RNA–Protein interactions for RNA: ENST00000399010.5

TTC3-203, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene TTC3, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-203ENST00000399010 LINC00116Q8NCU8 138 aa23.72■■□□□ 1.39
TTC3-203ENST00000399010 MYH14Q7Z406 1995 aaKnown RBP23.72■■□□□ 1.39
TTC3-203ENST00000399010 STARD3NLO95772 234 aa23.71■■□□□ 1.39
TTC3-203ENST00000399010 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
TTC3-203ENST00000399010 PIP4K2AP48426 406 aaPredicted RBP23.71■■□□□ 1.39
TTC3-203ENST00000399010 CCDC30Q5VVM6 783 aa23.71■■□□□ 1.39
TTC3-203ENST00000399010 EZH2Q15910 746 aaKnown RBP23.71■■□□□ 1.39
TTC3-203ENST00000399010 SLC27A3Q5K4L6 730 aa23.71■■□□□ 1.39
TTC3-203ENST00000399010 CCDC125Q86Z20 511 aa23.71■■□□□ 1.39
TTC3-203ENST00000399010 RCAN3Q9UKA8 241 aa23.71■■□□□ 1.39
TTC3-203ENST00000399010 C4BP0C0L5 1744 aa23.7■■□□□ 1.39
TTC3-203ENST00000399010 RARSP54136 660 aaKnown RBP23.7■■□□□ 1.38
TTC3-203ENST00000399010 SSH1Q8WYL5 1049 aa23.7■■□□□ 1.38
TTC3-203ENST00000399010 UPF1Q92900 1129 aaKnown RBP eCLIP23.7■■□□□ 1.38
TTC3-203ENST00000399010 CHPF2Q9P2E5 772 aa23.7■■□□□ 1.38
TTC3-203ENST00000399010 CACNA1FO60840 1977 aa23.7■■□□□ 1.38
TTC3-203ENST00000399010 RREB1Q92766 1687 aa23.69■■□□□ 1.38
TTC3-203ENST00000399010 A1BGP04217 495 aa23.69■■□□□ 1.38
TTC3-203ENST00000399010 ANXA1P04083 346 aa23.69■■□□□ 1.38
TTC3-203ENST00000399010 CAMKK2Q96RR4 588 aa23.69■■□□□ 1.38
TTC3-203ENST00000399010 SMC4Q9NTJ3 1288 aa23.69■■□□□ 1.38
TTC3-203ENST00000399010 ZNF428Q96B54 188 aa23.68■■□□□ 1.38
TTC3-203ENST00000399010 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
TTC3-203ENST00000399010 CRKLP46109 303 aaKnown RBP23.68■■□□□ 1.38
TTC3-203ENST00000399010 PROSER3Q2NL68 480 aa23.68■■□□□ 1.38
TTC3-203ENST00000399010 BCAR3O75815 825 aa23.67■■□□□ 1.38
TTC3-203ENST00000399010 MYL6BP14649 208 aa23.67■■□□□ 1.38
TTC3-203ENST00000399010 ALDH1L2Q3SY69 923 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 CHMP4AQ9BY43 222 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 NUP188Q5SRE5 1749 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 NBPF26B4DH59 902 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 CANXP27824 592 aaKnown RBP23.66■■□□□ 1.38
TTC3-203ENST00000399010 NBPF14Q5TI25 921 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 NBPF10Q6P3W6 841 aaKnown RBP23.66■■□□□ 1.38
TTC3-203ENST00000399010 NBPF15Q8N660 670 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 CCDC87Q9NVE4 849 aa23.66■■□□□ 1.38
TTC3-203ENST00000399010 DBF4Q9UBU7 674 aaPredicted RBP23.66■■□□□ 1.38
TTC3-203ENST00000399010 SLC4A2P04920 1241 aa23.65■■□□□ 1.38
TTC3-203ENST00000399010 PDIA6Q15084 440 aa23.65■■□□□ 1.38
TTC3-203ENST00000399010 INTS5Q6P9B9 1019 aaKnown RBP23.65■■□□□ 1.38
TTC3-203ENST00000399010 ZNF330Q9Y3S2 320 aaPredicted RBP23.65■■□□□ 1.38
TTC3-203ENST00000399010 MRPL50Q8N5N7 158 aaKnown RBP23.64■■□□□ 1.37
TTC3-203ENST00000399010 DDX21Q9NR30 783 aaKnown RBP eCLIP23.64■■□□□ 1.37
TTC3-203ENST00000399010 ERBB4Q15303 1308 aa23.64■■□□□ 1.37
TTC3-203ENST00000399010 CNTNAP4Q9C0A0 1308 aa23.64■■□□□ 1.37
TTC3-203ENST00000399010 G2E3Q7L622 706 aa23.62■■□□□ 1.37
TTC3-203ENST00000399010 PHAXQ9H814 394 aaKnown RBP23.62■■□□□ 1.37
TTC3-203ENST00000399010 UBR3Q6ZT12 1888 aa23.62■■□□□ 1.37
TTC3-203ENST00000399010 GNPATO15228 680 aa23.6■■□□□ 1.37
TTC3-203ENST00000399010 AK7Q96M32 723 aa23.6■■□□□ 1.37
TTC3-203ENST00000399010 HYPKQ9NX55 129 aa23.6■■□□□ 1.37
TTC3-203ENST00000399010 TUBGCP6Q96RT7 1819 aa23.6■■□□□ 1.37
TTC3-203ENST00000399010 RC3H1Q5TC82 1133 aaKnown RBP23.6■■□□□ 1.37
TTC3-203ENST00000399010 SMIM5Q71RC9 77 aa23.59■■□□□ 1.37
TTC3-203ENST00000399010 LRP10Q7Z4F1 713 aa23.59■■□□□ 1.37
TTC3-203ENST00000399010 FRAT1Q92837 279 aaPredicted RBP23.59■■□□□ 1.37
TTC3-203ENST00000399010 AIMP1Q12904 312 aaKnown RBP23.59■■□□□ 1.37
TTC3-203ENST00000399010 IL6STP40189 918 aaPredicted RBP23.57■■□□□ 1.36
TTC3-203ENST00000399010 FLIIQ13045 1269 aa23.57■■□□□ 1.36
TTC3-203ENST00000399010 ZNF827Q17R98 1081 aa23.57■■□□□ 1.36
TTC3-203ENST00000399010 XAGE3Q8WTP9 111 aa23.57■■□□□ 1.36
TTC3-203ENST00000399010 NOB1Q9ULX3 412 aaKnown RBP23.57■■□□□ 1.36
TTC3-203ENST00000399010 AMIGO3Q86WK7 504 aa23.57■■□□□ 1.36
TTC3-203ENST00000399010 KIF16BQ96L93 1317 aa23.57■■□□□ 1.36
TTC3-203ENST00000399010 COPS6Q7L5N1 327 aa23.56■■□□□ 1.36
TTC3-203ENST00000399010 ARXQ96QS3 562 aa23.56■■□□□ 1.36
TTC3-203ENST00000399010 COL15A1P39059 1388 aa23.56■■□□□ 1.36
TTC3-203ENST00000399010 PHF14O94880 888 aa23.56■■□□□ 1.36
TTC3-203ENST00000399010 EIF5P55010 431 aaKnown RBP23.56■■□□□ 1.36
TTC3-203ENST00000399010 BRPF1P55201 1214 aaPredicted RBP23.56■■□□□ 1.36
TTC3-203ENST00000399010 NPM2Q86SE8 214 aaKnown RBP23.56■■□□□ 1.36
TTC3-203ENST00000399010 ANO8Q9HCE9 1232 aaPredicted RBP23.56■■□□□ 1.36
TTC3-203ENST00000399010 RTCBQ9Y3I0 505 aaKnown RBP23.56■■□□□ 1.36
TTC3-203ENST00000399010 SUPT16HQ9Y5B9 1047 aaKnown RBP23.56■■□□□ 1.36
TTC3-203ENST00000399010 C4AP0C0L4 1744 aa23.55■■□□□ 1.36
TTC3-203ENST00000399010 PLIN1O60240 522 aa23.55■■□□□ 1.36
TTC3-203ENST00000399010 RPS6KA4O75676 772 aa23.55■■□□□ 1.36
TTC3-203ENST00000399010 HMGB2P26583 209 aaKnown RBP23.55■■□□□ 1.36
TTC3-203ENST00000399010 AKT1S1Q96B36 256 aa23.55■■□□□ 1.36
TTC3-203ENST00000399010 FKBP5Q13451 457 aaPredicted RBP23.54■■□□□ 1.36
TTC3-203ENST00000399010 TTLL7Q6ZT98 887 aa23.54■■□□□ 1.36
TTC3-203ENST00000399010 ARFGEF2Q9Y6D5 1785 aa23.54■■□□□ 1.36
TTC3-203ENST00000399010 TFCP2L1Q9NZI6 479 aa23.53■■□□□ 1.36
TTC3-203ENST00000399010 TBC1D2BQ9UPU7 963 aa23.52■■□□□ 1.36
TTC3-203ENST00000399010 PTPRCP08575 1304 aa23.52■■□□□ 1.36
TTC3-203ENST00000399010 STK32BQ9NY57 414 aa23.51■■□□□ 1.35
TTC3-203ENST00000399010 TNNQ9UQP3 1299 aa23.51■■□□□ 1.35
TTC3-203ENST00000399010 RRP1P56182 461 aaKnown RBP23.51■■□□□ 1.35
TTC3-203ENST00000399010 ZKSCAN2Q63HK3 967 aa23.51■■□□□ 1.35
TTC3-203ENST00000399010 DZIP3Q86Y13 1208 aaKnown RBP23.51■■□□□ 1.35
TTC3-203ENST00000399010 BCORQ6W2J9 1755 aa23.51■■□□□ 1.35
TTC3-203ENST00000399010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.5■■□□□ 1.35
TTC3-203ENST00000399010 KIF6Q6ZMV9 814 aa23.5■■□□□ 1.35
TTC3-203ENST00000399010 ZBTB3Q9H5J0 574 aa23.5■■□□□ 1.35
TTC3-203ENST00000399010 IPO8O15397 1037 aaKnown RBP23.5■■□□□ 1.35
TTC3-203ENST00000399010 NUP98P52948 1817 aa23.49■■□□□ 1.35
TTC3-203ENST00000399010 F6X3S4 739 aa23.49■■□□□ 1.35
TTC3-203ENST00000399010 DDX58O95786 925 aaKnown RBP23.49■■□□□ 1.35
TTC3-203ENST00000399010 TRIM27P14373 513 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms