RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 TBC1D9Q6ZT07 1266 aa31.9■■■□□ 2.7
SHARPIN-202ENST00000398712 PRAMEF22A3QJZ6 481 aa31.89■■■□□ 2.7
SHARPIN-202ENST00000398712 SLC39A6Q13433 755 aa31.89■■■□□ 2.7
SHARPIN-202ENST00000398712 KSR2Q6VAB6 950 aa31.89■■■□□ 2.7
SHARPIN-202ENST00000398712 ALDH1L1O75891 902 aa31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 DDX58O95786 925 aaKnown RBP31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 PROSER3Q2NL68 480 aa31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 TTC5Q8N0Z6 440 aa31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 LRRCC1Q9C099 1032 aa31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 EXOC6BQ9Y2D4 811 aa31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 IBTKQ9P2D0 1353 aaPredicted RBP31.88■■■□□ 2.69
SHARPIN-202ENST00000398712 RBM25P49756 843 aaKnown RBP31.87■■■□□ 2.69
SHARPIN-202ENST00000398712 OTUD7AQ8TE49 926 aaPredicted RBP31.87■■■□□ 2.69
SHARPIN-202ENST00000398712 PCDH11XQ9BZA7 1347 aa31.87■■■□□ 2.69
SHARPIN-202ENST00000398712 PCDH11YQ9BZA8 1340 aa31.87■■■□□ 2.69
SHARPIN-202ENST00000398712 SSH3Q8TE77 659 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 MAP3K2Q9Y2U5 619 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 CABP4P57796 275 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 CERKQ8TCT0 537 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 CARD10Q9BWT7 1032 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 BCL11AQ9H165 835 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 OSBPL3Q9H4L5 887 aa31.86■■■□□ 2.69
SHARPIN-202ENST00000398712 ZCRB1Q8TBF4 217 aaKnown RBP31.84■■■□□ 2.69
SHARPIN-202ENST00000398712 HDAC5Q9UQL6 1122 aa31.84■■■□□ 2.69
SHARPIN-202ENST00000398712 SNRPA1P09661 255 aaKnown RBP31.83■■■□□ 2.69
SHARPIN-202ENST00000398712 RTL5Q5HYW3 569 aaPredicted RBP31.83■■■□□ 2.69
SHARPIN-202ENST00000398712 FMNL2Q96PY5 1086 aa31.83■■■□□ 2.69
SHARPIN-202ENST00000398712 NBPF7P0C2Y1 421 aaPredicted RBP31.82■■■□□ 2.68
SHARPIN-202ENST00000398712 POLA2Q14181 598 aa31.82■■■□□ 2.68
SHARPIN-202ENST00000398712 PDIA6Q15084 440 aa31.82■■■□□ 2.68
SHARPIN-202ENST00000398712 ZNF496Q96IT1 587 aaPredicted RBP31.82■■■□□ 2.68
SHARPIN-202ENST00000398712 IL2RBP14784 551 aa31.81■■■□□ 2.68
SHARPIN-202ENST00000398712 PPP1R42Q7Z4L9 355 aa31.81■■■□□ 2.68
SHARPIN-202ENST00000398712 RAB11FIP3O75154 756 aa31.8■■■□□ 2.68
SHARPIN-202ENST00000398712 PDE1AP54750 535 aa31.8■■■□□ 2.68
SHARPIN-202ENST00000398712 TBC1D2Q9BYX2 928 aa31.8■■■□□ 2.68
SHARPIN-202ENST00000398712 EVA1CP58658 441 aa31.79■■■□□ 2.68
SHARPIN-202ENST00000398712 CASC1Q6TDU7 716 aa31.79■■■□□ 2.68
SHARPIN-202ENST00000398712 LINS1Q8NG48 757 aa31.79■■■□□ 2.68
SHARPIN-202ENST00000398712 USP35Q9P2H5 1018 aa31.79■■■□□ 2.68
SHARPIN-202ENST00000398712 LAMB4A4D0S4 1761 aa31.78■■■□□ 2.68
SHARPIN-202ENST00000398712 SDSP20132 328 aa31.78■■■□□ 2.68
SHARPIN-202ENST00000398712 C9orf78Q9NZ63 289 aaPredicted RBP31.78■■■□□ 2.68
SHARPIN-202ENST00000398712 SALL3Q9BXA9 1300 aa31.77■■■□□ 2.68
SHARPIN-202ENST00000398712 ERVV-2B6SEH9 535 aa31.76■■■□□ 2.68
SHARPIN-202ENST00000398712 SRGAP3O43295 1099 aa31.76■■■□□ 2.68
SHARPIN-202ENST00000398712 STRN4Q9NRL3 753 aa31.76■■■□□ 2.68
SHARPIN-202ENST00000398712 AIMP1Q12904 312 aaKnown RBP31.75■■■□□ 2.67
SHARPIN-202ENST00000398712 NKX1-1Q15270 411 aaPredicted RBP31.75■■■□□ 2.67
SHARPIN-202ENST00000398712 LARP1Q6PKG0 1096 aaKnown RBP31.75■■■□□ 2.67
SHARPIN-202ENST00000398712 SHANK3Q9BYB0 1731 aa31.75■■■□□ 2.67
SHARPIN-202ENST00000398712 MTX1Q13505 466 aa31.74■■■□□ 2.67
SHARPIN-202ENST00000398712 HSP90AB4PQ58FF6 505 aa31.74■■■□□ 2.67
SHARPIN-202ENST00000398712 SURF6O75683 361 aaKnown RBP31.73■■■□□ 2.67
SHARPIN-202ENST00000398712 MX1P20591 662 aa31.73■■■□□ 2.67
SHARPIN-202ENST00000398712 RIC3Q7Z5B4 369 aa31.73■■■□□ 2.67
SHARPIN-202ENST00000398712 MYL6BP14649 208 aa31.72■■■□□ 2.67
SHARPIN-202ENST00000398712 GLI3P10071 1580 aa31.72■■■□□ 2.67
SHARPIN-202ENST00000398712 TUBGCP6Q96RT7 1819 aa31.72■■■□□ 2.67
SHARPIN-202ENST00000398712 NEXNQ0ZGT2 675 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 CWF19L2Q2TBE0 894 aaKnown RBP31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 STAP2Q9UGK3 403 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 USP16Q9Y5T5 823 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 ROBO1Q9Y6N7 1651 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 UTYO14607 1347 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 AOX1Q06278 1338 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 UBR2Q8IWV8 1755 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 XAGE3Q8WTP9 111 aa31.71■■■□□ 2.67
SHARPIN-202ENST00000398712 GRM8O00222 908 aa31.7■■■□□ 2.67
SHARPIN-202ENST00000398712 HSCBQ8IWL3 235 aa31.7■■■□□ 2.67
SHARPIN-202ENST00000398712 PAPPAQ13219 1627 aa31.7■■■□□ 2.66
SHARPIN-202ENST00000398712 KIF1BPQ96EK5 621 aa31.69■■■□□ 2.66
SHARPIN-202ENST00000398712 AHDC1Q5TGY3 1603 aaPredicted RBP31.69■■■□□ 2.66
SHARPIN-202ENST00000398712 COL14A1Q05707 1796 aaKnown RBP31.69■■■□□ 2.66
SHARPIN-202ENST00000398712 COPS6Q7L5N1 327 aa31.68■■■□□ 2.66
SHARPIN-202ENST00000398712 ERBB4Q15303 1308 aa31.68■■■□□ 2.66
SHARPIN-202ENST00000398712 SNX21Q969T3 373 aa31.68■■■□□ 2.66
SHARPIN-202ENST00000398712 RHPN1Q8TCX5 695 aa31.67■■■□□ 2.66
SHARPIN-202ENST00000398712 LRP10Q7Z4F1 713 aa31.66■■■□□ 2.66
SHARPIN-202ENST00000398712 METTL22Q9BUU2 404 aaPredicted RBP31.66■■■□□ 2.66
SHARPIN-202ENST00000398712 COL22A1Q8NFW1 1626 aaPredicted RBP31.66■■■□□ 2.66
SHARPIN-202ENST00000398712 DDX54Q8TDD1 881 aaKnown RBP31.66■■■□□ 2.66
SHARPIN-202ENST00000398712 ANKRD13DQ6ZTN6 518 aa31.65■■■□□ 2.66
SHARPIN-202ENST00000398712 IGKV5-2P06315 115 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 NFKBIBQ15653 356 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 KIF2CQ99661 725 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 IL1RAPL2Q9NP60 686 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 NEURL1BA8MQ27 555 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 REC8O95072 547 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 BTG4Q9NY30 223 aa31.63■■■□□ 2.65
SHARPIN-202ENST00000398712 SLKQ9H2G2 1235 aaPredicted RBP31.62■■■□□ 2.65
SHARPIN-202ENST00000398712 KCPQ6ZWJ8 1503 aa31.62■■■□□ 2.65
SHARPIN-202ENST00000398712 ARFGEF2Q9Y6D5 1785 aa31.62■■■□□ 2.65
SHARPIN-202ENST00000398712 ANTXR1Q9H6X2 564 aa31.61■■■□□ 2.65
SHARPIN-202ENST00000398712 ERC2O15083 957 aa31.61■■■□□ 2.65
SHARPIN-202ENST00000398712 OS9Q13438 667 aaPredicted RBP31.61■■■□□ 2.65
SHARPIN-202ENST00000398712 TSHZ3Q63HK5 1081 aa31.61■■■□□ 2.65
SHARPIN-202ENST00000398712 SUCLG2Q96I99 432 aa31.61■■■□□ 2.65
SHARPIN-202ENST00000398712 MYD88Q99836 296 aa31.61■■■□□ 2.65
SHARPIN-202ENST00000398712 USP26Q9BXU7 913 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms