RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SRP68Q9UHB9 627 aaKnown RBP33.53■■■□□ 2.96
U2AF1-203ENST00000398137 NFE2L2Q16236 605 aa33.52■■■□□ 2.96
U2AF1-203ENST00000398137 CEMIPQ8WUJ3 1361 aa33.51■■■□□ 2.96
U2AF1-203ENST00000398137 USP42Q9H9J4 1324 aaKnown RBP33.51■■■□□ 2.95
U2AF1-203ENST00000398137 CCDC87Q9NVE4 849 aa33.5■■■□□ 2.95
U2AF1-203ENST00000398137 SOS1Q07889 1333 aaPredicted RBP33.49■■■□□ 2.95
U2AF1-203ENST00000398137 DLG5Q8TDM6 1919 aa33.48■■■□□ 2.95
U2AF1-203ENST00000398137 C10orf71Q711Q0 1435 aa33.48■■■□□ 2.95
U2AF1-203ENST00000398137 N4BP2Q86UW6 1770 aaPredicted RBP33.48■■■□□ 2.95
U2AF1-203ENST00000398137 RRP7AQ9Y3A4 280 aaKnown RBP33.48■■■□□ 2.95
U2AF1-203ENST00000398137 PXDNLA1KZ92 1463 aa33.48■■■□□ 2.95
U2AF1-203ENST00000398137 GRIN3BO60391 1043 aa33.47■■■□□ 2.95
U2AF1-203ENST00000398137 VSIG10Q8N0Z9 540 aa33.47■■■□□ 2.95
U2AF1-203ENST00000398137 WWC3Q9ULE0 1092 aa33.47■■■□□ 2.95
U2AF1-203ENST00000398137 TMPOP42166 694 aaKnown RBP33.46■■■□□ 2.95
U2AF1-203ENST00000398137 FKBP8Q14318 412 aa33.46■■■□□ 2.95
U2AF1-203ENST00000398137 ZBTB1Q9Y2K1 713 aa33.46■■■□□ 2.95
U2AF1-203ENST00000398137 ZNF496Q96IT1 587 aaPredicted RBP33.45■■■□□ 2.95
U2AF1-203ENST00000398137 APAF1O14727 1248 aa33.44■■■□□ 2.94
U2AF1-203ENST00000398137 ZNF790Q6PG37 636 aa33.44■■■□□ 2.94
U2AF1-203ENST00000398137 DDR1Q08345 913 aa33.43■■■□□ 2.94
U2AF1-203ENST00000398137 TEFQ10587 303 aa33.43■■■□□ 2.94
U2AF1-203ENST00000398137 NEUROD2Q15784 382 aa33.43■■■□□ 2.94
U2AF1-203ENST00000398137 RTF1Q92541 710 aaKnown RBP33.43■■■□□ 2.94
U2AF1-203ENST00000398137 RIPK4P57078 832 aa33.42■■■□□ 2.94
U2AF1-203ENST00000398137 MCM10Q7L590 875 aa33.42■■■□□ 2.94
U2AF1-203ENST00000398137 SENP3-EIF4A1A0A087X0R7 540 aa33.41■■■□□ 2.94
U2AF1-203ENST00000398137 DCTN1Q14203 1278 aa33.41■■■□□ 2.94
U2AF1-203ENST00000398137 BRCA1P38398 1863 aaKnown RBP33.4■■■□□ 2.94
U2AF1-203ENST00000398137 HEG1Q9ULI3 1381 aa33.4■■■□□ 2.94
U2AF1-203ENST00000398137 KCNQ3O43525 872 aa33.4■■■□□ 2.94
U2AF1-203ENST00000398137 COL15A1P39059 1388 aa33.39■■■□□ 2.94
U2AF1-203ENST00000398137 HTATSF1O43719 755 aaKnown RBP33.39■■■□□ 2.94
U2AF1-203ENST00000398137 TTC5Q8N0Z6 440 aa33.39■■■□□ 2.94
U2AF1-203ENST00000398137 TM4SF1P30408 202 aa33.38■■■□□ 2.93
U2AF1-203ENST00000398137 USPL1Q5W0Q7 1092 aa33.38■■■□□ 2.93
U2AF1-203ENST00000398137 PARP3Q9Y6F1 533 aa33.38■■■□□ 2.93
U2AF1-203ENST00000398137 TGFB2P61812 414 aa33.37■■■□□ 2.93
U2AF1-203ENST00000398137 BCL2L12Q9HB09 334 aa33.37■■■□□ 2.93
U2AF1-203ENST00000398137 A0A0G2JLW4 131 aa33.36■■■□□ 2.93
U2AF1-203ENST00000398137 THUMPD2Q9BTF0 503 aaKnown RBP33.36■■■□□ 2.93
U2AF1-203ENST00000398137 LMOD3Q0VAK6 560 aa33.35■■■□□ 2.93
U2AF1-203ENST00000398137 NARFQ9UHQ1 456 aa33.35■■■□□ 2.93
U2AF1-203ENST00000398137 POLRMTO00411 1230 aaKnown RBP33.34■■■□□ 2.93
U2AF1-203ENST00000398137 AFDNP55196 1824 aaKnown RBP33.33■■■□□ 2.93
U2AF1-203ENST00000398137 DPEP1P16444 411 aa33.33■■■□□ 2.93
U2AF1-203ENST00000398137 KCNA3P22001 575 aa33.33■■■□□ 2.93
U2AF1-203ENST00000398137 CANXP27824 592 aaKnown RBP33.33■■■□□ 2.93
U2AF1-203ENST00000398137 EIF5P55010 431 aaKnown RBP33.33■■■□□ 2.93
U2AF1-203ENST00000398137 BTBD11A6QL63 1104 aa33.32■■■□□ 2.92
U2AF1-203ENST00000398137 ZPR1O75312 459 aa33.32■■■□□ 2.92
U2AF1-203ENST00000398137 NRXN2Q9P2S2 1712 aa33.32■■■□□ 2.92
U2AF1-203ENST00000398137 TRIM35Q9UPQ4 493 aa33.32■■■□□ 2.92
U2AF1-203ENST00000398137 STARD3NLO95772 234 aa33.31■■■□□ 2.92
U2AF1-203ENST00000398137 FMNL2Q96PY5 1086 aa33.3■■■□□ 2.92
U2AF1-203ENST00000398137 ADCY9O60503 1353 aa33.3■■■□□ 2.92
U2AF1-203ENST00000398137 NFIXQ14938 502 aa33.29■■■□□ 2.92
U2AF1-203ENST00000398137 TEX13AQ9BXU3 409 aaPredicted RBP33.27■■■□□ 2.92
U2AF1-203ENST00000398137 SCN7AQ01118 1682 aa33.26■■■□□ 2.92
U2AF1-203ENST00000398137 PRAMEF22A3QJZ6 481 aa33.26■■■□□ 2.91
U2AF1-203ENST00000398137 A1BGP04217 495 aa33.26■■■□□ 2.91
U2AF1-203ENST00000398137 SALL2Q9Y467 1007 aaPredicted RBP33.25■■■□□ 2.91
U2AF1-203ENST00000398137 ATP10DQ9P241 1426 aa33.25■■■□□ 2.91
U2AF1-203ENST00000398137 BCS1LQ9Y276 419 aa33.24■■■□□ 2.91
U2AF1-203ENST00000398137 USP16Q9Y5T5 823 aa33.24■■■□□ 2.91
U2AF1-203ENST00000398137 ARFGEF1Q9Y6D6 1849 aa33.23■■■□□ 2.91
U2AF1-203ENST00000398137 IL6STP40189 918 aaPredicted RBP33.21■■■□□ 2.91
U2AF1-203ENST00000398137 CHRNA5P30532 468 aa33.2■■■□□ 2.91
U2AF1-203ENST00000398137 TAF7Q15545 349 aaPredicted RBP33.2■■■□□ 2.91
U2AF1-203ENST00000398137 KDM3BQ7LBC6 1761 aa33.19■■■□□ 2.9
U2AF1-203ENST00000398137 CCDC27Q2M243 656 aa33.19■■■□□ 2.9
U2AF1-203ENST00000398137 TBC1D2BQ9UPU7 963 aa33.19■■■□□ 2.9
U2AF1-203ENST00000398137 BCORQ6W2J9 1755 aa33.19■■■□□ 2.9
U2AF1-203ENST00000398137 PIP4K2AP48426 406 aaPredicted RBP33.18■■■□□ 2.9
U2AF1-203ENST00000398137 MIS18AQ9NYP9 233 aa33.18■■■□□ 2.9
U2AF1-203ENST00000398137 A0A087WZG4 1122 aa33.17■■■□□ 2.9
U2AF1-203ENST00000398137 SERPINB2P05120 415 aa33.17■■■□□ 2.9
U2AF1-203ENST00000398137 WWC1Q8IX03 1113 aa33.17■■■□□ 2.9
U2AF1-203ENST00000398137 CARMIL3Q8ND23 1372 aa33.17■■■□□ 2.9
U2AF1-203ENST00000398137 NCBP3Q53F19 620 aaKnown RBP33.16■■■□□ 2.9
U2AF1-203ENST00000398137 TBC1D9BQ66K14 1250 aa33.16■■■□□ 2.9
U2AF1-203ENST00000398137 ZNF330Q9Y3S2 320 aaPredicted RBP33.16■■■□□ 2.9
U2AF1-203ENST00000398137 DLEC1Q9Y238 1755 aa33.16■■■□□ 2.9
U2AF1-203ENST00000398137 SNRPA1P09661 255 aaKnown RBP33.15■■■□□ 2.9
U2AF1-203ENST00000398137 PIM2Q9P1W9 311 aa33.15■■■□□ 2.9
U2AF1-203ENST00000398137 ANKRD31Q8N7Z5 1873 aa33.14■■■□□ 2.9
U2AF1-203ENST00000398137 CAMTA2O94983 1202 aa33.14■■■□□ 2.9
U2AF1-203ENST00000398137 C1QTNF8P60827 252 aa33.14■■■□□ 2.9
U2AF1-203ENST00000398137 BICDL1Q6ZP65 573 aa33.14■■■□□ 2.9
U2AF1-203ENST00000398137 LAS1LQ9Y4W2 734 aaKnown RBP33.14■■■□□ 2.9
U2AF1-203ENST00000398137 CALD1Q05682 793 aaKnown RBP33.12■■■□□ 2.89
U2AF1-203ENST00000398137 NGEFQ8N5V2 710 aa33.12■■■□□ 2.89
U2AF1-203ENST00000398137 TSPYL4Q9UJ04 414 aa33.12■■■□□ 2.89
U2AF1-203ENST00000398137 LAMB4A4D0S4 1761 aa33.11■■■□□ 2.89
U2AF1-203ENST00000398137 NBPF26B4DH59 902 aa33.11■■■□□ 2.89
U2AF1-203ENST00000398137 GIGYF1O75420 1035 aaPredicted RBP33.11■■■□□ 2.89
U2AF1-203ENST00000398137 NBPF10Q6P3W6 841 aaKnown RBP33.11■■■□□ 2.89
U2AF1-203ENST00000398137 NBPF15Q8N660 670 aa33.11■■■□□ 2.89
U2AF1-203ENST00000398137 ARHGAP27Q6ZUM4 889 aa33.1■■■□□ 2.89
U2AF1-203ENST00000398137 DALRD3Q5D0E6 543 aaKnown RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms