RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 AMIGO3Q86WK7 504 aa25.43■■□□□ 1.66
CDKN1B-202ENST00000396340 RUNDC1Q96C34 613 aa25.43■■□□□ 1.66
CDKN1B-202ENST00000396340 CHD4Q14839 1912 aa25.43■■□□□ 1.66
CDKN1B-202ENST00000396340 SOS1Q07889 1333 aaPredicted RBP25.42■■□□□ 1.66
CDKN1B-202ENST00000396340 GYS1P13807 737 aa25.41■■□□□ 1.66
CDKN1B-202ENST00000396340 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
CDKN1B-202ENST00000396340 COL15A1P39059 1388 aa25.41■■□□□ 1.66
CDKN1B-202ENST00000396340 MMP10P09238 476 aa25.4■■□□□ 1.66
CDKN1B-202ENST00000396340 IL6STP40189 918 aaPredicted RBP25.4■■□□□ 1.66
CDKN1B-202ENST00000396340 RIPK4P57078 832 aa25.4■■□□□ 1.66
CDKN1B-202ENST00000396340 ANP32CO43423 234 aa25.39■■□□□ 1.66
CDKN1B-202ENST00000396340 NARFQ9UHQ1 456 aa25.39■■□□□ 1.66
CDKN1B-202ENST00000396340 KIF13BQ9NQT8 1826 aa25.39■■□□□ 1.65
CDKN1B-202ENST00000396340 GRIN3BO60391 1043 aa25.38■■□□□ 1.65
CDKN1B-202ENST00000396340 GPR162Q16538 588 aa25.38■■□□□ 1.65
CDKN1B-202ENST00000396340 TMPOP42166 694 aaKnown RBP25.37■■□□□ 1.65
CDKN1B-202ENST00000396340 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
CDKN1B-202ENST00000396340 KDM3BQ7LBC6 1761 aa25.36■■□□□ 1.65
CDKN1B-202ENST00000396340 TGFB2P61812 414 aa25.36■■□□□ 1.65
CDKN1B-202ENST00000396340 DCTN1Q14203 1278 aa25.36■■□□□ 1.65
CDKN1B-202ENST00000396340 RGL2O15211 777 aa25.35■■□□□ 1.65
CDKN1B-202ENST00000396340 CANXP27824 592 aaKnown RBP25.35■■□□□ 1.65
CDKN1B-202ENST00000396340 EIF5P55010 431 aaKnown RBP25.35■■□□□ 1.65
CDKN1B-202ENST00000396340 LAMB4A4D0S4 1761 aa25.34■■□□□ 1.65
CDKN1B-202ENST00000396340 ADAMTS8Q9UP79 889 aa25.34■■□□□ 1.65
CDKN1B-202ENST00000396340 CALD1Q05682 793 aaKnown RBP25.33■■□□□ 1.65
CDKN1B-202ENST00000396340 SMIM5Q71RC9 77 aa25.33■■□□□ 1.65
CDKN1B-202ENST00000396340 USPL1Q5W0Q7 1092 aa25.31■■□□□ 1.64
CDKN1B-202ENST00000396340 ZNF652Q9Y2D9 606 aa25.3■■□□□ 1.64
CDKN1B-202ENST00000396340 TSPYL4Q9UJ04 414 aa25.29■■□□□ 1.64
CDKN1B-202ENST00000396340 KCNQ3O43525 872 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 TM4SF1P30408 202 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 FKBP8Q14318 412 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 CLEC4GQ6UXB4 293 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 NLGN2Q8NFZ4 835 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 SRP68Q9UHB9 627 aaKnown RBP25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 USP16Q9Y5T5 823 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 ERBB4Q15303 1308 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 C10orf71Q711Q0 1435 aa25.28■■□□□ 1.64
CDKN1B-202ENST00000396340 SCN7AQ01118 1682 aa25.27■■□□□ 1.64
CDKN1B-202ENST00000396340 YY1P25490 414 aa25.27■■□□□ 1.64
CDKN1B-202ENST00000396340 PDZRN3Q9UPQ7 1066 aa25.27■■□□□ 1.64
CDKN1B-202ENST00000396340 GIGYF1O75420 1035 aaPredicted RBP25.26■■□□□ 1.63
CDKN1B-202ENST00000396340 EIF4A1P60842 406 aaKnown RBP25.26■■□□□ 1.63
CDKN1B-202ENST00000396340 PELP1Q8IZL8 1130 aaKnown RBP25.26■■□□□ 1.63
CDKN1B-202ENST00000396340 CHMP4AQ9BY43 222 aa25.26■■□□□ 1.63
CDKN1B-202ENST00000396340 ZNF330Q9Y3S2 320 aaPredicted RBP25.26■■□□□ 1.63
CDKN1B-202ENST00000396340 A1BGP04217 495 aa25.25■■□□□ 1.63
CDKN1B-202ENST00000396340 CCDC146Q8IYE0 955 aa25.25■■□□□ 1.63
CDKN1B-202ENST00000396340 DZIP3Q86Y13 1208 aaKnown RBP25.24■■□□□ 1.63
CDKN1B-202ENST00000396340 BCORQ6W2J9 1755 aa25.23■■□□□ 1.63
CDKN1B-202ENST00000396340 POLRMTO00411 1230 aaKnown RBP25.23■■□□□ 1.63
CDKN1B-202ENST00000396340 NEUROD2Q15784 382 aa25.23■■□□□ 1.63
CDKN1B-202ENST00000396340 NCBP3Q53F19 620 aaKnown RBP25.23■■□□□ 1.63
CDKN1B-202ENST00000396340 AFDNP55196 1824 aaKnown RBP25.23■■□□□ 1.63
CDKN1B-202ENST00000396340 NRXN2Q9P2S2 1712 aa25.23■■□□□ 1.63
CDKN1B-202ENST00000396340 CARMIL3Q8ND23 1372 aa25.22■■□□□ 1.63
CDKN1B-202ENST00000396340 MIS18AQ9NYP9 233 aa25.22■■□□□ 1.63
CDKN1B-202ENST00000396340 NFIXQ14938 502 aa25.21■■□□□ 1.63
CDKN1B-202ENST00000396340 SETDB2Q96T68 719 aa25.21■■□□□ 1.63
CDKN1B-202ENST00000396340 THUMPD2Q9BTF0 503 aaKnown RBP25.21■■□□□ 1.63
CDKN1B-202ENST00000396340 TBC1D2BQ9UPU7 963 aa25.2■■□□□ 1.62
CDKN1B-202ENST00000396340 N4BP2Q86UW6 1770 aaPredicted RBP25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 CHL1O00533 1208 aa25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 SERPINB2P05120 415 aa25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 HOXB7P09629 217 aa25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 CFAP44Q96MT7 982 aa25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 MRS2Q9HD23 443 aa25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 BRCA1P38398 1863 aaKnown RBP25.19■■□□□ 1.62
CDKN1B-202ENST00000396340 PXDNLA1KZ92 1463 aa25.18■■□□□ 1.62
CDKN1B-202ENST00000396340 DDR1Q08345 913 aa25.18■■□□□ 1.62
CDKN1B-202ENST00000396340 PIM2Q9P1W9 311 aa25.18■■□□□ 1.62
CDKN1B-202ENST00000396340 TRIM35Q9UPQ4 493 aa25.18■■□□□ 1.62
CDKN1B-202ENST00000396340 RRP7AQ9Y3A4 280 aaKnown RBP25.18■■□□□ 1.62
CDKN1B-202ENST00000396340 ERVV-1B6SEH8 477 aa25.17■■□□□ 1.62
CDKN1B-202ENST00000396340 NPHP1O15259 732 aa25.17■■□□□ 1.62
CDKN1B-202ENST00000396340 CAMTA2O94983 1202 aa25.17■■□□□ 1.62
CDKN1B-202ENST00000396340 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
CDKN1B-202ENST00000396340 BCL2L12Q9HB09 334 aa25.17■■□□□ 1.62
CDKN1B-202ENST00000396340 ARFGEF1Q9Y6D6 1849 aa25.16■■□□□ 1.62
CDKN1B-202ENST00000396340 APAF1O14727 1248 aa25.16■■□□□ 1.62
CDKN1B-202ENST00000396340 GNAI1P63096 354 aa25.16■■□□□ 1.62
CDKN1B-202ENST00000396340 KIF6Q6ZMV9 814 aa25.16■■□□□ 1.62
CDKN1B-202ENST00000396340 KIAA1551Q9HCM1 1747 aa25.16■■□□□ 1.62
CDKN1B-202ENST00000396340 PDE6BP35913 854 aa25.15■■□□□ 1.62
CDKN1B-202ENST00000396340 PRAMEF22A3QJZ6 481 aa25.14■■□□□ 1.62
CDKN1B-202ENST00000396340 YBX3P16989 372 aaKnown RBP eCLIP25.14■■□□□ 1.62
CDKN1B-202ENST00000396340 CCDC27Q2M243 656 aa25.14■■□□□ 1.62
CDKN1B-202ENST00000396340 IFT57Q9NWB7 429 aa25.14■■□□□ 1.62
CDKN1B-202ENST00000396340 ST5P78524 1137 aa25.13■■□□□ 1.61
CDKN1B-202ENST00000396340 TBC1D9BQ66K14 1250 aa25.13■■□□□ 1.61
CDKN1B-202ENST00000396340 BRIP1Q9BX63 1249 aa25.13■■□□□ 1.61
CDKN1B-202ENST00000396340 A0A0G2JLW4 131 aa25.12■■□□□ 1.61
CDKN1B-202ENST00000396340 NBPF26B4DH59 902 aa25.12■■□□□ 1.61
CDKN1B-202ENST00000396340 NBPF10Q6P3W6 841 aaKnown RBP25.12■■□□□ 1.61
CDKN1B-202ENST00000396340 NBPF15Q8N660 670 aa25.12■■□□□ 1.61
CDKN1B-202ENST00000396340 LAS1LQ9Y4W2 734 aaKnown RBP25.12■■□□□ 1.61
CDKN1B-202ENST00000396340 NUP98P52948 1817 aa25.12■■□□□ 1.61
CDKN1B-202ENST00000396340 DLEC1Q9Y238 1755 aa25.11■■□□□ 1.61
CDKN1B-202ENST00000396340 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms