RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 PRR36Q9H6K5 1346 aa20.85■□□□□ 0.93
EWSR1-206ENST00000397938 STX6O43752 255 aa20.85■□□□□ 0.93
EWSR1-206ENST00000397938 DMTNQ08495 405 aa20.85■□□□□ 0.93
EWSR1-206ENST00000397938 RIMS1Q86UR5 1692 aaKnown RBP20.84■□□□□ 0.93
EWSR1-206ENST00000397938 F13A1P00488 732 aa20.84■□□□□ 0.93
EWSR1-206ENST00000397938 TTC21BQ7Z4L5 1316 aa20.84■□□□□ 0.93
EWSR1-206ENST00000397938 FOXO3O43524 673 aa20.84■□□□□ 0.93
EWSR1-206ENST00000397938 SYT1P21579 422 aa20.84■□□□□ 0.93
EWSR1-206ENST00000397938 RTF1Q92541 710 aaKnown RBP20.84■□□□□ 0.93
EWSR1-206ENST00000397938 SNX14Q9Y5W7 946 aa20.84■□□□□ 0.93
EWSR1-206ENST00000397938 LRRFIP2Q9Y608 721 aaKnown RBP20.84■□□□□ 0.93
EWSR1-206ENST00000397938 AK2P54819 239 aa20.83■□□□□ 0.92
EWSR1-206ENST00000397938 MTHFSDQ2M296 383 aaKnown RBP20.83■□□□□ 0.92
EWSR1-206ENST00000397938 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.83■□□□□ 0.92
EWSR1-206ENST00000397938 ATP6V1DQ9Y5K8 247 aa20.83■□□□□ 0.92
EWSR1-206ENST00000397938 TECPR2O15040 1411 aa20.83■□□□□ 0.92
EWSR1-206ENST00000397938 SOS1Q07889 1333 aaPredicted RBP20.83■□□□□ 0.92
EWSR1-206ENST00000397938 SGSM2O43147 1006 aa20.82■□□□□ 0.92
EWSR1-206ENST00000397938 ZSCAN20P17040 1043 aaPredicted RBP20.82■□□□□ 0.92
EWSR1-206ENST00000397938 MAP3K19Q56UN5 1328 aa20.82■□□□□ 0.92
EWSR1-206ENST00000397938 FIBPO43427 364 aa20.82■□□□□ 0.92
EWSR1-206ENST00000397938 LIMCH1Q9UPQ0 1083 aa20.82■□□□□ 0.92
EWSR1-206ENST00000397938 RUFY3Q7L099 469 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 KIAA1524Q8TCG1 905 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 IL1RAPL2Q9NP60 686 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 PXDNLA1KZ92 1463 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 SIRT1Q96EB6 747 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 FMN2Q9NZ56 1722 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 AP5Z1O43299 807 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 TPRNQ4KMQ1 711 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 GIMAP6Q6P9H5 292 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 LSG1Q9H089 658 aaKnown RBP20.81■□□□□ 0.92
EWSR1-206ENST00000397938 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
EWSR1-206ENST00000397938 LRRC37A3O60309 1634 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 CACNA1FO60840 1977 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 TPM3P06753 285 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 CCDC30Q5VVM6 783 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 NUTM1Q86Y26 1132 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 KCNF1Q9H3M0 494 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 PI4K2BQ8TCG2 481 aa20.8■□□□□ 0.92
EWSR1-206ENST00000397938 RASEFQ8IZ41 740 aa20.79■□□□□ 0.92
EWSR1-206ENST00000397938 SSH3Q8TE77 659 aa20.79■□□□□ 0.92
EWSR1-206ENST00000397938 USP31Q70CQ4 1352 aa20.79■□□□□ 0.92
EWSR1-206ENST00000397938 PYCARDQ9ULZ3 195 aa20.79■□□□□ 0.92
EWSR1-206ENST00000397938 TOPAZ1Q8N9V7 1692 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 RAB11FIP3O75154 756 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 PPP4R3BQ5MIZ7 849 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 DIAPH3Q9NSV4 1193 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 MAP4K4O95819 1239 aaPredicted RBP20.78■□□□□ 0.92
EWSR1-206ENST00000397938 PLCB2Q00722 1185 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 USP44Q9H0E7 712 aa20.78■□□□□ 0.92
EWSR1-206ENST00000397938 CRYBG1Q9Y4K1 1723 aa20.77■□□□□ 0.92
EWSR1-206ENST00000397938 KDRP35968 1356 aa20.77■□□□□ 0.92
EWSR1-206ENST00000397938 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
EWSR1-206ENST00000397938 LARP6Q9BRS8 491 aaKnown RBP20.77■□□□□ 0.92
EWSR1-206ENST00000397938 CBX1P83916 185 aa20.76■□□□□ 0.91
EWSR1-206ENST00000397938 ZHX1Q9UKY1 873 aaPredicted RBP20.76■□□□□ 0.91
EWSR1-206ENST00000397938 DNM1Q05193 864 aaKnown RBP20.76■□□□□ 0.91
EWSR1-206ENST00000397938 CHAF1AQ13111 956 aaPredicted RBP20.76■□□□□ 0.91
EWSR1-206ENST00000397938 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
EWSR1-206ENST00000397938 MTMR6Q9Y217 621 aa20.76■□□□□ 0.91
EWSR1-206ENST00000397938 LARGE1O95461 756 aa20.75■□□□□ 0.91
EWSR1-206ENST00000397938 USP6P35125 1406 aa20.75■□□□□ 0.91
EWSR1-206ENST00000397938 ACEP12821 1306 aa20.75■□□□□ 0.91
EWSR1-206ENST00000397938 RIOK3O14730 519 aaKnown RBP20.75■□□□□ 0.91
EWSR1-206ENST00000397938 CNTROBQ8N137 903 aa20.75■□□□□ 0.91
EWSR1-206ENST00000397938 GOLGA6L6A8MZA4 724 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 GJB2P29033 226 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 POLA2Q14181 598 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 RHPN1Q8TCX5 695 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 HYPKQ9NX55 129 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 PDCL2Q8N4E4 241 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 NECTIN2Q92692 538 aa20.74■□□□□ 0.91
EWSR1-206ENST00000397938 GTPBP4Q9BZE4 634 aaKnown RBP20.74■□□□□ 0.91
EWSR1-206ENST00000397938 SURF6O75683 361 aaKnown RBP20.73■□□□□ 0.91
EWSR1-206ENST00000397938 CCDC192P0DO97 292 aa20.73■□□□□ 0.91
EWSR1-206ENST00000397938 CASTP20810 708 aaKnown RBP20.73■□□□□ 0.91
EWSR1-206ENST00000397938 ANKRD7Q92527 254 aa20.73■□□□□ 0.91
EWSR1-206ENST00000397938 CEP170BQ9Y4F5 1589 aaPredicted RBP20.73■□□□□ 0.91
EWSR1-206ENST00000397938 PPP1R42Q7Z4L9 355 aa20.73■□□□□ 0.91
EWSR1-206ENST00000397938 CCDC83Q8IWF9 413 aa20.73■□□□□ 0.91
EWSR1-206ENST00000397938 HTATSF1O43719 755 aaKnown RBP20.72■□□□□ 0.91
EWSR1-206ENST00000397938 SPC24Q8NBT2 197 aa20.72■□□□□ 0.91
EWSR1-206ENST00000397938 CTIFO43310 598 aaKnown RBP20.72■□□□□ 0.91
EWSR1-206ENST00000397938 CPA1P15085 419 aa20.72■□□□□ 0.91
EWSR1-206ENST00000397938 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
EWSR1-206ENST00000397938 KIF1BPQ96EK5 621 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 IGSF1Q8N6C5 1336 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 MAP3K5Q99683 1374 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 SOX12O15370 315 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 VPS53Q5VIR6 699 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 CWC27Q6UX04 472 aaKnown RBP20.71■□□□□ 0.91
EWSR1-206ENST00000397938 SPG7Q9UQ90 795 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 SBNO1A3KN83 1393 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 FLT4P35916 1363 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 PLEKHG3A1L390 1219 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 FAM200AQ8TCP9 573 aa20.71■□□□□ 0.91
EWSR1-206ENST00000397938 ZSCAN31Q96LW9 406 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms