RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 MSANTD4Q8NCY6 345 aa9.39□□□□□ -0.91
SOX6-202ENST00000396356 CLIP2Q9UDT6 1046 aa9.39□□□□□ -0.91
SOX6-202ENST00000396356 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
SOX6-202ENST00000396356 LMBR1Q8WVP7 490 aa9.39□□□□□ -0.91
SOX6-202ENST00000396356 FERMT2Q96AC1 680 aa9.39□□□□□ -0.91
SOX6-202ENST00000396356 GLT8D2Q9H1C3 349 aa9.39□□□□□ -0.91
SOX6-202ENST00000396356 EIF5P55010 431 aaKnown RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 SPTY2D1Q68D10 685 aaPredicted RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 CEP112Q8N8E3 955 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 NAP1L4Q99733 375 aaKnown RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 TSNARE1Q96NA8 513 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 WDR78Q5VTH9 848 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 MAP2K1Q02750 393 aaPredicted RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 FSD2A1L4K1 749 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 ZFYP08048 801 aaPredicted RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 MPHOSPH8Q99549 860 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 STARD3NLO95772 234 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 ALDH3A1P30838 453 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 ACTN2P35609 894 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 CHD1LQ86WJ1 897 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 PAF1Q8N7H5 531 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 STRN4Q9NRL3 753 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 TCP11L2Q8N4U5 519 aa9.38□□□□□ -0.91
SOX6-202ENST00000396356 ZGPATQ8N5A5 531 aaKnown RBP9.38□□□□□ -0.91
SOX6-202ENST00000396356 RTEL1-TNFRSF6BF6WH68 1400 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 CCDC14Q49A88 953 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 NEUROD6Q96NK8 337 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 CEP126Q9P2H0 1117 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 CFAP43Q8NDM7 1665 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 PIP4K2BP78356 416 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 HYPKQ9NX55 129 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 NEBLO76041 1014 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
SOX6-202ENST00000396356 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 NAP1L3Q99457 506 aaPredicted RBP9.37□□□□□ -0.91
SOX6-202ENST00000396356 BMS1Q14692 1282 aaKnown RBP9.37□□□□□ -0.91
SOX6-202ENST00000396356 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 CCDC50Q8IVM0 306 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 CCDC102AQ96A19 550 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 KCNG1Q9UIX4 513 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 UHRF1BP1Q6BDS2 1440 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 IGHMBP2P38935 993 aaKnown RBP9.37□□□□□ -0.91
SOX6-202ENST00000396356 ANKRD24Q8TF21 1146 aa9.37□□□□□ -0.91
SOX6-202ENST00000396356 ZFYVE9O95405 1425 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 ATP5DP30049 168 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 GNAQP50148 359 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 MAP7Q14244 749 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 PDRG1Q9NUG6 133 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 ANKRD36BQ8N2N9 1353 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 SCAF11Q99590 1463 aaKnown RBP9.36□□□□□ -0.91
SOX6-202ENST00000396356 PPP2R1AP30153 589 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 IQCA1Q86XH1 822 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 CUL5Q93034 780 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 DNAJC21Q5F1R6 531 aaKnown RBP9.36□□□□□ -0.91
SOX6-202ENST00000396356 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 SEPT11Q9NVA2 429 aaKnown RBP9.36□□□□□ -0.91
SOX6-202ENST00000396356 SHANK2Q9UPX8 1470 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 CFAP74Q9C0B2 1584 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 PABPN1LA6NDY0 278 aaKnown RBP9.36□□□□□ -0.91
SOX6-202ENST00000396356 OPA1O60313 960 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 IKBKGQ9Y6K9 419 aa9.36□□□□□ -0.91
SOX6-202ENST00000396356 IKQ13123 557 aaPredicted RBP9.36□□□□□ -0.91
SOX6-202ENST00000396356 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.36□□□□□ -0.91
SOX6-202ENST00000396356 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
SOX6-202ENST00000396356 MCM4P33991 863 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 TSGA10Q9BZW7 698 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 CNNM2Q9H8M5 875 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 MINK1Q8N4C8 1332 aaPredicted RBP9.35□□□□□ -0.91
SOX6-202ENST00000396356 TERF1P54274 439 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 PPP2R5EQ16537 467 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 GSTO1P78417 241 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 CCDC155Q8N6L0 562 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 KCNG4Q8TDN1 519 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 MAP4K4O95819 1239 aaPredicted RBP9.35□□□□□ -0.91
SOX6-202ENST00000396356 NT5C2P49902 561 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 TEX14Q8IWB6 1497 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 DUOX2Q9NRD8 1548 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 FIBPO43427 364 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 LDHCP07864 332 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 SNX16P57768 344 aa9.35□□□□□ -0.91
SOX6-202ENST00000396356 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
SOX6-202ENST00000396356 TOP1P11387 765 aaKnown RBP9.34□□□□□ -0.91
SOX6-202ENST00000396356 ATP2A2P16615 1042 aaKnown RBP9.34□□□□□ -0.91
SOX6-202ENST00000396356 EIF2S2P20042 333 aaKnown RBP9.34□□□□□ -0.91
SOX6-202ENST00000396356 HSPA4P34932 840 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 CNNM1Q9NRU3 951 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 TCP11L1Q9NUJ3 509 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
SOX6-202ENST00000396356 PRPF40AO75400 957 aaKnown RBP9.34□□□□□ -0.91
SOX6-202ENST00000396356 UBE2HP62256 183 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 MAP3K12Q12852 859 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 IFFO1Q0D2I5 559 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 CASQ1P31415 396 aa9.34□□□□□ -0.91
SOX6-202ENST00000396356 AIDAQ96BJ3 306 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms