.04
SEL1L3-202ENST00000399878 TET3O43151 1660 aa21.58■■□□□ 1.04
SEL1L3-202ENST00000399878 GRM8O00222 908 aa21.58■■□□□ 1.04
SEL1L3-202ENST00000399878 PPFIA3O75145 1194 aa21.58■■□□□ 1.04
SEL1L3-202ENST00000399878 TRIM29Q14134 588 aa21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 ERICH2A1L162 156 aa21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 PDE1AP54750 535 aa21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 SIRT1Q96EB6 747 aa21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 ECHDC1Q9NTX5 307 aa21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 IFIT1P09914 478 aaKnown RBP21.57■■□□□ 1.04
SEL1L3-202ENST00000399878 GOLGA6L6A8MZA4 724 aa21.56■■□□□ 1.04
SEL1L3-202ENST00000399878 VPS53Q5VIR6 699 aa21.56■■□□□ 1.04
SEL1L3-202ENST00000399878 LDHAL6AQ6ZMR3 332 aa21.56■■□□□ 1.04
SEL1L3-202ENST00000399878 CWC25Q9NXE8 425 aaPredicted RBP21.56■■□□□ 1.04
SEL1L3-202ENST00000399878 SMC5Q8IY18 1101 aa21.56■■□□□ 1.04
SEL1L3-202ENST00000399878 CHAF1AQ13111 956 aaPredicted RBP21.55■■□□□ 1.04
SEL1L3-202ENST00000399878 KLHDC4Q8TBB5 520 aa21.55■■□□□ 1.04
SEL1L3-202ENST00000399878 PLEKHG1Q9ULL1 1385 aa21.55■■□□□ 1.04
SEL1L3-202ENST00000399878 ZNF790Q6PG37 636 aa21.55■■□□□ 1.04
SEL1L3-202ENST00000399878 FERMT3Q86UX7 667 aa21.55■■□□□ 1.04
SEL1L3-202ENST00000399878 ATP8B2P98198 1209 aa21.55■■□□□ 1.04
SEL1L3-202ENST00000399878 TBC1D32Q96NH3 1257 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 TMEM94Q12767 1356 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 DDX11Q96FC9 970 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 GOLIM4O00461 696 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 NRDCO43847 1150 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 PHF14O94880 888 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 LRP2BPQ9P2M1 347 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 DDX46Q7L014 1031 aaKnown RBP21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 DCTPP1Q9H773 170 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 PDRG1Q9NUG6 133 aa21.54■■□□□ 1.04
SEL1L3-202ENST00000399878 USP19O94966 1318 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 MARCH6O60337 910 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 DDB1Q16531 1140 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 AMOTL1Q8IY63 956 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 DCAF5Q96JK2 942 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 KIAA2012Q0VF49 1180 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 A1BGP04217 495 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 ZNF496Q96IT1 587 aaPredicted RBP21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 TCEANC2Q96MN5 208 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 ARAP3Q8WWN8 1544 aa21.53■■□□□ 1.04
SEL1L3-202ENST00000399878 LINS1Q8NG48 757 aa21.52■■□□□ 1.04
SEL1L3-202ENST00000399878 RAI14Q9P0K7 980 aa21.52■■□□□ 1.04
SEL1L3-202ENST00000399878 MCM2P49736 904 aa21.52■■□□□ 1.04
SEL1L3-202ENST00000399878 ARID3AQ99856 593 aa21.52■■□□□ 1.04
SEL1L3-202ENST00000399878 A2ML1A8K2U0 1454 aa21.52■■□□□ 1.04
SEL1L3-202ENST00000399878 RNF17Q9BXT8 1623 aaKnown RBP21.52■■□□□ 1.04
SEL1L3-202ENST00000399878 NBPF7P0C2Y1 421 aaPredicted RBP21.52■■□□□ 1.03
SEL1L3-202ENST00000399878 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.51■■□□□ 1.034e-6■■□□□ 12.7
SEL1L3-202ENST00000399878 CCDC83Q8IWF9 413 aa21.51■■□□□ 1.03
SEL1L3-202ENST00000399878 ZNF521Q96K83 1311 aa21.51■■□□□ 1.03
SEL1L3-202ENST00000399878 IQSEC3Q9UPP2 1182 aaPredicted RBP21.51■■□□□ 1.03
SEL1L3-202ENST00000399878 ZPR1O75312 459 aa21.5■■□□□ 1.03
SEL1L3-202ENST00000399878 MCM4P33991 863 aa21.5■■□□□ 1.03
SEL1L3-202ENST00000399878 BECN2A8MW95 431 aa21.5■■□□□ 1.03
SEL1L3-202ENST00000399878 UNC13BO14795 1591 aa21.5■■□□□ 1.03
SEL1L3-202ENST00000399878 ABCA9Q8IUA7 1624 aa21.5■■□□□ 1.03
SEL1L3-202ENST00000399878 PNMA6EA0A0J9YXQ4 647 aa21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 ATP6V1AP38606 617 aa21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 LARP1BQ659C4 914 aaKnown RBP21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 MPNDQ8N594 471 aa21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 PLEKHM2Q8IWE5 1019 aa21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 ARHGAP31Q2M1Z3 1444 aa21.49■■□□□ 1.03
SEL1L3-202ENST00000399878 CLSTN1O94985 981 aa21.48■■□□□ 1.03
SEL1L3-202ENST00000399878 DDX21Q9NR30 783 aaKnown RBP eCLIP21.48■■□□□ 1.03
SEL1L3-202ENST00000399878 NLRP1Q9C000 1473 aa21.48■■□□□ 1.03
SEL1L3-202ENST00000399878 GNL3LQ9NVN8 582 aaKnown RBP21.48■■□□□ 1.03
SEL1L3-202ENST00000399878 BRPF3Q9ULD4 1205 aa21.48■■□□□ 1.03
SEL1L3-202ENST00000399878 HELBQ8NG08 1087 aaPredicted RBP21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 E9PCH4 1651 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 TRPM1Q7Z4N2 1603 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 TRIM34Q9BYJ4 488 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 KDM2BQ8NHM5 1336 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 TDO2P48775 406 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 MAP3K4Q9Y6R4 1608 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 ANKRD18BA2A2Z9 1011 aa21.47■■□□□ 1.03
SEL1L3-202ENST00000399878 SETD1BQ9UPS6 1966 aaKnown RBP21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 SHROOM2Q13796 1616 aa21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 SSFA2P28290 1259 aa21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 HAND2P61296 217 aa21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 TRMT2AQ8IZ69 625 aaKnown RBP21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 USP16Q9Y5T5 823 aa21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 NUP133Q8WUM0 1156 aa21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 PIBF1Q8WXW3 757 aa21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 BICC1Q9H694 974 aaKnown RBP21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 PES1O00541 588 aaKnown RBP21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 EIF4A1P60842 406 aaKnown RBP21.46■■□□□ 1.03
SEL1L3-202ENST00000399878 USP6P35125 1406 aa21.45■■□□□ 1.02
SEL1L3-202ENST00000399878 FAM89AQ96GI7 184 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms