RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 FKBP8Q14318 412 aa20.77■□□□□ 0.92
TNRC18-202ENST00000399434 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
TNRC18-202ENST00000399434 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
TNRC18-202ENST00000399434 PDIA6Q15084 440 aa20.76■□□□□ 0.91
TNRC18-202ENST00000399434 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
TNRC18-202ENST00000399434 TAF1LQ8IZX4 1826 aa20.76■□□□□ 0.91
TNRC18-202ENST00000399434 ANXA1P04083 346 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 NEFLP07196 543 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 ZKSCAN2Q63HK3 967 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 VSIG10Q8N0Z9 540 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
TNRC18-202ENST00000399434 ATF7IPQ6VMQ6 1270 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 DNAJC10Q8IXB1 793 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 PANK1Q8TE04 598 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 STK31Q9BXU1 1019 aa20.75■□□□□ 0.91
TNRC18-202ENST00000399434 NUP188Q5SRE5 1749 aa20.74■□□□□ 0.91
TNRC18-202ENST00000399434 LRP10Q7Z4F1 713 aa20.74■□□□□ 0.91
TNRC18-202ENST00000399434 RBM42Q9BTD8 480 aaKnown RBP20.74■□□□□ 0.91
TNRC18-202ENST00000399434 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
TNRC18-202ENST00000399434 ARHGAP45Q92619 1136 aa20.73■□□□□ 0.91
TNRC18-202ENST00000399434 CRBNQ96SW2 442 aa20.73■□□□□ 0.91
TNRC18-202ENST00000399434 PHAXQ9H814 394 aaKnown RBP20.73■□□□□ 0.91
TNRC18-202ENST00000399434 ABCC4O15439 1325 aa20.72■□□□□ 0.91
TNRC18-202ENST00000399434 PDE3AQ14432 1141 aa20.72■□□□□ 0.91
TNRC18-202ENST00000399434 CLUAP1Q96AJ1 413 aa20.72■□□□□ 0.91
TNRC18-202ENST00000399434 DDX21Q9NR30 783 aaKnown RBP eCLIP20.72■□□□□ 0.91
TNRC18-202ENST00000399434 DBF4Q9UBU7 674 aaPredicted RBP20.72■□□□□ 0.91
TNRC18-202ENST00000399434 ARFGEF2Q9Y6D5 1785 aa20.72■□□□□ 0.91
TNRC18-202ENST00000399434 EP400Q96L91 3159 aa20.71■□□□□ 0.91
TNRC18-202ENST00000399434 PTPRCP08575 1304 aa20.71■□□□□ 0.91
TNRC18-202ENST00000399434 NBPF26B4DH59 902 aa20.71■□□□□ 0.91
TNRC18-202ENST00000399434 PIP4K2AP48426 406 aaPredicted RBP20.71■□□□□ 0.91
TNRC18-202ENST00000399434 FLIIQ13045 1269 aa20.71■□□□□ 0.91
TNRC18-202ENST00000399434 NBPF14Q5TI25 921 aa20.71■□□□□ 0.91
TNRC18-202ENST00000399434 NBPF10Q6P3W6 841 aaKnown RBP20.71■□□□□ 0.91
TNRC18-202ENST00000399434 NBPF15Q8N660 670 aa20.71■□□□□ 0.91
TNRC18-202ENST00000399434 SMARCC1Q92922 1105 aaPredicted RBP20.71■□□□□ 0.91
TNRC18-202ENST00000399434 BCL11BQ9C0K0 894 aaPredicted RBP20.71■□□□□ 0.91
TNRC18-202ENST00000399434 ERBB4Q15303 1308 aa20.7■□□□□ 0.9
TNRC18-202ENST00000399434 LOC102724428A0A0B4J2F2 783 aa20.7■□□□□ 0.9
TNRC18-202ENST00000399434 SIK1P57059 783 aa20.7■□□□□ 0.9
TNRC18-202ENST00000399434 ITPK1Q13572 414 aa20.7■□□□□ 0.9
TNRC18-202ENST00000399434 EXOC6Q8TAG9 804 aa20.7■□□□□ 0.9
TNRC18-202ENST00000399434 IPO8O15397 1037 aaKnown RBP20.69■□□□□ 0.9
TNRC18-202ENST00000399434 A1BGP04217 495 aa20.69■□□□□ 0.9
TNRC18-202ENST00000399434 DZIP1LQ8IYY4 767 aaKnown RBP20.69■□□□□ 0.9
TNRC18-202ENST00000399434 CHMP4AQ9BY43 222 aa20.69■□□□□ 0.9
TNRC18-202ENST00000399434 RGPD3A6NKT7 1758 aaPredicted RBP20.69■□□□□ 0.9
TNRC18-202ENST00000399434 RGPD4Q7Z3J3 1758 aa20.69■□□□□ 0.9
TNRC18-202ENST00000399434 CYP19A1P11511 503 aaPredicted RBP20.69■□□□□ 0.9
TNRC18-202ENST00000399434 PXDNLA1KZ92 1463 aa20.68■□□□□ 0.9
TNRC18-202ENST00000399434 ADCY9O60503 1353 aa20.68■□□□□ 0.9
TNRC18-202ENST00000399434 TRIM37O94972 964 aa20.68■□□□□ 0.9
TNRC18-202ENST00000399434 API5Q9BZZ5 524 aaKnown RBP20.68■□□□□ 0.9
TNRC18-202ENST00000399434 TMEM57Q8N5G2 664 aa20.67■□□□□ 0.9
TNRC18-202ENST00000399434 HYPKQ9NX55 129 aa20.67■□□□□ 0.9
TNRC18-202ENST00000399434 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
TNRC18-202ENST00000399434 F6X3S4 739 aa20.66■□□□□ 0.9
TNRC18-202ENST00000399434 MYL6BP14649 208 aa20.66■□□□□ 0.9
TNRC18-202ENST00000399434 TEX13AQ9BXU3 409 aaPredicted RBP20.66■□□□□ 0.9
TNRC18-202ENST00000399434 C4BP0C0L5 1744 aa20.66■□□□□ 0.9
TNRC18-202ENST00000399434 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
TNRC18-202ENST00000399434 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
TNRC18-202ENST00000399434 FTSJ3Q8IY81 847 aaKnown RBP20.65■□□□□ 0.9
TNRC18-202ENST00000399434 KCNQ4P56696 695 aa20.64■□□□□ 0.89
TNRC18-202ENST00000399434 LINC00116Q8NCU8 138 aa20.64■□□□□ 0.89
TNRC18-202ENST00000399434 ZBTB1Q9Y2K1 713 aa20.64■□□□□ 0.89
TNRC18-202ENST00000399434 STARD3NLO95772 234 aa20.63■□□□□ 0.89
TNRC18-202ENST00000399434 MS4A1P11836 297 aa20.63■□□□□ 0.89
TNRC18-202ENST00000399434 MVPQ14764 893 aaKnown RBP20.63■□□□□ 0.89
TNRC18-202ENST00000399434 XAGE3Q8WTP9 111 aa20.63■□□□□ 0.89
TNRC18-202ENST00000399434 BCORQ6W2J9 1755 aa20.63■□□□□ 0.89
TNRC18-202ENST00000399434 INTS5Q6P9B9 1019 aaKnown RBP20.62■□□□□ 0.89
TNRC18-202ENST00000399434 AFDNP55196 1824 aaKnown RBP20.62■□□□□ 0.89
TNRC18-202ENST00000399434 ERICH6BQ5W0A0 696 aa20.62■□□□□ 0.89
TNRC18-202ENST00000399434 INTS3Q68E01 1043 aaKnown RBP20.62■□□□□ 0.89
TNRC18-202ENST00000399434 ANKRD36CQ5JPF3 1778 aa20.61■□□□□ 0.89
TNRC18-202ENST00000399434 CRKLP46109 303 aaKnown RBP20.61■□□□□ 0.89
TNRC18-202ENST00000399434 COPS6Q7L5N1 327 aa20.61■□□□□ 0.89
TNRC18-202ENST00000399434 ATP10DQ9P241 1426 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 UBR3Q6ZT12 1888 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 PI4KAP2A4QPH2 592 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 AIMP1Q12904 312 aaKnown RBP20.6■□□□□ 0.89
TNRC18-202ENST00000399434 TTLL7Q6ZT98 887 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 ITPRIPQ8IWB1 547 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 PI4KAP1Q8N8J0 262 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 CCDC87Q9NVE4 849 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 CCNL1Q9UK58 526 aaPredicted RBP20.6■□□□□ 0.89
TNRC18-202ENST00000399434 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
TNRC18-202ENST00000399434 LRRC4BQ9NT99 713 aa20.59■□□□□ 0.89
TNRC18-202ENST00000399434 SCN7AQ01118 1682 aa20.59■□□□□ 0.89
TNRC18-202ENST00000399434 CNTNAP4Q9C0A0 1308 aa20.59■□□□□ 0.89
TNRC18-202ENST00000399434 KSR2Q6VAB6 950 aa20.58■□□□□ 0.89
TNRC18-202ENST00000399434 ILDR2Q71H61 639 aa20.58■□□□□ 0.89
TNRC18-202ENST00000399434 NUP98P52948 1817 aa20.58■□□□□ 0.89
TNRC18-202ENST00000399434 TUBGCP6Q96RT7 1819 aa20.58■□□□□ 0.89
TNRC18-202ENST00000399434 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
TNRC18-202ENST00000399434 MAP3K2Q9Y2U5 619 aa20.57■□□□□ 0.88
TNRC18-202ENST00000399434 SLC4A10Q6U841 1118 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms