RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 PDZRN3Q9UPQ7 1066 aa23.7■■□□□ 1.38
EXOSC3-202ENST00000396521 MRC1P22897 1456 aa23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 COL15A1P39059 1388 aa23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 A0A087WZG4 1122 aa23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 DIAPH1O60610 1272 aaKnown RBP23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 LMNB1P20700 586 aa23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 TEX13AQ9BXU3 409 aaPredicted RBP23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 TJP1Q07157 1748 aa23.69■■□□□ 1.38
EXOSC3-202ENST00000396521 SCN11AQ9UI33 1791 aa23.68■■□□□ 1.38
EXOSC3-202ENST00000396521 SLC39A6Q13433 755 aa23.68■■□□□ 1.38
EXOSC3-202ENST00000396521 TTLL6Q8N841 843 aa23.68■■□□□ 1.38
EXOSC3-202ENST00000396521 SERPINB2P05120 415 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 HMOX1P09601 288 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 MTHFSDQ2M296 383 aaKnown RBP23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 TTC5Q8N0Z6 440 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 SMC1BQ8NDV3 1235 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 KLRG1Q96E93 195 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 RRAGCQ9HB90 399 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 ZBTB1Q9Y2K1 713 aa23.67■■□□□ 1.38
EXOSC3-202ENST00000396521 H0YIN7 160 aa23.66■■□□□ 1.38
EXOSC3-202ENST00000396521 KCPQ6ZWJ8 1503 aa23.65■■□□□ 1.38
EXOSC3-202ENST00000396521 JMYQ8N9B5 988 aa23.65■■□□□ 1.38
EXOSC3-202ENST00000396521 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
EXOSC3-202ENST00000396521 VEGFAP15692 232 aaPredicted RBP23.64■■□□□ 1.37
EXOSC3-202ENST00000396521 ADAMTS7Q9UKP4 1686 aa23.64■■□□□ 1.37
EXOSC3-202ENST00000396521 GLTPD2A6NH11 291 aa23.63■■□□□ 1.37
EXOSC3-202ENST00000396521 PER1O15534 1290 aaPredicted RBP23.63■■□□□ 1.37
EXOSC3-202ENST00000396521 EIF5P55010 431 aaKnown RBP23.63■■□□□ 1.37
EXOSC3-202ENST00000396521 BCL2L12Q9HB09 334 aa23.63■■□□□ 1.37
EXOSC3-202ENST00000396521 CANXP27824 592 aaKnown RBP23.62■■□□□ 1.37
EXOSC3-202ENST00000396521 TEFQ10587 303 aa23.62■■□□□ 1.37
EXOSC3-202ENST00000396521 C2CD5Q86YS7 1000 aa23.62■■□□□ 1.37
EXOSC3-202ENST00000396521 GAS2L2Q8NHY3 880 aa23.62■■□□□ 1.37
EXOSC3-202ENST00000396521 KIF7Q2M1P5 1343 aa23.61■■□□□ 1.37
EXOSC3-202ENST00000396521 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
EXOSC3-202ENST00000396521 PDE6BP35913 854 aa23.6■■□□□ 1.37
EXOSC3-202ENST00000396521 GNAT3A8MTJ3 354 aa23.59■■□□□ 1.37
EXOSC3-202ENST00000396521 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
EXOSC3-202ENST00000396521 ZNF790Q6PG37 636 aa23.59■■□□□ 1.37
EXOSC3-202ENST00000396521 BRIP1Q9BX63 1249 aa23.59■■□□□ 1.37
EXOSC3-202ENST00000396521 NPC1L1Q9UHC9 1359 aa23.59■■□□□ 1.37
EXOSC3-202ENST00000396521 IL6STP40189 918 aaPredicted RBP23.58■■□□□ 1.37
EXOSC3-202ENST00000396521 RASSF7Q02833 373 aa23.58■■□□□ 1.37
EXOSC3-202ENST00000396521 NRXN2Q9P2S2 1712 aa23.57■■□□□ 1.36
EXOSC3-202ENST00000396521 TNRC6CQ9HCJ0 1690 aaKnown RBP23.57■■□□□ 1.36
EXOSC3-202ENST00000396521 WDR90Q96KV7 1748 aa23.56■■□□□ 1.36
EXOSC3-202ENST00000396521 HEG1Q9ULI3 1381 aa23.56■■□□□ 1.36
EXOSC3-202ENST00000396521 CC2D1BQ5T0F9 858 aaKnown RBP23.56■■□□□ 1.36
EXOSC3-202ENST00000396521 ZNF496Q96IT1 587 aaPredicted RBP23.56■■□□□ 1.36
EXOSC3-202ENST00000396521 FMNL2Q96PY5 1086 aa23.55■■□□□ 1.36
EXOSC3-202ENST00000396521 CARMIL3Q8ND23 1372 aa23.54■■□□□ 1.36
EXOSC3-202ENST00000396521 BICDL1Q6ZP65 573 aa23.54■■□□□ 1.36
EXOSC3-202ENST00000396521 IL17REQ8NFR9 667 aa23.54■■□□□ 1.36
EXOSC3-202ENST00000396521 SBF1O95248 1867 aa23.53■■□□□ 1.36
EXOSC3-202ENST00000396521 NFKBIEO00221 500 aa23.53■■□□□ 1.36
EXOSC3-202ENST00000396521 U2SURPO15042 1029 aaKnown RBP23.53■■□□□ 1.36
EXOSC3-202ENST00000396521 SOGA3Q5TF21 947 aa23.53■■□□□ 1.36
EXOSC3-202ENST00000396521 TBC1D9BQ66K14 1250 aa23.53■■□□□ 1.36
EXOSC3-202ENST00000396521 SETDB2Q96T68 719 aa23.53■■□□□ 1.36
EXOSC3-202ENST00000396521 HTRA3P83110 453 aa23.52■■□□□ 1.36
EXOSC3-202ENST00000396521 ZNF622Q969S3 477 aaKnown RBP eCLIP23.52■■□□□ 1.36
EXOSC3-202ENST00000396521 PRELPP51888 382 aa23.51■■□□□ 1.35
EXOSC3-202ENST00000396521 PRR5LQ6MZQ0 368 aa23.51■■□□□ 1.35
EXOSC3-202ENST00000396521 CNKSR1Q969H4 720 aa23.51■■□□□ 1.35
EXOSC3-202ENST00000396521 LTBP3Q9NS15 1303 aa23.51■■□□□ 1.35
EXOSC3-202ENST00000396521 AFDNP55196 1824 aaKnown RBP23.5■■□□□ 1.35
EXOSC3-202ENST00000396521 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
EXOSC3-202ENST00000396521 TBC1D2BQ9UPU7 963 aa23.5■■□□□ 1.35
EXOSC3-202ENST00000396521 NPHP1O15259 732 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 ST5P78524 1137 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 STYK1Q6J9G0 422 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 CNBD1Q8NA66 436 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 UBR2Q8IWV8 1755 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 CEMIPQ8WUJ3 1361 aa23.49■■□□□ 1.35
EXOSC3-202ENST00000396521 DLEC1Q9Y238 1755 aa23.48■■□□□ 1.35
EXOSC3-202ENST00000396521 C21orf2O43822 256 aa23.48■■□□□ 1.35
EXOSC3-202ENST00000396521 CLEC4GQ6UXB4 293 aa23.48■■□□□ 1.35
EXOSC3-202ENST00000396521 ZNF330Q9Y3S2 320 aaPredicted RBP23.48■■□□□ 1.35
EXOSC3-202ENST00000396521 BTBD11A6QL63 1104 aa23.47■■□□□ 1.35
EXOSC3-202ENST00000396521 RGL2O15211 777 aa23.47■■□□□ 1.35
EXOSC3-202ENST00000396521 TAOK3Q9H2K8 898 aa23.47■■□□□ 1.35
EXOSC3-202ENST00000396521 CAMTA2O94983 1202 aa23.46■■□□□ 1.35
EXOSC3-202ENST00000396521 NUDCQ9Y266 331 aa23.46■■□□□ 1.35
EXOSC3-202ENST00000396521 COL3A1P02461 1466 aaPredicted RBP23.45■■□□□ 1.34
EXOSC3-202ENST00000396521 A1BGP04217 495 aa23.45■■□□□ 1.34
EXOSC3-202ENST00000396521 MASTLQ96GX5 879 aa23.45■■□□□ 1.34
EXOSC3-202ENST00000396521 ZNF652Q9Y2D9 606 aa23.45■■□□□ 1.34
EXOSC3-202ENST00000396521 SRGNP10124 158 aa23.44■■□□□ 1.34
EXOSC3-202ENST00000396521 COL13A1Q5TAT6 717 aaPredicted RBP23.44■■□□□ 1.34
EXOSC3-202ENST00000396521 DZIP3Q86Y13 1208 aaKnown RBP23.44■■□□□ 1.34
EXOSC3-202ENST00000396521 PCNTO95613 3336 aa23.43■■□□□ 1.34
EXOSC3-202ENST00000396521 POTECB2RU33 542 aa23.43■■□□□ 1.34
EXOSC3-202ENST00000396521 SNRPA1P09661 255 aaKnown RBP23.42■■□□□ 1.34
EXOSC3-202ENST00000396521 RTF1Q92541 710 aaKnown RBP23.42■■□□□ 1.34
EXOSC3-202ENST00000396521 IQCA1LA6NCM1 817 aa23.41■■□□□ 1.34
EXOSC3-202ENST00000396521 PRKAR2BP31323 418 aa23.41■■□□□ 1.34
EXOSC3-202ENST00000396521 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
EXOSC3-202ENST00000396521 HTATSF1O43719 755 aaKnown RBP23.4■■□□□ 1.34
EXOSC3-202ENST00000396521 CHADLQ6NUI6 762 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms