RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
LSS-202ENST00000397728 GLRX3O76003 335 aaKnown RBP18.42■□□□□ 0.54
LSS-202ENST00000397728 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
LSS-202ENST00000397728 MX1P20591 662 aa18.41■□□□□ 0.54
LSS-202ENST00000397728 TPD52L1Q16890 204 aaPredicted RBP18.41■□□□□ 0.54
LSS-202ENST00000397728 POLD1P28340 1107 aa18.41■□□□□ 0.54
LSS-202ENST00000397728 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
LSS-202ENST00000397728 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
LSS-202ENST00000397728 USP5P45974 858 aa18.4■□□□□ 0.54
LSS-202ENST00000397728 BICD2Q8TD16 824 aa18.4■□□□□ 0.54
LSS-202ENST00000397728 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
LSS-202ENST00000397728 NUP133Q8WUM0 1156 aa18.4■□□□□ 0.54
LSS-202ENST00000397728 KSR2Q6VAB6 950 aa18.39■□□□□ 0.54
LSS-202ENST00000397728 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.54
LSS-202ENST00000397728 CTNNA3Q9UI47 895 aa18.39■□□□□ 0.54
LSS-202ENST00000397728 MAP3K12Q12852 859 aa18.39■□□□□ 0.53
LSS-202ENST00000397728 IL13P35225 146 aa18.39■□□□□ 0.53
LSS-202ENST00000397728 STK32BQ9NY57 414 aa18.39■□□□□ 0.53
LSS-202ENST00000397728 KIAA2012Q0VF49 1180 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 CRACR2BQ8N4Y2 399 aaPredicted RBP18.38■□□□□ 0.53
LSS-202ENST00000397728 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 TRAPPC3LQ5T215 181 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 UBAC1Q9BSL1 405 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 CYP46A1Q9Y6A2 500 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 ROBO2Q9HCK4 1378 aa18.38■□□□□ 0.53
LSS-202ENST00000397728 POLR3DP05423 398 aaPredicted RBP18.38■□□□□ 0.53
LSS-202ENST00000397728 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
LSS-202ENST00000397728 ZNF790Q6PG37 636 aa18.37■□□□□ 0.53
LSS-202ENST00000397728 UTP14AQ9BVJ6 771 aaKnown RBP18.37■□□□□ 0.53
LSS-202ENST00000397728 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.37■□□□□ 0.53
LSS-202ENST00000397728 LMBR1LQ6UX01 489 aa18.37■□□□□ 0.53
LSS-202ENST00000397728 STK3Q13188 491 aa18.36■□□□□ 0.53
LSS-202ENST00000397728 LGR6Q9HBX8 967 aa18.36■□□□□ 0.53
LSS-202ENST00000397728 MPHOSPH10O00566 681 aaKnown RBP18.36■□□□□ 0.53
LSS-202ENST00000397728 APBA3O96018 575 aa18.36■□□□□ 0.53
LSS-202ENST00000397728 TSPYL6Q8N831 410 aa18.36■□□□□ 0.53
LSS-202ENST00000397728 CCDC69A6NI79 296 aa18.36■□□□□ 0.53
LSS-202ENST00000397728 DDX11L8A8MPP1 907 aa18.36■□□□□ 0.53
LSS-202ENST00000397728 CCDC47Q96A33 483 aaKnown RBP18.36■□□□□ 0.53
LSS-202ENST00000397728 TTLL12Q14166 644 aaPredicted RBP18.35■□□□□ 0.53
LSS-202ENST00000397728 MEIS3Q99687 375 aa18.35■□□□□ 0.53
LSS-202ENST00000397728 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
LSS-202ENST00000397728 CLASP1Q7Z460 1538 aa18.35■□□□□ 0.53
LSS-202ENST00000397728 PTPRTO14522 1441 aa18.35■□□□□ 0.53
LSS-202ENST00000397728 GRM8O00222 908 aa18.35■□□□□ 0.53
LSS-202ENST00000397728 BLOC1S2Q6QNY1 142 aa18.34■□□□□ 0.53
LSS-202ENST00000397728 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
LSS-202ENST00000397728 BECN2A8MW95 431 aa18.33■□□□□ 0.53
LSS-202ENST00000397728 PAXIP1Q6ZW49 1069 aaPredicted RBP18.33■□□□□ 0.53
LSS-202ENST00000397728 LINS1Q8NG48 757 aa18.33■□□□□ 0.53
LSS-202ENST00000397728 NAPBQ9H115 298 aa18.33■□□□□ 0.53
LSS-202ENST00000397728 MKNK2Q9HBH9 465 aa18.33■□□□□ 0.53
LSS-202ENST00000397728 TRIM22Q8IYM9 498 aa18.33■□□□□ 0.52
LSS-202ENST00000397728 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.52
LSS-202ENST00000397728 RABEP1Q15276 862 aa18.33■□□□□ 0.52
LSS-202ENST00000397728 IMMTQ16891 758 aaKnown RBP18.33■□□□□ 0.52
LSS-202ENST00000397728 CWF19L2Q2TBE0 894 aaKnown RBP18.33■□□□□ 0.52
LSS-202ENST00000397728 IQSEC3Q9UPP2 1182 aaPredicted RBP18.33■□□□□ 0.52
LSS-202ENST00000397728 ADCY10Q96PN6 1610 aa18.33■□□□□ 0.52
LSS-202ENST00000397728 NUCB2P80303 420 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 ALDH1L1O75891 902 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 MSNP26038 577 aaKnown RBP18.32■□□□□ 0.52
LSS-202ENST00000397728 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
LSS-202ENST00000397728 ABCC3O15438 1527 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 PRDM15P57071 1507 aaPredicted RBP18.32■□□□□ 0.52
LSS-202ENST00000397728 BAG6P46379 1132 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 SLF2Q8IX21 1173 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 JAKMIP1Q96N16 626 aaKnown RBP18.32■□□□□ 0.52
LSS-202ENST00000397728 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
LSS-202ENST00000397728 GOLIM4O00461 696 aa18.31■□□□□ 0.52
LSS-202ENST00000397728 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
LSS-202ENST00000397728 ARHGAP45Q92619 1136 aa18.31■□□□□ 0.52
LSS-202ENST00000397728 ZNF287Q9HBT7 754 aa18.31■□□□□ 0.52
LSS-202ENST00000397728 ECHDC1Q9NTX5 307 aa18.31■□□□□ 0.52
LSS-202ENST00000397728 IRS4O14654 1257 aaPredicted RBP18.3■□□□□ 0.52
LSS-202ENST00000397728 SLC52A2Q9HAB3 445 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
LSS-202ENST00000397728 DNAJC10Q8IXB1 793 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 VAMP4O75379 141 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 MCM2P49736 904 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 CCDC73Q6ZRK6 1079 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 PHAXQ9H814 394 aaKnown RBP18.3■□□□□ 0.52
LSS-202ENST00000397728 GOLGA6L19H0YKK7 550 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 A1BGP04217 495 aa18.3■□□□□ 0.52
LSS-202ENST00000397728 GCC2Q8IWJ2 1684 aa18.29■□□□□ 0.52
LSS-202ENST00000397728 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
LSS-202ENST00000397728 LDHCP07864 332 aa18.29■□□□□ 0.52
LSS-202ENST00000397728 PDCP20941 246 aa18.29■□□□□ 0.52
LSS-202ENST00000397728 SOGA3Q5TF21 947 aa18.29■□□□□ 0.52
LSS-202ENST00000397728 SPATA31E1Q6ZUB1 1445 aa18.29■□□□□ 0.52
LSS-202ENST00000397728 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
LSS-202ENST00000397728 HOOK1Q9UJC3 728 aaKnown RBP18.28■□□□□ 0.52
LSS-202ENST00000397728 GOLGA6L3A6NEY3 463 aa18.28■□□□□ 0.52
LSS-202ENST00000397728 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms