RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 IBTKQ9P2D0 1353 aaPredicted RBP18.93■□□□□ 0.62
MBD1-209ENST00000398495 RBM25P49756 843 aaKnown RBP18.93■□□□□ 0.62
MBD1-209ENST00000398495 DCAF5Q96JK2 942 aa18.92■□□□□ 0.62
MBD1-209ENST00000398495 TUBGCP6Q96RT7 1819 aa18.92■□□□□ 0.62
MBD1-209ENST00000398495 GLI3P10071 1580 aa18.92■□□□□ 0.62
MBD1-209ENST00000398495 NBPF7P0C2Y1 421 aaPredicted RBP18.92■□□□□ 0.62
MBD1-209ENST00000398495 RTL5Q5HYW3 569 aaPredicted RBP18.92■□□□□ 0.62
MBD1-209ENST00000398495 MAP3K2Q9Y2U5 619 aa18.92■□□□□ 0.62
MBD1-209ENST00000398495 PDIA6Q15084 440 aa18.91■□□□□ 0.62
MBD1-209ENST00000398495 LRRCC1Q9C099 1032 aa18.91■□□□□ 0.62
MBD1-209ENST00000398495 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
MBD1-209ENST00000398495 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
MBD1-209ENST00000398495 SALL3Q9BXA9 1300 aa18.9■□□□□ 0.62
MBD1-209ENST00000398495 SHANK3Q9BYB0 1731 aa18.9■□□□□ 0.62
MBD1-209ENST00000398495 SDSP20132 328 aa18.9■□□□□ 0.62
MBD1-209ENST00000398495 KSR2Q6VAB6 950 aa18.9■□□□□ 0.62
MBD1-209ENST00000398495 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
MBD1-209ENST00000398495 DDX21Q9NR30 783 aaKnown RBP eCLIP18.9■□□□□ 0.62
MBD1-209ENST00000398495 PDE1AP54750 535 aa18.89■□□□□ 0.62
MBD1-209ENST00000398495 POLA2Q14181 598 aa18.89■□□□□ 0.62
MBD1-209ENST00000398495 PPP1R42Q7Z4L9 355 aa18.89■□□□□ 0.62
MBD1-209ENST00000398495 ZNF496Q96IT1 587 aaPredicted RBP18.89■□□□□ 0.62
MBD1-209ENST00000398495 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
MBD1-209ENST00000398495 OSBPL3Q9H4L5 887 aa18.88■□□□□ 0.61
MBD1-209ENST00000398495 LAMB4A4D0S4 1761 aa18.88■□□□□ 0.61
MBD1-209ENST00000398495 ALDH1L1O75891 902 aa18.87■□□□□ 0.61
MBD1-209ENST00000398495 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
MBD1-209ENST00000398495 TSHZ3Q63HK5 1081 aa18.87■□□□□ 0.61
MBD1-209ENST00000398495 SLKQ9H2G2 1235 aaPredicted RBP18.87■□□□□ 0.61
MBD1-209ENST00000398495 NFKBIBQ15653 356 aa18.86■□□□□ 0.61
MBD1-209ENST00000398495 CWF19L2Q2TBE0 894 aaKnown RBP18.86■□□□□ 0.61
MBD1-209ENST00000398495 CABP4P57796 275 aa18.86■□□□□ 0.61
MBD1-209ENST00000398495 TTC5Q8N0Z6 440 aa18.86■□□□□ 0.61
MBD1-209ENST00000398495 KIF2CQ99661 725 aa18.86■□□□□ 0.61
MBD1-209ENST00000398495 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
MBD1-209ENST00000398495 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
MBD1-209ENST00000398495 SRGAP3O43295 1099 aa18.85■□□□□ 0.61
MBD1-209ENST00000398495 ZCRB1Q8TBF4 217 aaKnown RBP18.85■□□□□ 0.61
MBD1-209ENST00000398495 MYL6BP14649 208 aa18.85■□□□□ 0.61
MBD1-209ENST00000398495 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
MBD1-209ENST00000398495 STRN4Q9NRL3 753 aa18.85■□□□□ 0.61
MBD1-209ENST00000398495 PAPPAQ13219 1627 aa18.84■□□□□ 0.61
MBD1-209ENST00000398495 DDX58O95786 925 aaKnown RBP18.84■□□□□ 0.61
MBD1-209ENST00000398495 MX1P20591 662 aa18.84■□□□□ 0.61
MBD1-209ENST00000398495 LARP1Q6PKG0 1096 aaKnown RBP18.84■□□□□ 0.61
MBD1-209ENST00000398495 FMNL2Q96PY5 1086 aa18.84■□□□□ 0.61
MBD1-209ENST00000398495 CARD10Q9BWT7 1032 aa18.84■□□□□ 0.61
MBD1-209ENST00000398495 USP35Q9P2H5 1018 aa18.84■□□□□ 0.61
MBD1-209ENST00000398495 SNRPA1P09661 255 aaKnown RBP18.83■□□□□ 0.61
MBD1-209ENST00000398495 UBR2Q8IWV8 1755 aa18.83■□□□□ 0.61
MBD1-209ENST00000398495 USP16Q9Y5T5 823 aa18.83■□□□□ 0.61
MBD1-209ENST00000398495 SURF6O75683 361 aaKnown RBP18.83■□□□□ 0.6
MBD1-209ENST00000398495 LINS1Q8NG48 757 aa18.83■□□□□ 0.6
MBD1-209ENST00000398495 XAGE3Q8WTP9 111 aa18.83■□□□□ 0.6
MBD1-209ENST00000398495 IL1RAPL2Q9NP60 686 aa18.83■□□□□ 0.6
MBD1-209ENST00000398495 RAB11FIP3O75154 756 aa18.82■□□□□ 0.6
MBD1-209ENST00000398495 PIP4K2AP48426 406 aaPredicted RBP18.82■□□□□ 0.6
MBD1-209ENST00000398495 HSCBQ8IWL3 235 aa18.82■□□□□ 0.6
MBD1-209ENST00000398495 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
MBD1-209ENST00000398495 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
MBD1-209ENST00000398495 IL2RBP14784 551 aa18.82■□□□□ 0.6
MBD1-209ENST00000398495 LRP10Q7Z4F1 713 aa18.82■□□□□ 0.6
MBD1-209ENST00000398495 STAP2Q9UGK3 403 aa18.82■□□□□ 0.6
MBD1-209ENST00000398495 MTX1Q13505 466 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 TOGARAM1Q9Y4F4 1720 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 ROBO1Q9Y6N7 1651 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 RIC3Q7Z5B4 369 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 RHPN1Q8TCX5 695 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 ARFGEF2Q9Y6D5 1785 aa18.81■□□□□ 0.6
MBD1-209ENST00000398495 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
MBD1-209ENST00000398495 CASC1Q6TDU7 716 aa18.8■□□□□ 0.6
MBD1-209ENST00000398495 COPS6Q7L5N1 327 aa18.8■□□□□ 0.6
MBD1-209ENST00000398495 SNX21Q969T3 373 aa18.8■□□□□ 0.6
MBD1-209ENST00000398495 UTYO14607 1347 aa18.8■□□□□ 0.6
MBD1-209ENST00000398495 GRM8O00222 908 aa18.79■□□□□ 0.6
MBD1-209ENST00000398495 EVA1CP58658 441 aa18.79■□□□□ 0.6
MBD1-209ENST00000398495 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
MBD1-209ENST00000398495 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
MBD1-209ENST00000398495 USP26Q9BXU7 913 aa18.79■□□□□ 0.6
MBD1-209ENST00000398495 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
MBD1-209ENST00000398495 AOX1Q06278 1338 aa18.79■□□□□ 0.6
MBD1-209ENST00000398495 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
MBD1-209ENST00000398495 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
MBD1-209ENST00000398495 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
MBD1-209ENST00000398495 KAZALD1Q96I82 304 aa18.78■□□□□ 0.6
MBD1-209ENST00000398495 NKX1-1Q15270 411 aaPredicted RBP18.78■□□□□ 0.6
MBD1-209ENST00000398495 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
MBD1-209ENST00000398495 KIF1BPQ96EK5 621 aa18.78■□□□□ 0.6
MBD1-209ENST00000398495 MYD88Q99836 296 aa18.78■□□□□ 0.6
MBD1-209ENST00000398495 ERVV-2B6SEH9 535 aa18.77■□□□□ 0.6
MBD1-209ENST00000398495 CD2BP2O95400 341 aaKnown RBP18.77■□□□□ 0.6
MBD1-209ENST00000398495 METTL22Q9BUU2 404 aaPredicted RBP18.77■□□□□ 0.6
MBD1-209ENST00000398495 COL14A1Q05707 1796 aaKnown RBP18.77■□□□□ 0.59
MBD1-209ENST00000398495 NEURL1BA8MQ27 555 aa18.76■□□□□ 0.59
MBD1-209ENST00000398495 DEKP35659 375 aaKnown RBP18.76■□□□□ 0.59
MBD1-209ENST00000398495 COL16A1Q07092 1604 aaPredicted RBP18.76■□□□□ 0.59
MBD1-209ENST00000398495 AHDC1Q5TGY3 1603 aaPredicted RBP18.76■□□□□ 0.59
MBD1-209ENST00000398495 BICC1Q9H694 974 aaKnown RBP18.76■□□□□ 0.59
MBD1-209ENST00000398495 PA2G4Q9UQ80 394 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms